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Spg009398 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009398
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein TIC 214
Genome locationscaffold166:44047..45880
RNA-Seq ExpressionSpg009398
SyntenySpg009398
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7012819.1 unnamed protein product [Microthlaspi erraticum]1.2e-3688.04Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEG+R LVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDT   GTPGN SSGDGVG VAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

CAA7013171.1 unnamed protein product [Microthlaspi erraticum]1.1e-3789.13Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDT   GTPGN SSGDGVG VAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

CAA7014164.1 unnamed protein product [Microthlaspi erraticum]1.1e-3789.13Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDT   GTPGN SSGDGVG VAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

KAD7480171.1 hypothetical protein E3N88_03307 [Mikania micrantha]1.1e-3766.43Show/hide
Query:  FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPRYPDCGTKD-YPGPTPRALLSLPSPSSGY----
        F+SCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT   GT GNRSSGD VGPV QRIRARGYEPR P    +  +P   P        PS  +    
Subjt:  FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPRYPDCGTKD-YPGPTPRALLSLPSPSSGY----

Query:  -----GRRNREESISNNRFYYGTAHDVHIDLLCASASSIG
              +  REE ISNN FYYGTAH VHIDLLCASASS G
Subjt:  -----GRRNREESISNNRFYYGTAHDVHIDLLCASASSIG

PPS02855.1 hypothetical protein GOBAR_AA17807 [Gossypium barbadense]1.9e-3763.23Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR------
        MEG+RPLVSPPVKNWGL ITSQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDT   GTPGNRSSGD VGPVAQRIRARGYEPR      
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR------

Query:  ------------YP----DCGTKDYPGPTPRALLSLPSPSSGYGRRNREESISNN
                    +P    D GTKDYPG   R     P+ S     R+  E + NN
Subjt:  ------------YP----DCGTKDYPGPTPRALLSLPSPSSGYGRRNREESISNN

TrEMBL top hitse value%identityAlignment
A0A2P5XHN3 Uncharacterized protein9.3e-3863.23Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR------
        MEG+RPLVSPPVKNWGL ITSQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDT   GTPGNRSSGD VGPVAQRIRARGYEPR      
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR------

Query:  ------------YP----DCGTKDYPGPTPRALLSLPSPSSGYGRRNREESISNN
                    +P    D GTKDYPG   R     P+ S     R+  E + NN
Subjt:  ------------YP----DCGTKDYPGPTPRALLSLPSPSSGYGRRNREESISNN

A0A5N6Q8H4 Uncharacterized protein5.4e-3866.43Show/hide
Query:  FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPRYPDCGTKD-YPGPTPRALLSLPSPSSGY----
        F+SCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT   GT GNRSSGD VGPV QRIRARGYEPR P    +  +P   P        PS  +    
Subjt:  FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPRYPDCGTKD-YPGPTPRALLSLPSPSSGY----

Query:  -----GRRNREESISNNRFYYGTAHDVHIDLLCASASSIG
              +  REE ISNN FYYGTAH VHIDLLCASASS G
Subjt:  -----GRRNREESISNNRFYYGTAHDVHIDLLCASASSIG

A0A6D2HB29 Uncharacterized protein5.4e-3889.13Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDT   GTPGN SSGDGVG VAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

A0A6D2K9K4 Uncharacterized protein5.4e-3889.13Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDT   GTPGN SSGDGVG VAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

A0A6N2NAY5 Uncharacterized protein3.4e-4092.39Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR
        MEGQRPLVSP VKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DT   G PGNRSSGD VGPVAQRIRARGYEPR
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDT---GTPGNRSSGDGVGPVAQRIRARGYEPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGGTACCCCCGGGAACAGATCCAGTGGAGACGGGG
TGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGGGCCCTCTTATCTCTTCCT
TCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGC
ATCTAGCATTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGGTACCCCCGGGAACAGATCCAGTGGAGACGGGG
TGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGGGCCCTCTTATCTCTTCCT
TCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGC
ATCTAGCATTGGGTAG
Protein sequenceShow/hide protein sequence
MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTGTPGNRSSGDGVGPVAQRIRARGYEPRYPDCGTKDYPGPTPRALLSLP
SPSSGYGRRNREESISNNRFYYGTAHDVHIDLLCASASSIG