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Spg008993 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008993
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold8:19139982..19141405
RNA-Seq ExpressionSpg008993
SyntenySpg008993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.5e-1345.36Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K  LLPTTH  TVS+DR+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-1346.39Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.1e-1346.39Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH  TVS+DR+LL +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]3.6e-1244.33Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH   VS++ VLL +++L   SI+VG+II  EI  C  +K G LFFP+ IT +C+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]3.6e-1237.62Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTL---IDKGIIDTPNLARL
        AN W++FI+  L PTTHDS++S ++++L + ++   +I+VGK++   I  C +++ GKLFFP+ I  L  +AGVP   DD+ +    +K  ID   +++L
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTL---IDKGIIDTPNLARL

Query:  Q
        +
Subjt:  Q

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.7e-1345.36Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K  LLPTTH  TVS+DR+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)9.1e-1446.39Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

A0A2P5CEY2 Uncharacterized protein5.3e-1446.39Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH  TVS+DR+LL +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

A0A2P5CPE8 Uncharacterized protein2.2e-1245.36Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH  TVS++RVLL +++L   SI+VG+II  EI     +K G LFFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

A0A2P5CXU3 Uncharacterized protein (Fragment)1.7e-1244.33Show/hide
Query:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL
        A  W  F+K RLLPTTH   VS++ VLL +++L   SI+VG+II  EI  C  +K G LFFP+ IT +C+ A  P   ++  L + G ID   +AR+
Subjt:  ANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACAAGAGGAAGAAAGAAAAGAGACAATGAGGAAGAAGAAGTACTAGTTACCCCTAAGAATATAGTAGAGGATATTGCTGCCGAGGCAGTTGGGGAAGGCAA
TCCAAAAGAACCTGAAAGACAAAACCCTGAGCAGATTGACCCGATAGTTGAGGATACGCCAGAAGTTCAACAAGAACAGACAGAGGAAGTTCAAGAAAAGCAGACGGAGG
ATGCGCAAGAAGGACGAACAGAGGTTGTGCAGGAAAAAGATAATGAGCAGGAGGTGCGAAAGCAGGAGGCTCGTGTTGAGGTTATCATGCCGAAGAATGCAGAGAGAGAA
GAACAGGAGAAAAAGGAGGCCGAAGACAAAGCAAGAGAGGAAGTAGAGAAAAAGGCGGAGGAAGACAATTTGCCCAAACAAAGGGAAGACAAGGGCAAAGGTATTGCTAA
AGCATCACCGGACCCTGAAGATAGTGAAGCAGAGGAGCCATGGTTACCGTATAATCGCTTCATCAACAATCTTGCCAGAGCAAAGTATGCTGAGATGCTGAGAAGAGACT
TTTTGTTTGAACGAGGATTTGGAGATGATTTGCCACGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAA
TTAAATGCGGCTGTCCGAGAGAGTGAGGCCAATACGTGGATGAGCTTCATTAAGCTGCGTTTACTGCCAACAACTCACGATTCAACGGTGTCTCGAGACCGGGTACTGCT
TGCGTTTGCTATTCTTTGTTCAATGAGTATTGATGTGGGCAAAATAATTTCTGCTGAGATTTTTGATTGCTGGAGGAAAAAGGATGGGAAATTGTTTTTCCCGAATACTA
TCACAATGTTATGCCAGAGGGCAGGGGTTCCAGTGAATGATGATGATGTGACTTTGATAGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAGAGGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACAAGAGGAAGAAAGAAAAGAGACAATGAGGAAGAAGAAGTACTAGTTACCCCTAAGAATATAGTAGAGGATATTGCTGCCGAGGCAGTTGGGGAAGGCAA
TCCAAAAGAACCTGAAAGACAAAACCCTGAGCAGATTGACCCGATAGTTGAGGATACGCCAGAAGTTCAACAAGAACAGACAGAGGAAGTTCAAGAAAAGCAGACGGAGG
ATGCGCAAGAAGGACGAACAGAGGTTGTGCAGGAAAAAGATAATGAGCAGGAGGTGCGAAAGCAGGAGGCTCGTGTTGAGGTTATCATGCCGAAGAATGCAGAGAGAGAA
GAACAGGAGAAAAAGGAGGCCGAAGACAAAGCAAGAGAGGAAGTAGAGAAAAAGGCGGAGGAAGACAATTTGCCCAAACAAAGGGAAGACAAGGGCAAAGGTATTGCTAA
AGCATCACCGGACCCTGAAGATAGTGAAGCAGAGGAGCCATGGTTACCGTATAATCGCTTCATCAACAATCTTGCCAGAGCAAAGTATGCTGAGATGCTGAGAAGAGACT
TTTTGTTTGAACGAGGATTTGGAGATGATTTGCCACGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAA
TTAAATGCGGCTGTCCGAGAGAGTGAGGCCAATACGTGGATGAGCTTCATTAAGCTGCGTTTACTGCCAACAACTCACGATTCAACGGTGTCTCGAGACCGGGTACTGCT
TGCGTTTGCTATTCTTTGTTCAATGAGTATTGATGTGGGCAAAATAATTTCTGCTGAGATTTTTGATTGCTGGAGGAAAAAGGATGGGAAATTGTTTTTCCCGAATACTA
TCACAATGTTATGCCAGAGGGCAGGGGTTCCAGTGAATGATGATGATGTGACTTTGATAGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAGAGGACATAG
Protein sequenceShow/hide protein sequence
MAKTRGRKKRDNEEEEVLVTPKNIVEDIAAEAVGEGNPKEPERQNPEQIDPIVEDTPEVQQEQTEEVQEKQTEDAQEGRTEVVQEKDNEQEVRKQEARVEVIMPKNAERE
EQEKKEAEDKAREEVEKKAEEDNLPKQREDKGKGIAKASPDPEDSEAEEPWLPYNRFINNLARAKYAEMLRRDFLFERGFGDDLPRFLRTGIANHGWSFNEMVVAPSNDQ
LNAAVRESEANTWMSFIKLRLLPTTHDSTVSRDRVLLAFAILCSMSIDVGKIISAEIFDCWRKKDGKLFFPNTITMLCQRAGVPVNDDDVTLIDKGIIDTPNLARLQRT