; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009056 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009056
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold8:18459658..18461112
RNA-Seq ExpressionSpg009056
SyntenySpg009056
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026036.1 uncharacterized protein E6C27_scaffold581G00210 [Cucumis melo var. makuwa]2.5e-0827.05Show/hide
Query:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---
        AKH +YL+EG+Q L+     L S PK P K                   G +N GK IH+   G+ LS   + SQS++ D H KR K+S+K S+ ++   
Subjt:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---

Query:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W
               +FFD                G       PE+         P+ A AM                                             W
Subjt:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W

Query:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV
        ES++QKI+RT  +++  LE E  KIF  I  + ++SLD L+E+V
Subjt:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV

KAA0041943.1 hypothetical protein E6C27_scaffold67G003650 [Cucumis melo var. makuwa]1.1e-0829.77Show/hide
Query:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPS---------------------
        +HG Y ++ I  LV SA P PS+PKLPK  G+N GGK IHL E       + +++  D S SS SD HWKR  K  K S                     
Subjt:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPS---------------------

Query:  ---------------VCEDEFFDGVPSAS---QFPELPAPLA--------------------------ALAMWESIQQKIVRTSVDKIPRLEQETSKIFH
                        C +E    V S     ++ ELP   +                          A  M E IQ KI++T  + IPRL  E + +  
Subjt:  ---------------VCEDEFFDGVPSAS---QFPELPAPLA--------------------------ALAMWESIQQKIVRTSVDKIPRLEQETSKIFH

Query:  VIFETCASSLDPLKE
         I +  A  L PL+E
Subjt:  VIFETCASSLDPLKE

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]2.5e-0844.76Show/hide
Query:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPA
        KHG Y E+    LV SA P PS+P+LPK  G+N GGK I L E       E + +  D S SS SD HWKRH K  K  V  D       SA + P++P 
Subjt:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPA

Query:  PLAAL
        PL+ L
Subjt:  PLAAL

KAA0048575.1 uncharacterized protein E6C27_scaffold61G002130 [Cucumis melo var. makuwa]4.1e-1144.44Show/hide
Query:  MVEFSGDGGAKYFNDFEARVHIHKAKHGNY-----LEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKK
        MVEFSG+GG KY+ + EA +HIHK K   +      EEG + LV + +P P++ KLP + G NN  K IH+    +  SK  + SQS++ D HWKR K+
Subjt:  MVEFSGDGGAKYFNDFEARVHIHKAKHGNY-----LEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKK

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]2.3e-0938.62Show/hide
Query:  MVEFSGDGGAKYFNDFEARVHI-----------------HKAKHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFE---PGEFLSKDDDGS
        M  FSG+GG+ YF ++EAR  I                 H+  HG Y E+    LV SA P PS+P+L K  G+N GGK I L E   P       +  S
Subjt:  MVEFSGDGGAKYFNDFEARVHI-----------------HKAKHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFE---PGEFLSKDDDGS

Query:  QSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPAPLAAL
         SS SD HWKR  K  K  V  D       SA + P++P PL+ L
Subjt:  QSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPAPLAAL

TrEMBL top hitse value%identityAlignment
A0A5A7SJR1 Uncharacterized protein1.2e-0827.05Show/hide
Query:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---
        AKH +YL+EG+Q L+     L S PK P K                   G +N GK IH+   G+ LS   + SQS++ D H KR K+S+K S+ ++   
Subjt:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---

Query:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W
               +FFD                G       PE+         P+ A AM                                             W
Subjt:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W

Query:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV
        ES++QKI+RT  +++  LE E  KIF  I  + ++SLD L+E+V
Subjt:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV

A0A5A7U349 PMD domain-containing protein1.1e-0938.62Show/hide
Query:  MVEFSGDGGAKYFNDFEARVHI-----------------HKAKHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFE---PGEFLSKDDDGS
        M  FSG+GG+ YF ++EAR  I                 H+  HG Y E+    LV SA P PS+P+L K  G+N GGK I L E   P       +  S
Subjt:  MVEFSGDGGAKYFNDFEARVHI-----------------HKAKHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFE---PGEFLSKDDDGS

Query:  QSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPAPLAAL
         SS SD HWKR  K  K  V  D       SA + P++P PL+ L
Subjt:  QSSSSDHHWKRHKKSNKPSVCEDEFFDGVPSASQFPELPAPLAAL

A0A5A7U4M3 Uncharacterized protein2.0e-1144.44Show/hide
Query:  MVEFSGDGGAKYFNDFEARVHIHKAKHGNY-----LEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKK
        MVEFSG+GG KY+ + EA +HIHK K   +      EEG + LV + +P P++ KLP + G NN  K IH+    +  SK  + SQS++ D HWKR K+
Subjt:  MVEFSGDGGAKYFNDFEARVHIHKAKHGNY-----LEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKK

A0A5D3D2V2 Uncharacterized protein5.5e-0929.77Show/hide
Query:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPS---------------------
        +HG Y ++ I  LV SA P PS+PKLPK  G+N GGK IHL E       + +++  D S SS SD HWKR  K  K S                     
Subjt:  KHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEP-----GEFLSKDDDGSQSSSSDHHWKRHKKSNKPS---------------------

Query:  ---------------VCEDEFFDGVPSAS---QFPELPAPLA--------------------------ALAMWESIQQKIVRTSVDKIPRLEQETSKIFH
                        C +E    V S     ++ ELP   +                          A  M E IQ KI++T  + IPRL  E + +  
Subjt:  ---------------VCEDEFFDGVPSAS---QFPELPAPLA--------------------------ALAMWESIQQKIVRTSVDKIPRLEQETSKIFH

Query:  VIFETCASSLDPLKE
         I +  A  L PL+E
Subjt:  VIFETCASSLDPLKE

A0A5D3DHK0 Uncharacterized protein1.2e-0827.05Show/hide
Query:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---
        AKH +YL+EG+Q L+     L S PK P K                   G +N GK IH+   G+ LS   + SQS++ D H KR K+S+K S+ ++   
Subjt:  AKHGNYLEEGIQKLVGSASPLPSKPKLPKK------------------VGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCED---

Query:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W
               +FFD                G       PE+         P+ A AM                                             W
Subjt:  -------EFFD----------------GVPSASQFPEL-------PAPLAALAM---------------------------------------------W

Query:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV
        ES++QKI+RT  +++  LE E  KIF  I  + ++SLD L+E+V
Subjt:  ESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTTGAGTTTTCTGGCGATGGTGGGGCTAAGTACTTTAATGATTTTGAAGCCCGTGTACATATTCACAAAGCTAAGCATGGGAATTATCTTGAAGAAGGCATACA
AAAGTTGGTGGGTAGTGCTTCTCCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAATAATAATGGAGGTAAAAGGATTCACCTGTTTGAACCTGGTGAGTTTC
TTTCTAAAGATGATGATGGTAGTCAGAGCAGTAGCAGTGATCATCATTGGAAAAGGCATAAAAAGTCCAATAAACCATCAGTATGTGAAGATGAATTTTTTGATGGGGTT
CCTAGCGCATCACAATTTCCTGAGCTCCCTGCACCATTGGCTGCCCTTGCCATGTGGGAGAGCATACAACAGAAGATCGTGCGCACTTCCGTCGACAAGATACCTCGTCT
TGAACAAGAGACGTCCAAAATATTTCATGTGATTTTTGAGACCTGTGCATCCAGCTTGGACCCTCTTAAAGAAATTGTAACGAAGGGTACACTTCATCAACAACATTTGC
AAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGTTGAGTTTTCTGGCGATGGTGGGGCTAAGTACTTTAATGATTTTGAAGCCCGTGTACATATTCACAAAGCTAAGCATGGGAATTATCTTGAAGAAGGCATACA
AAAGTTGGTGGGTAGTGCTTCTCCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAATAATAATGGAGGTAAAAGGATTCACCTGTTTGAACCTGGTGAGTTTC
TTTCTAAAGATGATGATGGTAGTCAGAGCAGTAGCAGTGATCATCATTGGAAAAGGCATAAAAAGTCCAATAAACCATCAGTATGTGAAGATGAATTTTTTGATGGGGTT
CCTAGCGCATCACAATTTCCTGAGCTCCCTGCACCATTGGCTGCCCTTGCCATGTGGGAGAGCATACAACAGAAGATCGTGCGCACTTCCGTCGACAAGATACCTCGTCT
TGAACAAGAGACGTCCAAAATATTTCATGTGATTTTTGAGACCTGTGCATCCAGCTTGGACCCTCTTAAAGAAATTGTAACGAAGGGTACACTTCATCAACAACATTTGC
AAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGA
Protein sequenceShow/hide protein sequence
MMVEFSGDGGAKYFNDFEARVHIHKAKHGNYLEEGIQKLVGSASPLPSKPKLPKKVGNNNGGKRIHLFEPGEFLSKDDDGSQSSSSDHHWKRHKKSNKPSVCEDEFFDGV
PSASQFPELPAPLAALAMWESIQQKIVRTSVDKIPRLEQETSKIFHVIFETCASSLDPLKEIVTKGTLHQQHLQALREEEELEARLEAVKAKR