; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009018 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009018
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description1-deoxy-D-xylulose 5-phosphate synthase family protein
Genome locationscaffold8:17051330..17055709
RNA-Seq ExpressionSpg009018
SyntenySpg009018
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.8e-1233.99Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ
        +P++HDST+S +R+ +LYCI+KG +IN+G +I +EI  C  +  GKLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ

Query:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERD
           P R+   +P   T  T   P  E L+       Q+ E L+T+W Y RERD
Subjt:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERD

MCI09484.1 hypothetical protein [Trifolium medium]1.1e-1133.11Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKR--VGKLFFGSLITQLCQRVKI-VSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKAS
        MP+TH+ T++  R++LL+CI+ G +IN+G II +EI++C  K+   G L+F  LIT+LC++  + VSG+DE    F+PT          Q +++   K +
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKR--VGKLFFGSLITQLCQRVKI-VSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKAS

Query:  TSQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAY
        T +           P Q  P    S ++ + A+   +  + R+N++TYWA+
Subjt:  TSQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAY

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.0e-1130.86Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKL-QQNSLQRKDKASTS
        +P+TH  T+S DR++LLY ++ G  IN+G +I  EI +C  ++ G LFF SLITQLC+  +     +EE+      ID   + ++ Q+   +   + STS
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKL-QQNSLQRKDKASTS

Query:  QATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ---LDQIRENLRTYWAYARERDEAIRE
        + T  S S                 S+     Y     L    +  + +WAY++ERD A+++
Subjt:  QATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ---LDQIRENLRTYWAYARERDEAIRE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-0929.11Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ
        +P+TH   +S DR++LL+ ++ G  IN+G +I  EI +C  ++ G LFF SLIT+LC+    +   +EE+      ID   + ++ Q       +  T  
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ

Query:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERDEAIRE
           PS S  A+              +AL     Q +   +  + +WAY++ERD A+++
Subjt:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERDEAIRE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.2e-1036.89Show/hide
Query:  PSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDE---ERHFFKPTIDLPLIGKLQQNSLQRKDKAST
        P+THDS+ISV++++LLYC++ G  IN+G ++ + IL C ++R GKLFF SLI +L  +  +    D+   +    K TID+  + KL++ S + ++    
Subjt:  PSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDE---ERHFFKPTIDLPLIGKLQQNSLQRKDKAST

Query:  SQA
        ++A
Subjt:  SQA

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-0928.4Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQN--SLQRKDKAST
        +P+TH  T+S DR++LL+ ++ G  IN+G +I  EI +C  ++ G LFF SLIT+LC+  +     +EE+      ID   + ++ Q   +   +  +S+
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQN--SLQRKDKAST

Query:  SQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ--LDQIRENLRTYWAYARERDEAIRE
          AT  S        Q         S + +   +    L    +  + +WAY++ERD A+++
Subjt:  SQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ--LDQIRENLRTYWAYARERDEAIRE

A0A2P5CEY2 Uncharacterized protein9.5e-1230.86Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKL-QQNSLQRKDKASTS
        +P+TH  T+S DR++LLY ++ G  IN+G +I  EI +C  ++ G LFF SLITQLC+  +     +EE+      ID   + ++ Q+   +   + STS
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKL-QQNSLQRKDKASTS

Query:  QATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ---LDQIRENLRTYWAYARERDEAIRE
        + T  S S                 S+     Y     L    +  + +WAY++ERD A+++
Subjt:  QATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQ---LDQIRENLRTYWAYARERDEAIRE

A0A2P5DXM3 Uncharacterized protein5.2e-1029.11Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ
        +P+TH   +S DR++LL+ ++ G  IN+G +I  EI +C  ++ G LFF SLIT+LC+    +   +EE+      ID   + ++ Q       +  T  
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ

Query:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERDEAIRE
           PS S  A+              +AL     Q +   +  + +WAY++ERD A+++
Subjt:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERDEAIRE

A0A392PCH7 Uncharacterized protein5.6e-1233.11Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKR--VGKLFFGSLITQLCQRVKI-VSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKAS
        MP+TH+ T++  R++LL+CI+ G +IN+G II +EI++C  K+   G L+F  LIT+LC++  + VSG+DE    F+PT          Q +++   K +
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKR--VGKLFFGSLITQLCQRVKI-VSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKAS

Query:  TSQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAY
        T +           P Q  P    S ++ + A+   +  + R+N++TYWA+
Subjt:  TSQATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAY

A0A7J6FZ22 Uncharacterized protein8.6e-1333.99Show/hide
Query:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ
        +P++HDST+S +R+ +LYCI+KG +IN+G +I +EI  C  +  GKLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQ

Query:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERD
           P R+   +P   T  T   P  E L+       Q+ E L+T+W Y RERD
Subjt:  ATPPSRSNMASPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCACCCACGATAGCACCATCTCAGTAGATAGGGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATCAGGGAGGAGATTCT
ATCCTGTGGAAGGAAAAGAGTAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATAGTTTCGGGAAAGGACGAGGAGCGTCATTTCTTCA
AGCCAACCATTGACCTGCCCTTGATCGGGAAGCTTCAACAGAATAGCCTCCAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCATCTAGGTCGAACATGGCT
TCTCCATTCCAGCATACTCCTTTTACAGGGCCTTCACCGTCATCTGAAGCCCTAGCCATTGCCTACCGTCAGCTAGATCAAATCAGGGAAAACCTGAGGACTTATTGGGC
ATATGCAAGGGAGAGGGATGAAGCCATTCGAGAGTTCTACCTCTCTATCGCCCCGAGTATTGCTCCGGAAAACAGAGGAAAAACTGGAATGAAAAACAGAGGCAGTTCCG
AGTCTACCGCAAGTCCCTCTGTCGCACCAGCTGTCGATTGGAGCCCAGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCCGCATGCTGGATTTAATGAGATGGTG
GTGGCACCATCTAATGACCAATTGAACGCGGCTGTCAGGGAGGTTGGTATTGAAGGGGCCAAATGGAGGTTGTCGAAGACGGAGAAGCGCACGTTCCAGGCAGCTTACTT
GAAGAGTGAGGCTAACACATGTAGGGCAGGGGTGTCCACGAGTCCCGAGGATGTTCTTCTACTTGATAAGGGGATAATAGACATGTCCAATTTGGCTCGGCTTCCTACAT
GCCAAGCCAGTAGGCAAGAGTATGCCGAGAGGCAGGCTCAAACCTACTGGACTTATGCTAAAAGGAGGGATGCCACACCTAGGAGGGCTTTGCAATCAAACTTCTCAAAA
CCTTATCAAGTCTTCCCTGTTTTCTCCGATGACCTGTTTAATCCCTGGATTCTACCGCCGCCAGTAGAAAGAGAGGAAGAGGAGGAAAATGAGCAGGGTCAAGAGGATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCACCCACGATAGCACCATCTCAGTAGATAGGGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATCAGGGAGGAGATTCT
ATCCTGTGGAAGGAAAAGAGTAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATAGTTTCGGGAAAGGACGAGGAGCGTCATTTCTTCA
AGCCAACCATTGACCTGCCCTTGATCGGGAAGCTTCAACAGAATAGCCTCCAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCATCTAGGTCGAACATGGCT
TCTCCATTCCAGCATACTCCTTTTACAGGGCCTTCACCGTCATCTGAAGCCCTAGCCATTGCCTACCGTCAGCTAGATCAAATCAGGGAAAACCTGAGGACTTATTGGGC
ATATGCAAGGGAGAGGGATGAAGCCATTCGAGAGTTCTACCTCTCTATCGCCCCGAGTATTGCTCCGGAAAACAGAGGAAAAACTGGAATGAAAAACAGAGGCAGTTCCG
AGTCTACCGCAAGTCCCTCTGTCGCACCAGCTGTCGATTGGAGCCCAGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCCGCATGCTGGATTTAATGAGATGGTG
GTGGCACCATCTAATGACCAATTGAACGCGGCTGTCAGGGAGGTTGGTATTGAAGGGGCCAAATGGAGGTTGTCGAAGACGGAGAAGCGCACGTTCCAGGCAGCTTACTT
GAAGAGTGAGGCTAACACATGTAGGGCAGGGGTGTCCACGAGTCCCGAGGATGTTCTTCTACTTGATAAGGGGATAATAGACATGTCCAATTTGGCTCGGCTTCCTACAT
GCCAAGCCAGTAGGCAAGAGTATGCCGAGAGGCAGGCTCAAACCTACTGGACTTATGCTAAAAGGAGGGATGCCACACCTAGGAGGGCTTTGCAATCAAACTTCTCAAAA
CCTTATCAAGTCTTCCCTGTTTTCTCCGATGACCTGTTTAATCCCTGGATTCTACCGCCGCCAGTAGAAAGAGAGGAAGAGGAGGAAAATGAGCAGGGTCAAGAGGATTG
A
Protein sequenceShow/hide protein sequence
MPSTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILSCGRKRVGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLPLIGKLQQNSLQRKDKASTSQATPPSRSNMA
SPFQHTPFTGPSPSSEALAIAYRQLDQIRENLRTYWAYARERDEAIREFYLSIAPSIAPENRGKTGMKNRGSSESTASPSVAPAVDWSPGAINSLFNLQDFPHAGFNEMV
VAPSNDQLNAAVREVGIEGAKWRLSKTEKRTFQAAYLKSEANTCRAGVSTSPEDVLLLDKGIIDMSNLARLPTCQASRQEYAERQAQTYWTYAKRRDATPRRALQSNFSK
PYQVFPVFSDDLFNPWILPPPVEREEEEENEQGQED