; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009335 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009335
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontransforming growth factor-beta receptor-associated protein 1
Genome locationscaffold5:37237025..37242592
RNA-Seq ExpressionSpg009335
SyntenySpg009335
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
InterPro domainsIPR032914 - Vam6/VPS39/TRAP1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583814.1 Vacuolar sorting protein 3, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5893.33Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSR LKDSSMDEG LD NVVDI GKETAAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
XP_022142461.1 transforming growth factor-beta receptor-associated protein 1 [Momordica charantia]1.8e-5791.85Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELETLL+DSGHLRTLAFLYASKGMSSKALAIWRILGRNY S LLKDSSMDEGALD NVVDI GKE AAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFAIQILTSEKRSSQLSPDDI++AIDP+KVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
XP_022927318.1 transforming growth factor-beta receptor-associated protein 1 [Cucurbita moschata]5.6e-5994.07Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEG LD NVVDI GKETAAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
XP_023000918.1 transforming growth factor-beta receptor-associated protein 1 [Cucurbita maxima]1.4e-5792.59Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEG LD NVVDI GKETAAAEASKILEESSDQ LVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKV ILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
XP_023519503.1 transforming growth factor-beta receptor-associated protein 1 [Cucurbita pepo subsp. pepo]2.8e-5893.33Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEG LD NVVDI GKE AAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
TrEMBL top hitse value%identityAlignment
A0A1S3C9W8 transforming growth factor-beta receptor-associated protein 1 isoform X31.6e-5683.12Show/hide
Query:  LRRSIFAVIEDRKLQSA----VQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILE
        L R++ +V +  KL S+    V EELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDE  +D NV DI GKETAAAEASKILE
Subjt:  LRRSIFAVIEDRKLQSA----VQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILE

Query:  ESSDQALVLQHLGWIADINQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        ESSDQALVLQHLGWIADINQHFAIQILTSEKR SQLSPDDII AID KKVE+LQ
Subjt:  ESSDQALVLQHLGWIADINQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
A0A5A7TKD4 Transforming growth factor-beta receptor-associated protein 1 isoform X11.6e-5683.12Show/hide
Query:  LRRSIFAVIEDRKLQSA----VQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILE
        L R++ +V +  KL S+    V EELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDE  +D NV DI GKETAAAEASKILE
Subjt:  LRRSIFAVIEDRKLQSA----VQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILE

Query:  ESSDQALVLQHLGWIADINQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        ESSDQALVLQHLGWIADINQHFAIQILTSEKR SQLSPDDII AID KKVE+LQ
Subjt:  ESSDQALVLQHLGWIADINQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
A0A6J1CM87 transforming growth factor-beta receptor-associated protein 18.7e-5891.85Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELETLL+DSGHLRTLAFLYASKGMSSKALAIWRILGRNY S LLKDSSMDEGALD NVVDI GKE AAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFAIQILTSEKRSSQLSPDDI++AIDP+KVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
A0A6J1EKN6 transforming growth factor-beta receptor-associated protein 12.7e-5994.07Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEG LD NVVDI GKETAAAEASKILEESSDQALVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKVEILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
A0A6J1KP09 transforming growth factor-beta receptor-associated protein 16.7e-5892.59Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN
        S V EELE+LLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEG LD NVVDI GKETAAAEASKILEESSDQ LVLQHLGWIADIN
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALD-NVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADIN

Query:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        QHFA QILTSEKRSSQLSPDDII+AIDPKKV ILQ
Subjt:  QHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
SwissProt top hitse value%identityAlignment
F4I312 Vacuolar sorting protein 31.3e-3761.03Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGAL--DNVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADI
        + V EELETLL +SGHLRTLAFLYA+KGM +KALAIWR+  +NY S L +DS      L  + ++ + GKE AAAEA++ILEE  D  L LQHL WIAD+
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGAL--DNVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADI

Query:  NQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        N  FAIQ+LTS+KR+ +LSP+ +I+AIDPKKVEI+Q
Subjt:  NQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
Arabidopsis top hitse value%identityAlignment
AT1G22860.1 Vacuolar sorting protein 398.9e-3961.03Show/hide
Query:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGAL--DNVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADI
        + V EELETLL +SGHLRTLAFLYA+KGM +KALAIWR+  +NY S L +DS      L  + ++ + GKE AAAEA++ILEE  D  L LQHL WIAD+
Subjt:  SAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGAL--DNVVDIYGKETAAAEASKILEESSDQALVLQHLGWIADI

Query:  NQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ
        N  FAIQ+LTS+KR+ +LSP+ +I+AIDPKKVEI+Q
Subjt:  NQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACAATACAAATATAAAAGAAACTGGTATATTGAGACGCAGCATTTTTGCTGTCATAGAAGATAGAAAACTTCAATCGGCGGTGCAGGAGGAGTTGGAAACTTT
ATTAGAGGACTCTGGACATTTGCGTACGCTTGCTTTCCTTTATGCAAGTAAAGGGATGAGCTCAAAAGCTCTTGCTATTTGGCGTATCTTGGGAAGAAATTATCCATCTC
GACTTTTGAAGGACTCCTCTATGGATGAGGGTGCTCTGGATAATGTTGTGGATATATATGGTAAGGAAACGGCTGCAGCAGAGGCATCAAAGATTCTTGAGGAGTCATCT
GATCAAGCATTGGTTCTTCAGCATCTCGGATGGATTGCAGACATCAACCAGCATTTTGCCATTCAGATTTTGACATCAGAAAAAAGATCATCTCAGTTATCACCAGATGA
TATAATAAAGGCTATTGATCCCAAGAAGGTAGAAATTCTTCAAAGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCACAATACAAATATAAAAGAAACTGGTATATTGAGACGCAGCATTTTTGCTGTCATAGAAGATAGAAAACTTCAATCGGCGGTGCAGGAGGAGTTGGAAACTTT
ATTAGAGGACTCTGGACATTTGCGTACGCTTGCTTTCCTTTATGCAAGTAAAGGGATGAGCTCAAAAGCTCTTGCTATTTGGCGTATCTTGGGAAGAAATTATCCATCTC
GACTTTTGAAGGACTCCTCTATGGATGAGGGTGCTCTGGATAATGTTGTGGATATATATGGTAAGGAAACGGCTGCAGCAGAGGCATCAAAGATTCTTGAGGAGTCATCT
GATCAAGCATTGGTTCTTCAGCATCTCGGATGGATTGCAGACATCAACCAGCATTTTGCCATTCAGATTTTGACATCAGAAAAAAGATCATCTCAGTTATCACCAGATGA
TATAATAAAGGCTATTGATCCCAAGAAGGTAGAAATTCTTCAAAGTGATTGA
Protein sequenceShow/hide protein sequence
MMHNTNIKETGILRRSIFAVIEDRKLQSAVQEELETLLEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGALDNVVDIYGKETAAAEASKILEESS
DQALVLQHLGWIADINQHFAIQILTSEKRSSQLSPDDIIKAIDPKKVEILQSD