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Spg009359 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009359
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontransforming growth factor-beta receptor-associated protein 1
Genome locationscaffold5:37244680..37248558
RNA-Seq ExpressionSpg009359
SyntenySpg009359
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0034058 - endosomal vesicle fusion (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583814.1 Vacuolar sorting protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1458.54Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
        GV+T+++ +F           E +++  V+Y EASRQK+L +AVREGVDTLLMCLYRTLNSID+ME+LASSANSCVV +  S
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
XP_022142461.1 transforming growth factor-beta receptor-associated protein 1 [Momordica charantia]1.8e-1562.03Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASR KDLM+AVREGVDTLLMCLYRTLNSID+MEKLASSANSCVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
XP_022927318.1 transforming growth factor-beta receptor-associated protein 1 [Cucurbita moschata]1.5e-1458.54Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
        GV+T+++ +F           E +++  V+Y EASRQK+L +AVREGVDTLLMCLYRTLNSID+ME+LASSANSCVV +  S
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
XP_038894017.1 vacuolar sorting protein 3 isoform X1 [Benincasa hispida]6.9e-1560.76Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASRQK+L +AVREGVDTLLMCLYRTLNSID+MEKLASSANSCVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
XP_038894018.1 vacuolar sorting protein 3 isoform X2 [Benincasa hispida]6.9e-1560.76Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASRQK+L +AVREGVDTLLMCLYRTLNSID+MEKLASSANSCVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
TrEMBL top hitse value%identityAlignment
A0A1S3C9W8 transforming growth factor-beta receptor-associated protein 1 isoform X32.2e-1456.96Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASRQK+L++AVREGVDTLLMCLYRTLNS+D+MEKLASS N+CVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
A0A5A7TKD4 Transforming growth factor-beta receptor-associated protein 1 isoform X12.2e-1456.96Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASRQK+L++AVREGVDTLLMCLYRTLNS+D+MEKLASS N+CVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
A0A6J1CM87 transforming growth factor-beta receptor-associated protein 18.8e-1662.03Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        GV+T+++ +F           E +++  ++YLEASR KDLM+AVREGVDTLLMCLYRTLNSID+MEKLASSANSCVV +
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
A0A6J1EKN6 transforming growth factor-beta receptor-associated protein 17.5e-1558.54Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
        GV+T+++ +F           E +++  V+Y EASRQK+L +AVREGVDTLLMCLYRTLNSID+ME+LASSANSCVV +  S
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
A0A6J1KP09 transforming growth factor-beta receptor-associated protein 12.2e-1457.32Show/hide
Query:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
        GV+T+++ +F           E +++  V+Y EASRQK+L +AVREGVDTLLMCLYRTLNSID+ME+L SSANSCVV +  S
Subjt:  GVQTSIDVNF----------WERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPS
SwissProt top hitse value%identityAlignment
F4I312 Vacuolar sorting protein 33.7e-1144.3Show/hide
Query:  GVQTSIDVNFW----------ERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        G+ T +D  F+          + +++   +YLE SR+K L   VREG+DTLLM LYR LN +++ME LASS N+CVV +
Subjt:  GVQTSIDVNFW----------ERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
Arabidopsis top hitse value%identityAlignment
AT1G22860.1 Vacuolar sorting protein 392.6e-1244.3Show/hide
Query:  GVQTSIDVNFW----------ERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD
        G+ T +D  F+          + +++   +YLE SR+K L   VREG+DTLLM LYR LN +++ME LASS N+CVV +
Subjt:  GVQTSIDVNFW----------ERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCGAGCTCCGGCGAAGCATGGCTGCGGAGTCTGTCCGACGGCGTACAAACTTCAATCGACGTCAATTTCTGGGAAAGGAGCCTTCGTGGAGGAGTGAAGTACTT
AGAGGCTTCCCGACAAAAAGATTTGATGGCAGCAGTTAGAGAGGGAGTTGACACTCTTTTAATGTGCCTATATAGAACTTTAAATTCTATTGACGAGATGGAAAAACTGG
CATCTTCGGCAAATAGTTGCGTTGTGACGGATTTCCCAAGTGGTGGCTGTAACTTTCCGAATGTAGTAACTAAAACTATCTCTAATGAAGAAACATCCAGAAGCTTGAGC
AACCTACCTAGACTCACCAACATGCCTTCCACCGTCTCCATAGATGCTGAAACAGAAGATCCATGGGACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCGAGCTCCGGCGAAGCATGGCTGCGGAGTCTGTCCGACGGCGTACAAACTTCAATCGACGTCAATTTCTGGGAAAGGAGCCTTCGTGGAGGAGTGAAGTACTT
AGAGGCTTCCCGACAAAAAGATTTGATGGCAGCAGTTAGAGAGGGAGTTGACACTCTTTTAATGTGCCTATATAGAACTTTAAATTCTATTGACGAGATGGAAAAACTGG
CATCTTCGGCAAATAGTTGCGTTGTGACGGATTTCCCAAGTGGTGGCTGTAACTTTCCGAATGTAGTAACTAAAACTATCTCTAATGAAGAAACATCCAGAAGCTTGAGC
AACCTACCTAGACTCACCAACATGCCTTCCACCGTCTCCATAGATGCTGAAACAGAAGATCCATGGGACATTTGA
Protein sequenceShow/hide protein sequence
MSASSGEAWLRSLSDGVQTSIDVNFWERSLRGGVKYLEASRQKDLMAAVREGVDTLLMCLYRTLNSIDEMEKLASSANSCVVTDFPSGGCNFPNVVTKTISNEETSRSLS
NLPRLTNMPSTVSIDAETEDPWDI