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Spg009349 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009349
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:37429839..37430345
RNA-Seq ExpressionSpg009349
SyntenySpg009349
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]5.6e-6275.15Show/hide
Query:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK
        MIP+MQKV SFT+ LTSDPSPFPSLLL+LLIFTFH+P CRFFSY  F    L YYNC G++K+LCN I  S P+RL  GGWALRAAPIALLVVVSWL++K
Subjt:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK

Query:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA KWGSQGC V TIS     EHKAE  EI GCTPWVLVG+I+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]1.1e-6277.51Show/hide
Query:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK
        MIPIMQKVSSFTH LTSDPSPFPSLLLLLLIFTFH+  CRFFSY  F    L YYNC G++K+LCN I IS P+RL  GGWALRAAPIALLVVVSWL++K
Subjt:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK

Query:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA KW SQG RV TIS     EHKAE  EI GCTPWVLVGMI+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]8.6e-6375.76Show/hide
Query:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRKD
        MIPIM K+SS TH LTSDPSPFPSLLLLLLIFT H+PTCRFFSYFL    SLYY+CAG +  LCN +A+S PKRL CGGW+LR APIALLVVVSWLT KD
Subjt:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRKD

Query:  SAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFV
        + GVAA  WGS+ C VPTI +  MR+H+ EA  I GCTPWVLVGMILLLFNMAQRQALIRHCLFV
Subjt:  SAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein6.6e-6176.97Show/hide
Query:  MQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRKDSAG
        MQKVSSFTH LTSDPSPFPSLLLLLLIFTFH+  CRFFSY  F    L YYNC G++K+LCN I IS P+RL  GGWALRAAPIALLVVVSWL++K+SAG
Subjt:  MQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRKDSAG

Query:  VAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        VAA KW SQG RV TIS     EHKAE  EI GCTPWVLVGMI+LLFNMAQRQALIRHCLFVRS+
Subjt:  VAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
A0A5A7TJ52 Uncharacterized protein2.7e-6275.15Show/hide
Query:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK
        MIP+MQKV SFT+ LTSDPSPFPSLLL+LLIFTFH+P CRFFSY  F    L YYNC G++K+LCN I  S P+RL  GGWALRAAPIALLVVVSWL++K
Subjt:  MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSL-YYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRK

Query:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
        +SAGVAA KWGSQGC V TIS     EHKAE  EI GCTPWVLVG+I+LLFNMAQRQALIRHCLFVRS+
Subjt:  DSAGVAAGKWGSQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCATAATGCAAAAAGTCTCCTCTTTTACACATTTGCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTCCTGCTTCTTCTCATCTTCACCTTCCATGTCCC
AACATGTCGTTTCTTCTCTTACTTCCTTTTCACAAGGTCTTCTCTGTACTACAATTGTGCTGGCCATAATAAGGTACTCTGCAATTCCATTGCAATATCCAGACCCAAAA
GGTTGGCTTGTGGGGGTTGGGCTTTACGAGCGGCACCAATTGCCTTACTCGTGGTGGTGAGTTGGTTGACTCGGAAGGACTCGGCAGGAGTCGCTGCTGGGAAGTGGGGG
TCTCAGGGCTGCCGTGTTCCGACCATTTCGGAGCACTGCATGAGGGAGCACAAGGCAGAGGCTGGAGAAATTAGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATATT
GCTGCTATTCAACATGGCTCAACGGCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCATAATGCAAAAAGTCTCCTCTTTTACACATTTGCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTCCTGCTTCTTCTCATCTTCACCTTCCATGTCCC
AACATGTCGTTTCTTCTCTTACTTCCTTTTCACAAGGTCTTCTCTGTACTACAATTGTGCTGGCCATAATAAGGTACTCTGCAATTCCATTGCAATATCCAGACCCAAAA
GGTTGGCTTGTGGGGGTTGGGCTTTACGAGCGGCACCAATTGCCTTACTCGTGGTGGTGAGTTGGTTGACTCGGAAGGACTCGGCAGGAGTCGCTGCTGGGAAGTGGGGG
TCTCAGGGCTGCCGTGTTCCGACCATTTCGGAGCACTGCATGAGGGAGCACAAGGCAGAGGCTGGAGAAATTAGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATATT
GCTGCTATTCAACATGGCTCAACGGCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTGTGTGA
Protein sequenceShow/hide protein sequence
MIPIMQKVSSFTHLLTSDPSPFPSLLLLLLIFTFHVPTCRFFSYFLFTRSSLYYNCAGHNKVLCNSIAISRPKRLACGGWALRAAPIALLVVVSWLTRKDSAGVAAGKWG
SQGCRVPTISEHCMREHKAEAGEISGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSV