; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009057 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009057
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome locationscaffold8:17643699..17650408
RNA-Seq ExpressionSpg009057
SyntenySpg009057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5983.01Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++        RVVREGKERRR WAEKKTPR SKKGE VED+AETP HNDQ+SKLGMLPSNLVQLLA+REKQVFSSD GDEKP  K KTKRKK+KSSGI+
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-6083.66Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++        RVVREGKERRR WAEKKTPR SKKGE VED+AETP HNDQ+SKLGMLPSNLVQLLA+REKQVFSSD GDEKP  K KTKRKK+KSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]2.2e-5980.39Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++      + RV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D+ISKLG LPSN+VQLL DREKQVFSSD GDEKP +KPK KRKKTKSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNERTPS CLQNSLEFLKKRKMN++RSS+VL NPNQA RLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

XP_022158697.1 uncharacterized protein LOC111025162 [Momordica charantia]1.7e-5982.89Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E+    +  + RVVREGKERRRLWAEKKTPRPSKKGE VED+AE P+H DQ SKLGMLPSNLVQLLADREKQVFSSD GDEKP  KPKTKRKKTKSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK
        TV+LN+R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LSSSGLLTK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK

XP_022947715.1 uncharacterized protein LOC111451498 [Cucurbita moschata]2.9e-5983.01Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++        RVVREGKERRR WAEKKTPR SKK E VED+AETP HNDQ+SKLGMLPSNLVQLLA+REKQVFSSD GDEKP  K KTKRKK+KSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

TrEMBL top hitse value%identityAlignment
A0A0A0LM07 Uncharacterized protein1.1e-5980.39Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++      + RV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D+ISKLG LPSN+VQLL DREKQVFSSD GDEKP +KPK KRKKTKSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNERTPS CLQNSLEFLKKRKMN++RSS+VL NPNQA RLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A5A7TWK6 Uncharacterized protein1.3e-5778.57Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTK-SSGI
        E++   +  + RV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D++SKLG LPSN+VQLL DREKQVFSSD GDEKP +KPK KRKKTK SSGI
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTK-SSGI

Query:  ETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        ETVLL+ERTPS CLQNSLEFLKKRKMN++RSS+VL+NPNQA RLLSSSGLLTKK
Subjt:  ETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC1110251628.3e-6082.89Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E+    +  + RVVREGKERRRLWAEKKTPRPSKKGE VED+AE P+H DQ SKLGMLPSNLVQLLADREKQVFSSD GDEKP  KPKTKRKKTKSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK
        TV+LN+R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LSSSGLLTK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK

A0A6J1G7P4 uncharacterized protein LOC1114514981.4e-5983.01Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++        RVVREGKERRR WAEKKTPR SKK E VED+AETP HNDQ+SKLGMLPSNLVQLLA+REKQVFSSD GDEKP  K KTKRKK+KSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A6J1KZ49 uncharacterized protein LOC1114995705.4e-5981.7Show/hide
Query:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE
        E++        RVVREGKERRR WAEKKTPRPSKKGE VED+AETP HNDQ+SKLGMLPSNLVQLLA+REKQVFSSD GDEKP  K KT+R+K+KSSGIE
Subjt:  ELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIE

Query:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        TVLLN R PSQC QNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  TVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37090.1 unknown protein3.6e-2344.83Show/hide
Query:  RVVREGKERRRLWAEKKTPRPSKKGEIVEDIA--ETPAHNDQ-ISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERT
        RV RE KERR+L AE+ T R S+K EI+ED+   E P  N + ++  G L  +++  LA+REKQ   SD  +E+ ++    ++KK KSSGIETV+  E  
Subjt:  RVVREGKERRRLWAEKKTPRPSKKGEIVEDIA--ETPAHNDQ-ISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERT

Query:  PSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        P +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  PSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

AT4G37090.2 unknown protein3.6e-2344.83Show/hide
Query:  RVVREGKERRRLWAEKKTPRPSKKGEIVEDIA--ETPAHNDQ-ISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERT
        RV RE KERR+L AE+ T R S+K EI+ED+   E P  N + ++  G L  +++  LA+REKQ   SD  +E+ ++    ++KK KSSGIETV+  E  
Subjt:  RVVREGKERRRLWAEKKTPRPSKKGEIVEDIA--ETPAHNDQ-ISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERT

Query:  PSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        P +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  PSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCCGAGGAGTTCACTGCCGAGCAGGTTCGTTGTTTTCACTTTCTATACTTCTACTTGGCACTTGGCCCTGAACTATT
AGCAACTTATCTGTCGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGAGGAAGAAAAGATGATTTGATCTCTCATCTTGTGTTGT
TGACATCCAAAGATAATAGTCTTGCATCCACCATGGATCACAAACCAGTGGAACAATGTGGCCTTCTTCTGACACCTACGATTCCACGCCAGACATCTGAGGGAAGGTGG
ATAGCAATCTCAATGGAGGAGGAACTCCTCGATCACCCCCTTGTGGTCTCTGAAGCTCCTGACCTGCAACTTGAAGGCCTCGAAGAACAAACTCCGGACAGAACCCACAA
AGTTAACGTGCATGTAGTAGGGTCAGGCGGTTGTCCTGTGAGATTAGTTGAGTTTTATGTTCTATTCTTAGAACTCAAGGACACAGATGATTCTGTTCAAGTAAGGGTTG
TTCGTGAAGGAAAAGAACGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTGTCGAAGATATAGCAGAAACCCCTGCACATAATGAT
CAAATTAGCAAGTTGGGAATGCTTCCCAGTAATCTGGTCCAACTGCTTGCAGATCGTGAGAAACAAGTTTTCTCGTCAGACCATGGAGATGAAAAGCCTGTTGTAAAGCC
AAAAACAAAGAGGAAGAAAACCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAAAGAACACCATCTCAATGCTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGA
AGATGAATATTTCAAGGTCATCATCAGTTCTCGACAATCCTAACCAAGCGTTACGCCTTCTTTCTTCATCTGGCTTATTAACTAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCCGAGGAGTTCACTGCCGAGCAGGTTCGTTGTTTTCACTTTCTATACTTCTACTTGGCACTTGGCCCTGAACTATT
AGCAACTTATCTGTCGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGAGGAAGAAAAGATGATTTGATCTCTCATCTTGTGTTGT
TGACATCCAAAGATAATAGTCTTGCATCCACCATGGATCACAAACCAGTGGAACAATGTGGCCTTCTTCTGACACCTACGATTCCACGCCAGACATCTGAGGGAAGGTGG
ATAGCAATCTCAATGGAGGAGGAACTCCTCGATCACCCCCTTGTGGTCTCTGAAGCTCCTGACCTGCAACTTGAAGGCCTCGAAGAACAAACTCCGGACAGAACCCACAA
AGTTAACGTGCATGTAGTAGGGTCAGGCGGTTGTCCTGTGAGATTAGTTGAGTTTTATGTTCTATTCTTAGAACTCAAGGACACAGATGATTCTGTTCAAGTAAGGGTTG
TTCGTGAAGGAAAAGAACGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTGTCGAAGATATAGCAGAAACCCCTGCACATAATGAT
CAAATTAGCAAGTTGGGAATGCTTCCCAGTAATCTGGTCCAACTGCTTGCAGATCGTGAGAAACAAGTTTTCTCGTCAGACCATGGAGATGAAAAGCCTGTTGTAAAGCC
AAAAACAAAGAGGAAGAAAACCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAAAGAACACCATCTCAATGCTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGA
AGATGAATATTTCAAGGTCATCATCAGTTCTCGACAATCCTAACCAAGCGTTACGCCTTCTTTCTTCATCTGGCTTATTAACTAAGAAATAG
Protein sequenceShow/hide protein sequence
MSDREDTDSDAPEEFTAEQVRCFHFLYFYLALGPELLATYLSQGIQQDQEIRKVQKESKARGRKDDLISHLVLLTSKDNSLASTMDHKPVEQCGLLLTPTIPRQTSEGRW
IAISMEEELLDHPLVVSEAPDLQLEGLEEQTPDRTHKVNVHVVGSGGCPVRLVEFYVLFLELKDTDDSVQVRVVREGKERRRLWAEKKTPRPSKKGEIVEDIAETPAHND
QISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK