; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008990 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008990
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionINO80 complex subunit C
Genome locationscaffold8:17930352..17956280
RNA-Seq ExpressionSpg008990
SyntenySpg008990
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0031011 - Ino80 complex (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR013272 - Vps72/YL1, C-terminal
IPR029525 - INO80 complex, subunit Ies6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441777.1 PREDICTED: INO80 complex subunit C isoform X1 [Cucumis melo]1.1e-6295.93Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENY+NYSPDEPNYVNIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

XP_022144563.1 INO80 complex subunit C isoform X1 [Momordica charantia]5.7e-6497.56Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHN+SPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANAD+FK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAVIL
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

XP_022937916.1 INO80 complex subunit C isoform X1 [Cucurbita moschata]1.3e-6397.56Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYS DEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

XP_031736376.1 INO80 complex subunit C isoform X1 [Cucumis sativus]1.4e-6292.97Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        ME EVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVILSVIID
        VIR+LPNEYVQRYLAMRNAAV+L  + D
Subjt:  VIRALPNEYVQRYLAMRNAAVILSVIID

XP_038889510.1 INO80 complex subunit C isoform X1 [Benincasa hispida]1.7e-6396.75Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

TrEMBL top hitse value%identityAlignment
A0A0A0LJN6 YL1_C domain-containing protein6.8e-6395.93Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        ME EVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

A0A1S3B479 INO80 complex subunit C isoform X15.2e-6395.93Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENY+NYSPDEPNYVNIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

A0A6J1CRZ9 INO80 complex subunit C isoform X12.8e-6497.56Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHN+SPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANAD+FK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAVIL
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

A0A6J1FBP9 INO80 complex subunit C isoform X16.2e-6497.56Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYS DEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

A0A6J1HLV4 INO80 complex subunit C isoform X16.2e-6497.56Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYS DEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
        VIR+LPNEYVQRYLAMRNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL

SwissProt top hitse value%identityAlignment
P32617 Chromatin-remodeling complex subunit IES65.1e-0737.88Show/hide
Query:  YVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK-VIRALPNEYVQRYLAMRNAAVIL
        Y ++E+PPS+ P KK CD+TG +  Y  P   +RY NA+I++ +++ +     Q YL +R A  +L
Subjt:  YVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK-VIRALPNEYVQRYLAMRNAAVIL

Q5BJY3 INO80 complex subunit C4.3e-1442.86Show/hide
Query:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL
        + R WK+LKQIL AE    +  ++PNY +I++PPS  P KK  D++G  A Y DP++ LR++  + F  IR LP++ V  YL +R A  I+
Subjt:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL

Q6PI98 INO80 complex subunit C4.3e-1442.86Show/hide
Query:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL
        + R WK+LKQIL +E    +  ++PNY +I++PPS  P KK  D++G  A Y DP++ LR++  + F  IR LP++ V  YLA+R A  I+
Subjt:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL

Q8BHA0 INO80 complex subunit C1.1e-1445.05Show/hide
Query:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL
        + R WK+LKQIL AE    +  ++PNY +I++PPS  P KK  DI+G  A Y DP++ LR++  + F  IR LP++ V  YLA+R A  I+
Subjt:  RGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL

Q9UTE8 Chromatin-remodeling complex subunit ies61.4e-1241.67Show/hide
Query:  PKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL
        P  +++ R  ++L+QI+Q +   N  P + +Y +IE+PPS+ P  K CD+TG  A Y DP+T LRY N +I+ +IR LP+   Q YL +R++ V+L
Subjt:  PKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYVQRYLAMRNAAVIL

Arabidopsis top hitse value%identityAlignment
AT4G38495.1 CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).1.7e-4263.41Show/hide
Query:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK
        ME E++EA++V+ + L+FK+ Q YEKYPK QS  R WKHLKQILQAEN+ +  PD P YVNIESPPS  PCK++CDITGYEAPY DPRT LRYANA +F+
Subjt:  MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFK

Query:  VIRALPNEYVQRYLAMRNAAVIL
         +R+L ++ V +YL++RNAAV+L
Subjt:  VIRALPNEYVQRYLAMRNAAVIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCGGAGGTCATAGAAGCAGAGTTAGTGTTGCCGACCCACCTGAATTTCAAGAGAATTCAAATGTACGAAAAGTACCCAAAAGGCCAATCCAGAGGCAGGCACTG
GAAGCATCTGAAGCAAATTCTTCAAGCCGAGAACTACCACAACTACTCCCCTGATGAACCCAACTATGTTAATATTGAGTCACCTCCCTCAATGCATCCATGCAAGAAAA
TTTGTGATATAACAGGATATGAGGCACCATACTATGATCCCAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGAGCACTTCCTAATGAGTATGTT
CAGAGGTATTTGGCCATGAGAAATGCAGCAGTAATTTTAAGCGTGATTATTGATATTCTACAACTTGCGGTGCGTATGCATTTCTTCAAACAGGGTTCATTGGTGGTTGA
AAAATTTACTACTCATTCTGGAAGTTATGTGGATGCTGTGATGAAGAATGTGAAAGAGCAGCAAAGTATGAAGACTCCTTTTGTCAAGATCTCAAAGGATTCTTCAAGAA
GCTCTGAGATTTTCACTCTTCCTTTCATCCAAGAAACTCCGATTTTCACCAAGGATTTAAACAACATTGATTTGCTCGATAGTTTGCATTTATTGCAACAACCTCGTGAT
AAAGCCTTGGAAACTCAAGGGACGTCTATTGAAGAGTCACTAGCTTTGAATATTCTCATCAATTTTCAAGAGGATAATGAAGTTGTTTCATCAAATCAGTTGATTATTGG
AAAGAGGAAAAGAAAGGAGAAGTCTTTGCTTACAGAGATTTCTTTGCTTGATAATAAATCTGAGTTGGGTCCTCTTTCTGGGCAAGTGTTTGCTGCCCGGTCTCTAGTCA
AAGGTGACCTACTTGATCTTTTCTTAAAGGAAGAAAGGAATTTGATACAGAATTCTGATGTGTTTGATATTCAATCAATGATCTATGCTGTGAAAATATACGTCGTTTCT
ATTGTCGATTTGCTTGGCGTCTTTTTTGTTCTTGATATGAACCGAAAGCACAAAGCTTTATTCAACTTTCTATGCCTCAATGCTGCATTTGTCCAGACCATAATTGTAGA
GCACCTATTTGAGTCAATACCCCCGATTTGTAGTGATGCCCAGTTCCAGAATCTTCATGGTGTAAGGCTCGCGCCTCATGCATTCGAAATTCTTGCCAGGGAGGAATTGC
TGAAGAAAGGCATAAGATTTCCATGGTGTTATGCTGCCAAAATTCTCTCTCAAAGTCATAAGCTCAAAACCTCTCAAAGCTTGAAACCCAAGCACCTTCCCTTCCAATTC
CCATCACTAGAGGATCCCACAATCCGTTTCAAAGGTTTGGATGATGAGTTGGACCTTGGTGAGGAAGAGGAGAGCTTCGAGGAGGAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCGGAGGTCATAGAAGCAGAGTTAGTGTTGCCGACCCACCTGAATTTCAAGAGAATTCAAATGTACGAAAAGTACCCAAAAGGCCAATCCAGAGGCAGGCACTG
GAAGCATCTGAAGCAAATTCTTCAAGCCGAGAACTACCACAACTACTCCCCTGATGAACCCAACTATGTTAATATTGAGTCACCTCCCTCAATGCATCCATGCAAGAAAA
TTTGTGATATAACAGGATATGAGGCACCATACTATGATCCCAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGAGCACTTCCTAATGAGTATGTT
CAGAGGTATTTGGCCATGAGAAATGCAGCAGTAATTTTAAGCGTGATTATTGATATTCTACAACTTGCGGTGCGTATGCATTTCTTCAAACAGGGTTCATTGGTGGTTGA
AAAATTTACTACTCATTCTGGAAGTTATGTGGATGCTGTGATGAAGAATGTGAAAGAGCAGCAAAGTATGAAGACTCCTTTTGTCAAGATCTCAAAGGATTCTTCAAGAA
GCTCTGAGATTTTCACTCTTCCTTTCATCCAAGAAACTCCGATTTTCACCAAGGATTTAAACAACATTGATTTGCTCGATAGTTTGCATTTATTGCAACAACCTCGTGAT
AAAGCCTTGGAAACTCAAGGGACGTCTATTGAAGAGTCACTAGCTTTGAATATTCTCATCAATTTTCAAGAGGATAATGAAGTTGTTTCATCAAATCAGTTGATTATTGG
AAAGAGGAAAAGAAAGGAGAAGTCTTTGCTTACAGAGATTTCTTTGCTTGATAATAAATCTGAGTTGGGTCCTCTTTCTGGGCAAGTGTTTGCTGCCCGGTCTCTAGTCA
AAGGTGACCTACTTGATCTTTTCTTAAAGGAAGAAAGGAATTTGATACAGAATTCTGATGTGTTTGATATTCAATCAATGATCTATGCTGTGAAAATATACGTCGTTTCT
ATTGTCGATTTGCTTGGCGTCTTTTTTGTTCTTGATATGAACCGAAAGCACAAAGCTTTATTCAACTTTCTATGCCTCAATGCTGCATTTGTCCAGACCATAATTGTAGA
GCACCTATTTGAGTCAATACCCCCGATTTGTAGTGATGCCCAGTTCCAGAATCTTCATGGTGTAAGGCTCGCGCCTCATGCATTCGAAATTCTTGCCAGGGAGGAATTGC
TGAAGAAAGGCATAAGATTTCCATGGTGTTATGCTGCCAAAATTCTCTCTCAAAGTCATAAGCTCAAAACCTCTCAAAGCTTGAAACCCAAGCACCTTCCCTTCCAATTC
CCATCACTAGAGGATCCCACAATCCGTTTCAAAGGTTTGGATGATGAGTTGGACCTTGGTGAGGAAGAGGAGAGCTTCGAGGAGGAACCCTAG
Protein sequenceShow/hide protein sequence
MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRALPNEYV
QRYLAMRNAAVILSVIIDILQLAVRMHFFKQGSLVVEKFTTHSGSYVDAVMKNVKEQQSMKTPFVKISKDSSRSSEIFTLPFIQETPIFTKDLNNIDLLDSLHLLQQPRD
KALETQGTSIEESLALNILINFQEDNEVVSSNQLIIGKRKRKEKSLLTEISLLDNKSELGPLSGQVFAARSLVKGDLLDLFLKEERNLIQNSDVFDIQSMIYAVKIYVVS
IVDLLGVFFVLDMNRKHKALFNFLCLNAAFVQTIIVEHLFESIPPICSDAQFQNLHGVRLAPHAFEILAREELLKKGIRFPWCYAAKILSQSHKLKTSQSLKPKHLPFQF
PSLEDPTIRFKGLDDELDLGEEEESFEEEP