; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009060 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009060
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold8:17119423..17121850
RNA-Seq ExpressionSpg009060
SyntenySpg009060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.7e-1638.52Show/hide
Query:  ENQDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--R
        E  D+ ND+   PP ++L+N+ + WRICT   TLS++YLP+R L+P    T+ +  WW+ KHG Y E+    L++ +  PP++P+  K+  +    K  R
Subjt:  ENQDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--R

Query:  VIEESTRSTNNLRDE-----EESHSSNDDRHWKRP
        ++E       NL +E     +ES SS  DRHWKRP
Subjt:  VIEESTRSTNNLRDE-----EESHSSNDDRHWKRP

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]6.0e-1738.46Show/hide
Query:  QDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHK----DLNAKKARKR
        QD+ ND+   PP ++ +N+ H WRICT   TL+++YLP+R L+P    T+ +  WWS +HG Y E+ I  L++ +  PP++PK  K    +L  K+ R  
Subjt:  QDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHK----DLNAKKARKR

Query:  VIEESTRSTNNLRDEEESHSSNDDRHWKRP
            +T        ++E+ SS  DRHWKRP
Subjt:  VIEESTRSTNNLRDEEESHSSNDDRHWKRP

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]5.0e-1637.01Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE
        D+ ND+   PP ++L+N+ + WRIC    TLS++YLP+R L+P    T+ +  WW+ KHG Y E+    L++    PP++P+  K+  +    K  R++E
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE

Query:  ESTRSTNNLRDEEESHSSNDDRHWKRP
            +  +  +E ES S+  DRHWKRP
Subjt:  ESTRSTNNLRDEEESHSSNDDRHWKRP

TYK16513.1 hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]1.7e-1640Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARKRVIEES
        D+ ND+   PP ++L N+ + WRICT   TLSK+YL +R L+P    T+ +  WW+ +HG Y E+    LM+    PP++PK  K+  +    K+ I   
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARKRVIEES

Query:  TRSTNNLRDE-----EESHSSNDDRHWKRP
           T NL +E     +ES SS  DRHWKRP
Subjt:  TRSTNNLRDE-----EESHSSNDDRHWKRP

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]6.6e-1637.01Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE
        D+ ND+   PP ++L+N+ + WRICT   TL ++YLP+R L+P    T+ +  WW+ KHG Y E+    L++ +  PP++P+  K+  +    K  R++E
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE

Query:  ESTRSTNNLRDEEESHSSNDDRHWKRP
            +      E ES SS  D HWKRP
Subjt:  ESTRSTNNLRDEEESHSSNDDRHWKRP

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein8.4e-1738.52Show/hide
Query:  ENQDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--R
        E  D+ ND+   PP ++L+N+ + WRICT   TLS++YLP+R L+P    T+ +  WW+ KHG Y E+    L++ +  PP++P+  K+  +    K  R
Subjt:  ENQDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--R

Query:  VIEESTRSTNNLRDE-----EESHSSNDDRHWKRP
        ++E       NL +E     +ES SS  DRHWKRP
Subjt:  VIEESTRSTNNLRDE-----EESHSSNDDRHWKRP

A0A5A7TFC8 PMD domain-containing protein3.2e-1637.01Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE
        D+ ND+   PP ++L+N+ + WRICT   TL ++YLP+R L+P    T+ +  WW+ KHG Y E+    L++ +  PP++P+  K+  +    K  R++E
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE

Query:  ESTRSTNNLRDEEESHSSNDDRHWKRP
            +      E ES SS  D HWKRP
Subjt:  ESTRSTNNLRDEEESHSSNDDRHWKRP

A0A5A7UVI5 PMD domain-containing protein2.4e-1637.01Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE
        D+ ND+   PP ++L+N+ + WRIC    TLS++YLP+R L+P    T+ +  WW+ KHG Y E+    L++    PP++P+  K+  +    K  R++E
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARK--RVIE

Query:  ESTRSTNNLRDEEESHSSNDDRHWKRP
            +  +  +E ES S+  DRHWKRP
Subjt:  ESTRSTNNLRDEEESHSSNDDRHWKRP

A0A5D3CXA5 Uncharacterized protein8.4e-1740Show/hide
Query:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARKRVIEES
        D+ ND+   PP ++L N+ + WRICT   TLSK+YL +R L+P    T+ +  WW+ +HG Y E+    LM+    PP++PK  K+  +    K+ I   
Subjt:  DVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARKRVIEES

Query:  TRSTNNLRDE-----EESHSSNDDRHWKRP
           T NL +E     +ES SS  DRHWKRP
Subjt:  TRSTNNLRDE-----EESHSSNDDRHWKRP

A0A5D3D2A0 PMD domain-containing protein2.9e-1738.46Show/hide
Query:  QDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHK----DLNAKKARKR
        QD+ ND+   PP ++ +N+ H WRICT   TL+++YLP+R L+P    T+ +  WWS +HG Y E+ I  L++ +  PP++PK  K    +L  K+ R  
Subjt:  QDVSNDLHNDPPPVSLENVFHSWRICTATLTLSKVYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHK----DLNAKKARKR

Query:  VIEESTRSTNNLRDEEESHSSNDDRHWKRP
            +T        ++E+ SS  DRHWKRP
Subjt:  VIEESTRSTNNLRDEEESHSSNDDRHWKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAATTCAGGCTGATCATTCTCTCACTTCTGTTTCCTCGGGCAGTGATCATCCCCTAATTCAGGCGGAATTCAGGCTGATCACTCGCCTTTCACATCTTGCCTCAGGTAG
TGATCAACCCCTGATTCAGGCGGAATTTAGGCTAATCACTCGCCCTTCACATTTTGCCTCATGTAGTGATCAACCCCTGATTCAGGCGGAATTCAGGCTGATCACTCGCC
CTTCACATCCTGCCTCAGGCAGTGGTCAACCCCTGATTCAGGCAGAATTCAGGACCATGGTGCATTTCACAGAGCTTTCAAATAATGGGAAGAAAAGTCTGGTTGTTTTA
CTGAACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCAACTACAGAGTCAAACCTCGAATTGAACAAATCTCATTTTCTTTCGGAATGGTCCGT
AGAAAAGGCTCAAGGTCAACACTCTTCCACTAAGGTTTGGATTCTACGATCTTTTTTACAAGGAAAGAAGCCAAATGTCAATCAAGAATCGATGTTGGGGCATCGCATCA
TTGAAAATCAGGATGTATCGAATGACTTACATAATGATCCTCCCCCTGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATCTGTACTGCAACTTTGACTTTGTCGAAG
GTATACCTCCCATCGCGCCTACTAGATCCTCGTGATCAAAGTACTCGATCTTATGATAAGTGGTGGTCGCAAAAACATGGGCGTTACTTGGAGGAAGGGATACAACTTTT
AATGAATTGTCTTACTATTCCTCCAACTAAGCCTAAACCTCATAAAGATCTGAATGCCAAAAAAGCTCGTAAGAGGGTGATTGAGGAGTCAACTCGTTCGACGAACAACC
TTCGTGATGAAGAAGAAAGTCATAGCAGCAATGATGATCGTCATTGGAAAAGGCCAAAA
mRNA sequenceShow/hide mRNA sequence
AGAATTCAGGCTGATCATTCTCTCACTTCTGTTTCCTCGGGCAGTGATCATCCCCTAATTCAGGCGGAATTCAGGCTGATCACTCGCCTTTCACATCTTGCCTCAGGTAG
TGATCAACCCCTGATTCAGGCGGAATTTAGGCTAATCACTCGCCCTTCACATTTTGCCTCATGTAGTGATCAACCCCTGATTCAGGCGGAATTCAGGCTGATCACTCGCC
CTTCACATCCTGCCTCAGGCAGTGGTCAACCCCTGATTCAGGCAGAATTCAGGACCATGGTGCATTTCACAGAGCTTTCAAATAATGGGAAGAAAAGTCTGGTTGTTTTA
CTGAACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCAACTACAGAGTCAAACCTCGAATTGAACAAATCTCATTTTCTTTCGGAATGGTCCGT
AGAAAAGGCTCAAGGTCAACACTCTTCCACTAAGGTTTGGATTCTACGATCTTTTTTACAAGGAAAGAAGCCAAATGTCAATCAAGAATCGATGTTGGGGCATCGCATCA
TTGAAAATCAGGATGTATCGAATGACTTACATAATGATCCTCCCCCTGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATCTGTACTGCAACTTTGACTTTGTCGAAG
GTATACCTCCCATCGCGCCTACTAGATCCTCGTGATCAAAGTACTCGATCTTATGATAAGTGGTGGTCGCAAAAACATGGGCGTTACTTGGAGGAAGGGATACAACTTTT
AATGAATTGTCTTACTATTCCTCCAACTAAGCCTAAACCTCATAAAGATCTGAATGCCAAAAAAGCTCGTAAGAGGGTGATTGAGGAGTCAACTCGTTCGACGAACAACC
TTCGTGATGAAGAAGAAAGTCATAGCAGCAATGATGATCGTCATTGGAAAAGGCCAAAA
Protein sequenceShow/hide protein sequence
RIQADHSLTSVSSGSDHPLIQAEFRLITRLSHLASGSDQPLIQAEFRLITRPSHFASCSDQPLIQAEFRLITRPSHPASGSGQPLIQAEFRTMVHFTELSNNGKKSLVVL
LNKDQPIKSGTILPIETSTTESNLELNKSHFLSEWSVEKAQGQHSSTKVWILRSFLQGKKPNVNQESMLGHRIIENQDVSNDLHNDPPPVSLENVFHSWRICTATLTLSK
VYLPSRLLDPRDQSTRSYDKWWSQKHGRYLEEGIQLLMNCLTIPPTKPKPHKDLNAKKARKRVIEESTRSTNNLRDEEESHSSNDDRHWKRPK