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Spg009001 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009001
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor MYB34
Genome locationscaffold8:16907318..16910316
RNA-Seq ExpressionSpg009001
SyntenySpg009001
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]4.5e-1663.16Show/hide
Query:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL
        VQ+  SNLE +MKEYMAR D  +       RN E QLGQ+A E+KNRPQ + P  TE+P REGKEQCKAVTLRSGL
Subjt:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]2.2e-1564.38Show/hide
Query:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG
        SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A ++KNRPQ TLPS TE P R+GKE CKAVTLRSG
Subjt:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]2.2e-1564.38Show/hide
Query:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG
        SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A ++KNRPQ TLPS TE P R+GKE CKAVTLRSG
Subjt:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]2.2e-1555.68Show/hide
Query:  PPNAISSPCCEICVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG
        PP     P       SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A ++KNRPQ TLPS TE P R+GKE CKA+TLRSG
Subjt:  PPNAISSPCCEICVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]2.2e-1564.38Show/hide
Query:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG
        SQ S+LE+LM++YMA+ND  +       RNLEVQLGQ+A ++KNRPQ TLPS TE P R+GKE CKAVTLRSG
Subjt:  SQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248973.1e-1544.8Show/hide
Query:  NCGREQNGGRIPPVPPIKAIHSMMMGMTMNNQANIAPPNAISSPCCEICVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQAT
        N G+ Q   + P VPP +    +       NQ    PP           +Q+  SNLE +MKEYMAR D  +       RN   QLG +A E+KNRPQ +
Subjt:  NCGREQNGGRIPPVPPIKAIHSMMMGMTMNNQANIAPPNAISSPCCEICVQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQAT

Query:  LPSKTEIPHREGKEQCKAVTLRSGL
         P  TE+P REGKEQCKAVTLRSGL
Subjt:  LPSKTEIPHREGKEQCKAVTLRSGL

A0A6J1DYG0 uncharacterized protein LOC1110257642.2e-1663.16Show/hide
Query:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL
        VQ+  SNLE +MKEYMAR D  +       RN E QLGQ+A E+KNRPQ + P  TE+P REGKEQCKAVTLRSGL
Subjt:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL

A0A6J1DZC3 uncharacterized protein LOC1110244492.5e-1237.5Show/hide
Query:  PQNCGREQNGGRIPPVPPIKAIHSMMMGMTMNNQANIAPPNAISSPCCEICVQSQESNLETLMKEYMARNDVAVRNLEVQLGQIAQEIKNRPQATLPSKT
        PQ   +++N  +     P++   S M  M      ++     I +   +  +Q   +  +T +++Y +RND A+RNLE Q+GQ+A E+KNRP+ TLPS T
Subjt:  PQNCGREQNGGRIPPVPPIKAIHSMMMGMTMNNQANIAPPNAISSPCCEICVQSQESNLETLMKEYMARNDVAVRNLEVQLGQIAQEIKNRPQATLPSKT

Query:  EIPHREGKEQCKAVTLRSGL
        E P  EG+E CK +T RSGL
Subjt:  EIPHREGKEQCKAVTLRSGL

A0A6J1E110 uncharacterized protein LOC1110254241.9e-1256.58Show/hide
Query:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL
        VQ+  SNLE  MKEYMAR D  +       RN E QLG +A  +KNRPQ +    TE+P  EGKE CKAVTLRSGL
Subjt:  VQSQESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL

A0A6J1H7K8 uncharacterized protein LOC1114611672.9e-1359.15Show/hide
Query:  ESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG
        E++LE+L+KEYMA+NDV +       RNLEVQ+GQ+A E++NRP   LPS TE+P REG EQC+A+ LRSG
Subjt:  ESNLETLMKEYMARNDVAV-------RNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACTGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTAGAAAAACTGAGACAGTTGAAGTTAAAGCTTTTTACATACAAGAGTTTCCAATGGAACCTCC
TGGAGTCGATCCTCAAGTTGATCCACAGAATTGTGGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCACCGATCAAGGCTATCCATAGCATGATGATGGGCATGA
CCATGAACAATCAAGCCAACATAGCCCCTCCCAATGCTATTTCTTCTCCATGTTGTGAAATTTGTGTGCAAAGTCAAGAGTCAAATCTAGAGACTCTTATGAAGGAATAC
ATGGCAAGAAACGATGTTGCAGTAAGGAATTTGGAAGTACAACTTGGACAAATTGCTCAGGAGATAAAGAATAGACCACAAGCGACGTTGCCTAGCAAGACCGAGATCCC
TCACAGAGAAGGAAAGGAGCAATGCAAGGCAGTGACCCTAAGAAGTGGATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGACTGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTAGAAAAACTGAGACAGTTGAAGTTAAAGCTTTTTACATACAAGAGTTTCCAATGGAACCTCC
TGGAGTCGATCCTCAAGTTGATCCACAGAATTGTGGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCACCGATCAAGGCTATCCATAGCATGATGATGGGCATGA
CCATGAACAATCAAGCCAACATAGCCCCTCCCAATGCTATTTCTTCTCCATGTTGTGAAATTTGTGTGCAAAGTCAAGAGTCAAATCTAGAGACTCTTATGAAGGAATAC
ATGGCAAGAAACGATGTTGCAGTAAGGAATTTGGAAGTACAACTTGGACAAATTGCTCAGGAGATAAAGAATAGACCACAAGCGACGTTGCCTAGCAAGACCGAGATCCC
TCACAGAGAAGGAAAGGAGCAATGCAAGGCAGTGACCCTAAGAAGTGGATTATAA
Protein sequenceShow/hide protein sequence
MRLHFWEGKMKCDRISRKTETVEVKAFYIQEFPMEPPGVDPQVDPQNCGREQNGGRIPPVPPIKAIHSMMMGMTMNNQANIAPPNAISSPCCEICVQSQESNLETLMKEY
MARNDVAVRNLEVQLGQIAQEIKNRPQATLPSKTEIPHREGKEQCKAVTLRSGL