CuGenDBv2

Gene ID	Spg009355
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transforming growth factor-beta receptor-associated protein 1
Genome location	scaffold5:37250027..37256842
RNA-Seq Expression	Spg009355
Synteny	Spg009355
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR032914 - Vam6/VPS39/TRAP1 family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008459074.1 PREDICTED: transforming growth factor-beta receptor-associated protein 1 isoform X3 [Cucumis melo]

7.9e-76

65.57

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Query:  LSTPRIIPIGWNLAPDLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ
        L TPRI      L+      L+    VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ
Subjt:  LSTPRIIPIGWNLAPDLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ

Query:  PSEIFPFVLKDPNRWSLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDG
        PSEIFPFV+KDPNRWSLL                                                           IPRNRYWAMHPPPAPFEDVIDDG
Subjt:  PSEIFPFVLKDPNRWSLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDG

Query:  LLAIQRATFLKKVGVETAVNDDFLMNPPSRSDLLESAVKHIIRF
        LLAIQRA FLKKVGVETAVNDDFL+NPP+RSDLLESAVKHIIR+
Subjt:  LLAIQRATFLKKVGVETAVNDDFLMNPPSRSDLLESAVKHIIRF

XP_011660326.1 vacuolar sorting protein 3 [Cucumis sativus]

7.9e-76

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Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        ++VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSK+MLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPPSRSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

XP_022142461.1 transforming growth factor-beta receptor-associated protein 1 [Momordica charantia]

2.7e-76

70.45

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Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        ++VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPPSRSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

XP_038894017.1 vacuolar sorting protein 3 isoform X1 [Benincasa hispida]

9.3e-77

70.45

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Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        ++VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDL+FEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPPSRSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

XP_038894018.1 vacuolar sorting protein 3 isoform X2 [Benincasa hispida]

9.3e-77

70.45

Show/hide

Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        ++VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDL+FEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPPSRSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M3X8 Uncharacterized protein

2.9e-76

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Query:  DLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRW
        DLS +L     VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSK+MLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRW
Subjt:  DLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRW

Query:  SLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGV
        SLL                                                           IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGV
Subjt:  SLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGV

Query:  ETAVNDDFLMNPPSRSDLLESAVKHIIRF
        ETAVNDDFL+NPPSRSDLLESAVKHIIR+
Subjt:  ETAVNDDFLMNPPSRSDLLESAVKHIIRF

A0A1S3C9C4 transforming growth factor-beta receptor-associated protein 1 isoform X1

5.0e-76

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Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        S+VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRA FLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPP+RSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

A0A1S3C9W8 transforming growth factor-beta receptor-associated protein 1 isoform X3

3.8e-76

65.57

Show/hide

Query:  LSTPRIIPIGWNLAPDLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ
        L TPRI      L+      L+    VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ
Subjt:  LSTPRIIPIGWNLAPDLSAQLMSFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQ

Query:  PSEIFPFVLKDPNRWSLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDG
        PSEIFPFV+KDPNRWSLL                                                           IPRNRYWAMHPPPAPFEDVIDDG
Subjt:  PSEIFPFVLKDPNRWSLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDG

Query:  LLAIQRATFLKKVGVETAVNDDFLMNPPSRSDLLESAVKHIIRF
        LLAIQRA FLKKVGVETAVNDDFL+NPP+RSDLLESAVKHIIR+
Subjt:  LLAIQRATFLKKVGVETAVNDDFLMNPPSRSDLLESAVKHIIRF

A0A1S4E2A7 uncharacterized protein LOC103498291 isoform X2

5.0e-76

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Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        S+VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRA FLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPP+RSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

A0A6J1CM87 transforming growth factor-beta receptor-associated protein 1

1.3e-76

70.45

Show/hide

Query:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR
        ++VMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLE AGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFV+KDPNRWSLL      
Subjt:  SRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRR

Query:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
                                                             IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL
Subjt:  GRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFL

Query:  MNPPSRSDLLESAVKHIIRF
        +NPPSRSDLLESAVKHIIR+
Subjt:  MNPPSRSDLLESAVKHIIRF

SwissProt top hits

e value

%identity

Alignment

F4I312 Vacuolar sorting protein 3

2.7e-55

46.85

Show/hide

Query:  SFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEK
        + S+++ Y+++P +EQIKDLLR+K ++E ISL E+L+  GE+SKDML F+HAQIG+LLLFDL+FEEAVN FL+SE M+PSE+FPF+++DPNRWSL+    
Subjt:  SFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEK

Query:  RRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDD
                                                               +PRNRYW +HPPPAPFEDV+D+GL+AIQRA FL+K G++T V+++
Subjt:  RRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDD

Query:  FLMNPPSRSDLLESAVKHIIRF
        F  +PPSR+DLL+SA+K+I R+
Subjt:  FLMNPPSRSDLLESAVKHIIRF

Arabidopsis top hits

e value

%identity

Alignment

AT1G22860.1 Vacuolar sorting protein 39

2.0e-56

46.85

Show/hide

Query:  SFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEK
        + S+++ Y+++P +EQIKDLLR+K ++E ISL E+L+  GE+SKDML F+HAQIG+LLLFDL+FEEAVN FL+SE M+PSE+FPF+++DPNRWSL+    
Subjt:  SFSRVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEK

Query:  RRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDD
                                                               +PRNRYW +HPPPAPFEDV+D+GL+AIQRA FL+K G++T V+++
Subjt:  RRGRGGGRAHLVKWDKVIVNKYGQFLFEWASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDD

Query:  FLMNPPSRSDLLESAVKHIIRF
        F  +PPSR+DLL+SA+K+I R+
Subjt:  FLMNPPSRSDLLESAVKHIIRF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATGAAGTCCACACGAGCGAAGAGGATGAAGAGGAATCATGGAACCCACATGAAGATGAAGACCAGTTGTGCGAAGACGAGTTTTGTCCTTTGTGTCTCAAGACTTGC
GAATCTTGACTCAAAATCATACCCATCCTTCTTTAAGCAGTTTGACCCACGAGTTGTGTCTTCTACTCAAGAACGTGCACCACCTAGGTTGATTGGACAGTTGAGTACAC
CAAGGATCATTCCCATTGGCTGGAATCTTGCCCCAGATTTGTCAGCTCAATTAATGAGCTTCTCACGTGTTATGTGCTATCAAAAATTGCCTTGTGATGAACAAATTAAA
GATTTGCTGAGAAGGAAGAATTTTAAGGAAGCAATCTCTTTGGCGGAGGACCTAGAGCGTGCAGGTGAAATGTCCAAGGATATGCTATACTTTGTTCATGCTCAGATTGG
ATTTCTCTTGCTTTTTGACTTGCAATTTGAGGAAGCAGTAAATCACTTTTTGCAATCTGAGACAATGCAGCCTTCTGAAATATTTCCATTTGTATTGAAAGACCCTAATC
GTTGGTCCCTGCTGTGTTGGGAGAAGAGGAGGGGTCGAGGAGGGGGTAGGGCTCATCTTGTGAAGTGGGACAAGGTCATTGTGAACAAGTATGGCCAGTTTCTTTTTGAG
TGGGCCTCGTGTGGAGGTCTAGGCACTTTCAGAACCTCTTGGAAAGGCATCGCTACGGAGTACCCTTACTTTTCTTGCTTTATTCCCAGAAATCGGTATTGGGCAATGCA
TCCTCCCCCTGCTCCTTTTGAAGATGTTATAGACGATGGCTTGCTTGCCATCCAAAGAGCCACATTTCTTAAAAAAGTAGGAGTCGAAACTGCCGTAAATGATGATTTTC
TCATGAATCCACCAAGTAGATCAGATTTATTGGAGTCAGCGGTAAAACATATTATCAGGTTCGGCGGCCATGATCAGAAGGGCAGTGGAAGTACAGTTATCAGAATGCTA
ATATTGTCTCTATCTTGA

mRNA sequence

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Protein sequence

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MMKSTRAKRMKRNHGTHMKMKTSCAKTSFVLCVSRLANLDSKSYPSFFKQFDPRVVSSTQERAPPRLIGQLSTPRIIPIGWNLAPDLSAQLMSFSRVMCYQKLPCDEQIK
DLLRRKNFKEAISLAEDLERAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVLKDPNRWSLLCWEKRRGRGGGRAHLVKWDKVIVNKYGQFLFE
WASCGGLGTFRTSWKGIATEYPYFSCFIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFLMNPPSRSDLLESAVKHIIRFGGHDQKGSGSTVIRML
ILSLS

Spg009355 (gene) of Sponge gourd (cylindrica) v1 genome