CuGenDBv2

Gene ID	Spg009277
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Dynein beta chain, ciliary protein
Genome location	scaffold13:271318..274529
RNA-Seq Expression	Spg009277
Synteny	Spg009277
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575057.1 hypothetical protein SDJN03_25696, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-48

88.52

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        DRPMP+LRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]

1.9e-48

88.52

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        DRPMP+LRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]

8.7e-49

88.52

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSGNVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        +RPMPKLRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]

6.7e-49

89.34

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R VEKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        DRPMP+LRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

XP_038875975.1 uncharacterized protein LOC120068322 [Benincasa hispida]

7.9e-50

90.98

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDSTASSLKMESV DRKPP RV EKARESGALD G    SNSGNVLEERD QFDAMLSQMVGRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        DRPMPKLRNTD KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCC5 Uncharacterized protein

5.2e-47

86.99

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Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPP RV EKARESGALDSG    S+SGN+LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPA
        Y RPMPKLR+T++ SSKYEDRPA
Subjt:  YDRPMPKLRNTDVKSSKYEDRPA

A0A1S3C7E9 uncharacterized protein LOC103497865 isoform X2

1.2e-46

86.18

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Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TASSLKMES+VDRKPP RV EKARESG+LDSG    S+SGN LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPA
        Y RPMPKLR+T++KSSKYEDRPA
Subjt:  YDRPMPKLRNTDVKSSKYEDRPA

A0A1S3C957 uncharacterized protein LOC103497865 isoform X1

1.2e-46

86.18

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Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TASSLKMES+VDRKPP RV EKARESG+LDSG    S+SGN LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPA
        Y RPMPKLR+T++KSSKYEDRPA
Subjt:  YDRPMPKLRNTDVKSSKYEDRPA

A0A6J1H4J6 uncharacterized protein LOC111459975

9.4e-49

88.52

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        DRPMP+LRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

A0A6J1L288 uncharacterized protein LOC111499180

4.2e-49

88.52

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSGNVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPA
        +RPMPKLRNTD+KSSKYEDRPA
Subjt:  DRPMPKLRNTDVKSSKYEDRPA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G21400.1 unknown protein

3.0e-23

48.41

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Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSG------NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVE
        MGQ  RRA G+IK       +  S+   S+   +  L  V+ +  + A+D  S+ G      NVLEERD ++D ML+QMVGRIK+KPGGK EMGEASVVE
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSG------NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVE

Query:  RYDRPMPKLRNTDVKSSKYEDRPAHQ
           RP+PKLRNT  +S++YE+ P  Q
Subjt:  RYDRPMPKLRNTDVKSSKYEDRPAHQ

Sequences

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CDS sequence

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ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCGAGCATCGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCT
GCGTGTGGTCGAGAAGGCTCGGGAGAGCGGCGCTCTTGATTCTGGAAGTAATTCGGGAAATGTGCTTGAAGAACGAGATACGCAGTTCGATGCCATGCTTAGCCAAATGG
TGGGTCGAATTAAATCAAAGCCAGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGTATGACAGACCAATGCCAAAGCTACGAAATACAGATGTAAAATCC
AGTAAATACGAGGATCGGCCAGCTCACCAGGCACTTTAA

mRNA sequence

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Protein sequence

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MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKS
SKYEDRPAHQAL

Spg009277 (gene) of Sponge gourd (cylindrica) v1 genome