; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009328 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009328
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncyclin-T1-4
Genome locationscaffold5:37204010..37205870
RNA-Seq ExpressionSpg009328
SyntenySpg009328
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0032786 - positive regulation of DNA-templated transcription, elongation (biological process)
GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0008024 - cyclin/CDK positive transcription elongation factor complex (cellular component)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR036915 - Cyclin-like superfamily
IPR043198 - Cyclin/Cyclin-like subunit Ssn8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022994766.1 cyclin-T1-3-like isoform X1 [Cucurbita maxima]6.0e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

XP_022994767.1 cyclin-T1-5-like isoform X2 [Cucurbita maxima]6.0e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

XP_022994768.1 cyclin-T1-4-like isoform X3 [Cucurbita maxima]6.0e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

XP_023541054.1 cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo]6.0e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

XP_023541055.1 cyclin-T1-5-like isoform X2 [Cucurbita pepo subsp. pepo]6.0e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

TrEMBL top hitse value%identityAlignment
A0A6J1GS49 cyclin-T1-3-like isoform X18.5e-3396.05Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQ+KQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

A0A6J1GSE5 cyclin-T1-5-like isoform X28.5e-3396.05Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQ+KQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

A0A6J1JWT1 cyclin-T1-5-like isoform X22.9e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

A0A6J1K036 cyclin-T1-3-like isoform X12.9e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

A0A6J1K620 cyclin-T1-4-like isoform X32.9e-3397.37Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAG WY+SRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

SwissProt top hitse value%identityAlignment
Q2QQS5 Cyclin-T1-42.7e-2065.79Show/hide
Query:  LPFDSTHHRTSDGGSSKSSQDKQDEAGR----WYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        +P DS+HH   +    +++Q + +E G     WY SRKEIEENSPSRRDGIDLKKE+YLRKSYCTFLQDLGMRLKV
Subjt:  LPFDSTHHRTSDGGSSKSSQDKQDEAGR----WYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

Q2RAC5 Cyclin-T1-31.9e-1862.5Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGR----WYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M G    DS+HH   +    ++  D+  E G+    WY SRKEIEENS SRRDGIDLKKE+YLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGR----WYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

Q56YF8 Cyclin-T1-27.9e-1267.24Show/hide
Query:  SSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        SS +S    DE   W+ SR+EIE NSPSRRDGIDLK ET LR SYCTFL+ LG RLKV
Subjt:  SSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

Q8GYM6 Cyclin-T1-42.7e-2067.11Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M+G L  D +   +     S++S +KQDE  RWY  RKEIEENSPSR D IDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

Q9FKE6 Cyclin-T1-51.2e-2065.79Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M+G L  + ++  +     S++S +KQ+E  RWY  RKEIEENSPSR DGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

Arabidopsis top hitse value%identityAlignment
AT1G27630.1 cyclin T 1;31.6e-1252.94Show/hide
Query:  STHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        S  H  ++  +    +  Q E  +WY SR+EIE  SPSR+DGIDL KE++LR SYCTFLQ LGM+L V
Subjt:  STHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

AT4G19560.1 Cyclin family protein5.6e-1367.24Show/hide
Query:  SSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        SS +S    DE   W+ SR+EIE NSPSRRDGIDLK ET LR SYCTFL+ LG RLKV
Subjt:  SSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

AT4G19600.1 Cyclin family protein1.9e-2167.11Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M+G L  D +   +     S++S +KQDE  RWY  RKEIEENSPSR D IDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

AT5G45190.1 Cyclin family protein8.7e-2265.79Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M+G L  + ++  +     S++S +KQ+E  RWY  RKEIEENSPSR DGIDLKKETYLRKSYCTFLQDLGMRLKV
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV

AT5G45190.2 Cyclin family protein1.9e-2164.47Show/hide
Query:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV
        M+G L  + ++  +     S++S +KQ+E  RWY  RKEIEENSPSR DGIDLKKETYLRKSYCTFLQDLGMRLK+
Subjt:  MSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCTTCCGTCGAACCCTCTAGGGCACACCACAGAAGAACTCTGCACCATCTCCATCCCCAAATTCATGCTTCTCGCCAATCTTCCTCTGCTCTCGATTCGAGCTC
TCCCTTAGCACCTACTCCCTCTCTCGCGGGCTTTCACACTCACGGTTTTGTATGTGTAAGTATTTCCAATCCCTTGGTTGTCTTTGAACTTCTCGTCACCCTCTCATGTC
GTTTTTGGGGTTCCAATCTCTTTCCCTCGATCTCGCTCCTCCGTCTCGCTCATGGCATCGTTCTACTATTCGCCAGGGAGGGAAGCTCTTGGATTTCGCGAATTCTGAGA
GCTTATTTTGGGATAAGGAAAATCGGGGTGTCATTGAGCTTCGTGGCAAGAGTGGATAATGCAAAGAGTTGGTTGTTTTGCTTAATTGTTAAGGAATTGTTGGAAGTAGA
CGAAAAGGGGATTAGAGAGTTGGAAGGGCTTATGACCGGAGAGGACTATTGCAAGATACACATGTCTGGATTTCTACCATTTGATTCAACACATCATAGAACATCTGATG
GTGGGTCCTCAAAGAGTTCTCAAGACAAACAAGATGAAGCAGGTCGTTGGTATATGTCTAGAAAGGAAATTGAAGAAAATTCCCCATCAAGAAGAGATGGTATTGACTTG
AAGAAGGAGACTTATTTACGGAAGTCATACTGTACATTTTTGCAAGATCTGGGCATGAGGCTTAAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCTTCCGTCGAACCCTCTAGGGCACACCACAGAAGAACTCTGCACCATCTCCATCCCCAAATTCATGCTTCTCGCCAATCTTCCTCTGCTCTCGATTCGAGCTC
TCCCTTAGCACCTACTCCCTCTCTCGCGGGCTTTCACACTCACGGTTTTGTATGTGTAAGTATTTCCAATCCCTTGGTTGTCTTTGAACTTCTCGTCACCCTCTCATGTC
GTTTTTGGGGTTCCAATCTCTTTCCCTCGATCTCGCTCCTCCGTCTCGCTCATGGCATCGTTCTACTATTCGCCAGGGAGGGAAGCTCTTGGATTTCGCGAATTCTGAGA
GCTTATTTTGGGATAAGGAAAATCGGGGTGTCATTGAGCTTCGTGGCAAGAGTGGATAATGCAAAGAGTTGGTTGTTTTGCTTAATTGTTAAGGAATTGTTGGAAGTAGA
CGAAAAGGGGATTAGAGAGTTGGAAGGGCTTATGACCGGAGAGGACTATTGCAAGATACACATGTCTGGATTTCTACCATTTGATTCAACACATCATAGAACATCTGATG
GTGGGTCCTCAAAGAGTTCTCAAGACAAACAAGATGAAGCAGGTCGTTGGTATATGTCTAGAAAGGAAATTGAAGAAAATTCCCCATCAAGAAGAGATGGTATTGACTTG
AAGAAGGAGACTTATTTACGGAAGTCATACTGTACATTTTTGCAAGATCTGGGCATGAGGCTTAAAGTGTAA
Protein sequenceShow/hide protein sequence
MPASVEPSRAHHRRTLHHLHPQIHASRQSSSALDSSSPLAPTPSLAGFHTHGFVCVSISNPLVVFELLVTLSCRFWGSNLFPSISLLRLAHGIVLLFAREGSSWISRILR
AYFGIRKIGVSLSFVARVDNAKSWLFCLIVKELLEVDEKGIRELEGLMTGEDYCKIHMSGFLPFDSTHHRTSDGGSSKSSQDKQDEAGRWYMSRKEIEENSPSRRDGIDL
KKETYLRKSYCTFLQDLGMRLKV