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Spg009289 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009289
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Genome locationscaffold32:62908..64239
RNA-Seq ExpressionSpg009289
SyntenySpg009289
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7015540.1 unnamed protein product, partial [Microthlaspi erraticum]1.2e-5680Show/hide
Query:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL
        L  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYF IGHPGVFSLARWSLLIHTGFHVPHATR                         MFQFARL
Subjt:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL

Query:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
        SLACPWIQQQF+RLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
Subjt:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR

KAF1888201.1 hypothetical protein Lal_00030082, partial [Lupinus albus]1.6e-5863.23Show/hide
Query:  MSSQQQRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS
        MS+Q   LNAFRGEP S+  EWHFT NHNSSADSSTSV SDLHL   +            GLLPLLGSL+FHVLFHSPMGVLFTLPS YYFTIGH GVFS
Subjt:  MSSQQQRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS

Query:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS
        LARWS          LL+   H G ++      A R+ +          LLPF SPLLRESL + FP ATKM     LSLACPWIQ+ FE+LTYSGISGS
Subjt:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS

Query:  TLIFNSPKHFVAYYALPRLWVPR
        TLIFNS KHF AYYALPRLWVPR
Subjt:  TLIFNSPKHFVAYYALPRLWVPR

KAF3449759.1 hypothetical protein FNV43_RR05837 [Rhamnella rubrinervis]2.4e-7397.24Show/hide
Query:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL
        L  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHV HATRVRALLPFRSPLL ESLLLSFPLATKMFQFARL
Subjt:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL

Query:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
        SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
Subjt:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR

KAG4154841.1 hypothetical protein ERO13_D03G074976v2 [Gossypium hirsutum]1.2e-6164.38Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSP GVLFTLPS               RWSLLIHTGFHVPHATRVRALLP
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP

Query:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRA------------------
        FRSPLLRESLLLSFP ATKMFQFARLSL CPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVP  ++ + + R A                  
Subjt:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRA------------------

Query:  ----FPFSARLFGLKNAGF
                 RLFGLKNAGF
Subjt:  ----FPFSARLFGLKNAGF

KAG4211951.1 hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum]4.2e-7078.57Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSP GVLFTLPSRYYF IGHPGVFSLAR SLLIHTGFHVPHATRVRALLP
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP

Query:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRA
        F SPLLRESLLLSFP ATKMFQFARLSL CPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVP  ++ + + R A
Subjt:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRA

TrEMBL top hitse value%identityAlignment
A0A2N9HF66 Uncharacterized protein4.8e-7276.35Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQER+A P SARLFGLKN
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN

Query:  AGF
        AGF
Subjt:  AGF

A0A2N9HSC7 Uncharacterized protein9.7e-7384.75Show/hide
Query:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKM
        L  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R R LLPFRSPLLRESLLLSFPLATKM
Subjt:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKM

Query:  FQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKNAGF
        FQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQER+A P SARLFGLKNAGF
Subjt:  FQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKNAGF

A0A2N9I3M4 Uncharacterized protein1.6e-7285.63Show/hide
Query:  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQF
        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R R LLPFRSPLLRESLLLSFPLATKMFQF
Subjt:  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQF

Query:  ARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKNAGF
        ARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQER+A P SARLFGLKNAGF
Subjt:  ARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKNAGF

A0A2N9I5R1 Uncharacterized protein4.8e-7276.35Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQER+A P SARLFGLKN
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN

Query:  AGF
        AGF
Subjt:  AGF

A0A2N9I7K2 Uncharacterized protein4.8e-7276.35Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQER+A P SARLFGLKN
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKN

Query:  AGF
        AGF
Subjt:  AGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGTCAACAGCAGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTC
AGAGCGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATG
GATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTGATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGG
TGCCTAGGATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGTCAACAGCAGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTC
AGAGCGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATG
GATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTGATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGG
TGCCTAGGATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGA
Protein sequenceShow/hide protein sequence
MSSQQQRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRV
RALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRIQLQENQERRAFPFSARLFGLKNAGFKNE