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Spg009037 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009037
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold8:17879128..17882855
RNA-Seq ExpressionSpg009037
SyntenySpg009037
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40067.1 conserved hypothetical protein [Ricinus communis]1.5e-1451.43Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEG
        MC+ V+CKQC K SW GCG HLV LY  +EKG HC C+ WPGVV+P+E   D + PK + + P ++   G
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEG

KAG6605256.1 hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2775.64Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPG-VVVPSEDAADMKTPKSSTANPKSSVPEGKTVVKQA
        MCYLV+CK CNKTSWKGCG+HL DLY R+EKG HCTCRPWPG VVVP +D+ADMKT   S AN KSSVPEGKT+ K+A
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPG-VVVPSEDAADMKTPKSSTANPKSSVPEGKTVVKQA

KAG7035219.1 hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2674.36Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPG-VVVPSEDAADMKTPKSSTANPKSSVPEGKTVVKQA
        MCYLV+CK CNKTSWKGCG+HL DLY R+EKG HCTCRPWPG VVVP +D+ADMKT   S AN KSSVP+GKT+ K+A
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPG-VVVPSEDAADMKTPKSSTANPKSSVPEGKTVVKQA

KGN62035.1 hypothetical protein Csa_006238 [Cucumis sativus]2.1e-1663.01Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEGKTV
        MC LV CK C+K +WKGCG HL  LYK VEKG HC C PWPGVVVP ED  D  T K S     SSV  GKTV
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEGKTV

RQO90457.1 hypothetical protein POPTR_005G130750 [Populus trichocarpa]3.1e-1560.71Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP
        MCY V+CKQC K SW+GCG+HL  LY  ++KG HC C+ WPGVVVP+E+ A  +TP
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP

TrEMBL top hitse value%identityAlignment
A0A0A0LJK5 Uncharacterized protein1.0e-1663.01Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEGKTV
        MC LV CK C+K +WKGCG HL  LYK VEKG HC C PWPGVVVP ED  D  T K S     SSV  GKTV
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEGKTV

A0A3N7EY41 Uncharacterized protein1.5e-1560.71Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP
        MCY V+CKQC K SW+GCG+HL  LY  ++KG HC C+ WPGVVVP+E+ A  +TP
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP

A0A3N7F5W7 Uncharacterized protein1.3e-1460.71Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP
        MCY V CKQCNK SW GCG+HL  +Y  +EKG HCTC+PWPGVV+ +E+ A  + P
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP

B9S8R4 Uncharacterized protein7.3e-1551.43Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEG
        MC+ V+CKQC K SW GCG HLV LY  +EKG HC C+ WPGVV+P+E   D + PK + + P ++   G
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEG

U5G557 Uncharacterized protein1.3e-1460.71Show/hide
Query:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP
        MCY V CKQCNK SW GCG+HL  +Y  +EKG HCTC+PWPGVV+ +E+ A  + P
Subjt:  MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTATCTTGTGCAGTGCAAGCAGTGCAATAAGACCTCATGGAAGGGCTGTGGCGACCACCTTGTTGATCTCTACAAGCGAGTAGAAAAGGGAAACCACTGCACCTG
CCGCCCTTGGCCGGGCGTCGTCGTGCCATCGGAAGATGCCGCCGACATGAAGACACCAAAATCATCGACTGCAAACCCGAAATCGTCTGTCCCAGAAGGTAAGACAGTTG
TTAAGCAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTATCTTGTGCAGTGCAAGCAGTGCAATAAGACCTCATGGAAGGGCTGTGGCGACCACCTTGTTGATCTCTACAAGCGAGTAGAAAAGGGAAACCACTGCACCTG
CCGCCCTTGGCCGGGCGTCGTCGTGCCATCGGAAGATGCCGCCGACATGAAGACACCAAAATCATCGACTGCAAACCCGAAATCGTCTGTCCCAGAAGGTAAGACAGTTG
TTAAGCAAGCTTAG
Protein sequenceShow/hide protein sequence
MCYLVQCKQCNKTSWKGCGDHLVDLYKRVEKGNHCTCRPWPGVVVPSEDAADMKTPKSSTANPKSSVPEGKTVVKQA