; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008970 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008970
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlarge ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome locationscaffold7:30732433..30739984
RNA-Seq ExpressionSpg008970
SyntenySpg008970
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003772 - Large ribosomal RNA subunit accumulation protein YceD


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]7.2e-12776.21Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   KSKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

XP_004136166.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic [Cucumis sativus]3.0e-12575.73Show/hide
Query:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD
        M ATFPTSS+VSSSH NEF+ V   KSKG  SF+SHFR     VPW+ ++NIQ SLG D CI +KST++KCVKPTYQS FEDNSIIT+WEDQEGD EEMD
Subjt:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD

Query:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF
        SPWEGA+IYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK KKLRLDGIVKTVITLNCY           
Subjt:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF

Query:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL
                       CCEPAPEC+FSNFSIIL+E+PIEEP+VINMGIISG+DMFKT +GNSDEDDEELIDLDDQLYFP + KEIDISKNIRDILHLEIT+
Subjt:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL

Query:  NAICDPGCK
        N ICDPGCK
Subjt:  NAICDPGCK

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]1.6e-12675.88Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   +SKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]1.6e-12675.88Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   +SKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

XP_038897008.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida]2.8e-13179.61Show/hide
Query:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD
        MSATFPTSS+VSSSH NEF+KV  LKSKGN SF+SH     C+VPWKFM+NIQ SLG D+CIMLKSTS+KCVKPTYQS FEDNSIIT+WED +GD EEM 
Subjt:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD

Query:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF
        SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRV K VKD+PFGTPVQIS+DVTRKEKKLRLDGIVKTVITLNCYR          
Subjt:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF

Query:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL
                       CCE APEC+FSNFSIIL+E+PIEEP+VINMGIISGQDMFKTYDGNSDEDDEEL+DLDDQLYFPL+EKEIDISKNIRDILHLEIT+
Subjt:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL

Query:  NAICDPGCK
        NAICDPGCK
Subjt:  NAICDPGCK

TrEMBL top hitse value%identityAlignment
A0A0A0KAY7 Uncharacterized protein1.5e-12575.73Show/hide
Query:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD
        M ATFPTSS+VSSSH NEF+ V   KSKG  SF+SHFR     VPW+ ++NIQ SLG D CI +KST++KCVKPTYQS FEDNSIIT+WEDQEGD EEMD
Subjt:  MSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMD

Query:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF
        SPWEGA+IYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK KKLRLDGIVKTVITLNCY           
Subjt:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVF

Query:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL
                       CCEPAPEC+FSNFSIIL+E+PIEEP+VINMGIISG+DMFKT +GNSDEDDEELIDLDDQLYFP + KEIDISKNIRDILHLEIT+
Subjt:  AFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITL

Query:  NAICDPGCK
        N ICDPGCK
Subjt:  NAICDPGCK

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X27.8e-12775.88Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   +SKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X17.8e-12775.88Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   +SKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

A0A5A7VN29 Uncharacterized protein3.5e-12776.21Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   KSKGN SFNSHFR     VPW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

A0A5D3D2J4 Uncharacterized protein9.5e-12575.24Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE
        FKM ATFPTSS+VSSSH  EF+ V   KSKGN SFNS  R      PW+FM+NIQ SLG D CI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGD EE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQIS+DVTRK+KKLRLDGIVKTVITLNCYR        
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDE

Query:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI
                         CCEPAPEC+FSNFSI+L+E+PIEEP+VINMGIISGQD+FKT +GNSDEDDEE +DLDDQLYFP V+KEIDISKNIRDILHLEI
Subjt:  VFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEI

Query:  TLNAICDPGCK
        T+N IC+PGCK
Subjt:  TLNAICDPGCK

SwissProt top hitse value%identityAlignment
A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic1.1e-4246.12Show/hide
Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR-VTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWD
        + SPWEGAV+Y+R+A+V H+EY +TLERLGL  LS+  S++RA+ +GL   T         TPV +S+DVTR+  +LRLDGIV+TVITL C+R       
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR-VTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWD

Query:  EVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFK-------TYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNI
                          C EPAP+ +F+NFS++L EDP+EE    ++G I  +D  K         DG+ D      ID DD+L+FP  +KEIDISK+I
Subjt:  EVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFK-------TYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNI

Query:  RDILHLEITLNAICDPGCK
        RD++HLEITL+A+C+P CK
Subjt:  RDILHLEITLNAICDPGCK

Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic1.3e-0939.84Show/hide
Query:  EAARTIPFALQDASMATSDFMNNVALADLDPATAKLAISFLGPFLSAFSFLFIVRIVMS-----------------------------------------
        EAA T     Q  S+  S+ + N++LADLDP TAKLAI  LGP LSAF FLFI+RIVMS                                         
Subjt:  EAARTIPFALQDASMATSDFMNNVALADLDPATAKLAISFLGPFLSAFSFLFIVRIVMS-----------------------------------------

Query:  ------CFLNEILLGPQGMLVLLSQQSI
               FL+EIL+GPQG+LVL+SQQ +
Subjt:  ------CFLNEILLGPQGMLVLLSQQSI

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic6.9e-6456.22Show/hide
Query:  QSFFEDNSIITEWEDQEGDFEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRL
        +SF E ++I  +WEDQE + E+  SPWEG+V+Y+RNASV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKD+P GTPVQ+S+DV RK+KKLRL
Subjt:  QSFFEDNSIITEWEDQEGDFEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRL

Query:  DGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLY
        DGIV+TVITL C R                         C E   E +FSNFS++L E+P+EEP+VI++G   G D  K    + D++D+  ID +D+L+
Subjt:  DGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLY

Query:  FPLVEKEIDISKNIRDILHLEITLNAICDPGCK
        FP   KEIDISK+IRD++HLEIT+ AICD  CK
Subjt:  FPLVEKEIDISKNIRDILHLEITLNAICDPGCK

Arabidopsis top hitse value%identityAlignment
AT3G19810.1 Protein of unknown function (DUF177)4.9e-6556.22Show/hide
Query:  QSFFEDNSIITEWEDQEGDFEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRL
        +SF E ++I  +WEDQE + E+  SPWEG+V+Y+RNASV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKD+P GTPVQ+S+DV RK+KKLRL
Subjt:  QSFFEDNSIITEWEDQEGDFEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRL

Query:  DGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLY
        DGIV+TVITL C R                         C E   E +FSNFS++L E+P+EEP+VI++G   G D  K    + D++D+  ID +D+L+
Subjt:  DGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISGQDMFKTYDGNSDEDDEELIDLDDQLY

Query:  FPLVEKEIDISKNIRDILHLEITLNAICDPGCK
        FP   KEIDISK+IRD++HLEIT+ AICD  CK
Subjt:  FPLVEKEIDISKNIRDILHLEITLNAICDPGCK

AT5G36120.1 cofactor assembly, complex C (B6F)9.1e-1139.84Show/hide
Query:  EAARTIPFALQDASMATSDFMNNVALADLDPATAKLAISFLGPFLSAFSFLFIVRIVMS-----------------------------------------
        EAA T     Q  S+  S+ + N++LADLDP TAKLAI  LGP LSAF FLFI+RIVMS                                         
Subjt:  EAARTIPFALQDASMATSDFMNNVALADLDPATAKLAISFLGPFLSAFSFLFIVRIVMS-----------------------------------------

Query:  ------CFLNEILLGPQGMLVLLSQQSI
               FL+EIL+GPQG+LVL+SQQ +
Subjt:  ------CFLNEILLGPQGMLVLLSQQSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCTGCTGCTCCTCTCTCAGCTCCATTCGATTGGACAAGGGTCTTTTAAGAGGATTTGACAATGCTGGTGTAGTTGTGGCTGAAATGTTTCTTGTTAT
CTATTCATTACCTTGTTTCCTTGGACAGAAAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTGCAGATTCCAAGCAATCCAATGTAGCTCATCTTTGTTGAGTTCTT
TTCCCTCTTCCAAGATTCATCTGTCATTGGCCTATGCCAACCCTCCATTAAAGCCAGCTGCTGCATATGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCA
ATGGCTACCTCTGATTTCATGAACAATGTGGCCCTGGCTGACCTCGACCCAGCAACAGCAAAGCTCGCAATCAGCTTTCTGGGGCCGTTTCTCTCGGCGTTTTCGTTTTT
GTTTATTGTGAGAATAGTAATGTCCTGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGATGCTTGTCCTCCTTTCTCAGCAGAGCATCTGCATAATTTCCACTATTT
TCGCGAACACAGTGTTTAAGATGTCAGCTACATTCCCCACCTCATCCATAGTTTCATCTTCTCATTTCAATGAATTTGTTAAGGTTTGCTGCTTGAAATCCAAAGGGAAT
GCTTCTTTCAATTCGCATTTCCGCTTTGTTGGATGTAAAGTTCCATGGAAATTTATGAAAAATATCCAGACAAGTTTGGGAAGTGACACATGTATTATGCTGAAATCTAC
TTCCCTAAAGTGTGTGAAACCTACTTACCAGTCCTTTTTTGAAGACAATTCAATAATTACTGAATGGGAGGATCAAGAAGGGGACTTTGAAGAGATGGACTCACCTTGGG
AAGGAGCAGTTATTTACAAGAGAAACGCTTCAGTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGA
GCATCCAAGATGGGACTACGTGTAACGAAGGCTGTGAAAGATTTTCCCTTTGGAACGCCTGTTCAAATCTCTCTTGATGTTACAAGGAAAGAGAAAAAGTTGAGGCTTGA
TGGGATTGTCAAAACTGTCATCACTCTCAATTGCTATAGATCTGTCATTTTGAACTGGGATGAAGTATTTGCTTTCTCCAGTCCTACATCAACTTCTTTGTTTAGCATGT
TTGTGTGTTGTGAACCTGCTCCTGAGTGTGTTTTCTCAAATTTCTCAATTATACTAAACGAAGACCCGATTGAAGAGCCTGAGGTCATAAATATGGGGATCATCAGCGGC
CAGGATATGTTCAAGACATATGATGGAAATAGTGATGAAGATGATGAAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTCGTAGAGAAAGAAATAGATATATC
AAAGAACATCAGAGACATTTTGCATCTGGAAATTACTTTGAATGCGATATGCGATCCAGGATGCAAAGTGTTTAAGATGTCAGCTACATTCCCCACCTCATCCATAGTTT
CATCTTCTCATTTCAATGAATTTGTTAAGGTTTGCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATTCACATTTCCGCTTTGTTGGATGTAAAGTTCCATGGAAATTT
ATGAAAAATATCCAGACAAGTTTGGGAAGTGACACATGTATTATGCTGAAATCTACTTCCCTAAAGTGTGTGAAACCTACTTACCAGTCCTTTTTTGAAGACAATTCAAT
AATTACTGAATGGGAGGATCAAGAAGGGGACTTTGAAGAGATGGACTCACCTTGGGCAGGAGCAGTTATTTACAAGAGAAACGCTTCAGTTTCTCATGTGGAGTACTGCA
CAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCCAAGATGGGACTACGTGTAACGAAGGCTGTGAAAGATTTTCCCTTTGGA
ACGCCTGTTCAAATCTCTCTTGATGTTACAAGGAAAGAGAAAAAGTTGAGGCTTTATGGGATTGTCAAAACTGTCATCACTCTCAATTGCTATAGATCTGTCATTTTGAA
CTGGGATGAAGTATTTGCTTTCTCCAGTCCTACATCAACTTCTTTGTTTAGCATGTTT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCTGCTGCTCCTCTCTCAGCTCCATTCGATTGGACAAGGGTCTTTTAAGAGGATTTGACAATGCTGGTGTAGTTGTGGCTGAAATGTTTCTTGTTAT
CTATTCATTACCTTGTTTCCTTGGACAGAAAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTGCAGATTCCAAGCAATCCAATGTAGCTCATCTTTGTTGAGTTCTT
TTCCCTCTTCCAAGATTCATCTGTCATTGGCCTATGCCAACCCTCCATTAAAGCCAGCTGCTGCATATGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCA
ATGGCTACCTCTGATTTCATGAACAATGTGGCCCTGGCTGACCTCGACCCAGCAACAGCAAAGCTCGCAATCAGCTTTCTGGGGCCGTTTCTCTCGGCGTTTTCGTTTTT
GTTTATTGTGAGAATAGTAATGTCCTGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGATGCTTGTCCTCCTTTCTCAGCAGAGCATCTGCATAATTTCCACTATTT
TCGCGAACACAGTGTTTAAGATGTCAGCTACATTCCCCACCTCATCCATAGTTTCATCTTCTCATTTCAATGAATTTGTTAAGGTTTGCTGCTTGAAATCCAAAGGGAAT
GCTTCTTTCAATTCGCATTTCCGCTTTGTTGGATGTAAAGTTCCATGGAAATTTATGAAAAATATCCAGACAAGTTTGGGAAGTGACACATGTATTATGCTGAAATCTAC
TTCCCTAAAGTGTGTGAAACCTACTTACCAGTCCTTTTTTGAAGACAATTCAATAATTACTGAATGGGAGGATCAAGAAGGGGACTTTGAAGAGATGGACTCACCTTGGG
AAGGAGCAGTTATTTACAAGAGAAACGCTTCAGTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGA
GCATCCAAGATGGGACTACGTGTAACGAAGGCTGTGAAAGATTTTCCCTTTGGAACGCCTGTTCAAATCTCTCTTGATGTTACAAGGAAAGAGAAAAAGTTGAGGCTTGA
TGGGATTGTCAAAACTGTCATCACTCTCAATTGCTATAGATCTGTCATTTTGAACTGGGATGAAGTATTTGCTTTCTCCAGTCCTACATCAACTTCTTTGTTTAGCATGT
TTGTGTGTTGTGAACCTGCTCCTGAGTGTGTTTTCTCAAATTTCTCAATTATACTAAACGAAGACCCGATTGAAGAGCCTGAGGTCATAAATATGGGGATCATCAGCGGC
CAGGATATGTTCAAGACATATGATGGAAATAGTGATGAAGATGATGAAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTCGTAGAGAAAGAAATAGATATATC
AAAGAACATCAGAGACATTTTGCATCTGGAAATTACTTTGAATGCGATATGCGATCCAGGATGCAAAGTGTTTAAGATGTCAGCTACATTCCCCACCTCATCCATAGTTT
CATCTTCTCATTTCAATGAATTTGTTAAGGTTTGCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATTCACATTTCCGCTTTGTTGGATGTAAAGTTCCATGGAAATTT
ATGAAAAATATCCAGACAAGTTTGGGAAGTGACACATGTATTATGCTGAAATCTACTTCCCTAAAGTGTGTGAAACCTACTTACCAGTCCTTTTTTGAAGACAATTCAAT
AATTACTGAATGGGAGGATCAAGAAGGGGACTTTGAAGAGATGGACTCACCTTGGGCAGGAGCAGTTATTTACAAGAGAAACGCTTCAGTTTCTCATGTGGAGTACTGCA
CAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCCAAGATGGGACTACGTGTAACGAAGGCTGTGAAAGATTTTCCCTTTGGA
ACGCCTGTTCAAATCTCTCTTGATGTTACAAGGAAAGAGAAAAAGTTGAGGCTTTATGGGATTGTCAAAACTGTCATCACTCTCAATTGCTATAGATCTGTCATTTTGAA
CTGGGATGAAGTATTTGCTTTCTCCAGTCCTACATCAACTTCTTTGTTTAGCATGTTT
Protein sequenceShow/hide protein sequence
MAAAACCSSLSSIRLDKGLLRGFDNAGVVVAEMFLVIYSLPCFLGQKGFKYHPQRNPNCRFQAIQCSSSLLSSFPSSKIHLSLAYANPPLKPAAAYEAARTIPFALQDAS
MATSDFMNNVALADLDPATAKLAISFLGPFLSAFSFLFIVRIVMSCFLNEILLGPQGMLVLLSQQSICIISTIFANTVFKMSATFPTSSIVSSSHFNEFVKVCCLKSKGN
ASFNSHFRFVGCKVPWKFMKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSR
ASKMGLRVTKAVKDFPFGTPVQISLDVTRKEKKLRLDGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMFVCCEPAPECVFSNFSIILNEDPIEEPEVINMGIISG
QDMFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCKVFKMSATFPTSSIVSSSHFNEFVKVCCLKSKGNASFNSHFRFVGCKVPWKF
MKNIQTSLGSDTCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDFEEMDSPWAGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKAVKDFPFG
TPVQISLDVTRKEKKLRLYGIVKTVITLNCYRSVILNWDEVFAFSSPTSTSLFSMF