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Spg009456 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009456
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:40345260..40348934
RNA-Seq ExpressionSpg009456
SyntenySpg009456
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5464386.1 hypothetical protein F2P56_014464 [Juglans regia]1.4e-0938.04Show/hide
Query:  PLQHNWV----FSPPRTPRHRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH
        P    W+    F+   +P  + G +   + + ++  F   ID CELLDLGF+G  FT CN R   + + ER+D C++NL W+ALF M  V+H
Subjt:  PLQHNWV----FSPPRTPRHRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]1.2e-0850Show/hide
Query:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        KA   +L F GA+  C LLDLGF+G  FT  NGRP VE V ERID   +N  W  LFP   V HL  +  D+
Subjt:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

XP_040987679.1 uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia]2.4e-0933.66Show/hide
Query:  PLQHNWV----FSPPRTPRHRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        P    W+    F+   +   + G + S  ++ ++  F+  +D+CEL+DLGF+G  FT CN R   + + ER+D C+++L W+A FPM +V H      D+
Subjt:  PLQHNWV----FSPPRTPRHRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

Query:  T
        T
Subjt:  T

XP_041011336.1 uncharacterized protein LOC121255118 [Juglans microcarpa x Juglans regia]8.2e-1042.47Show/hide
Query:  HRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH
        +++ S    +++ ++  F   +D+CELLDLGF+G  FT CN R    ++ ER+D C++NL W+ALFPM +V H
Subjt:  HRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH

XP_042962369.1 uncharacterized protein LOC122296631 [Carya illinoinensis]1.4e-0944.93Show/hide
Query:  SKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH
        S   AK E +L  F   +++C++ D+GFRG  FT CNGR   +T+ ER+D C SNL W + +PM  V H
Subjt:  SKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTH

TrEMBL top hitse value%identityAlignment
A0A2N9EK22 Uncharacterized protein1.7e-0839.73Show/hide
Query:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        A+ + ++ GF  A+D C L+DL +RG  FT CN R    T W R+D  ++N+ W   FPM +V H+D +  D+
Subjt:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

A0A2N9ES30 Reverse transcriptase domain-containing protein9.8e-0943.06Show/hide
Query:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        + + ++ GF  A+D+C+L+DLGFRG  FT CN R    T W R+D  ++NL W   FP   V HLD    D+
Subjt:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

A0A2N9FD36 Reverse transcriptase domain-containing protein5.7e-0943.06Show/hide
Query:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        + + ++ GF  A+D+C+LLDLG+RG  FT CN R    T W R+D  ++NL+W   FP   V HLD    D+
Subjt:  KAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

A0A2N9G3I8 Reverse transcriptase domain-containing protein1.7e-0839.73Show/hide
Query:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        A+ + ++ GF  A+D C L+DL +RG  FT CN R    T W R+D  ++N+ W   FPM +V H+D +  D+
Subjt:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

A0A2N9HFT1 Uncharacterized protein7.5e-0942.47Show/hide
Query:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN
        +K E ++  F  A+D C  +DLG+ G  FT CN R    TVWE++D  +++ AW ALFP   V HLD+   D+
Subjt:  AKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGGAAAGCGTCGAGACGCCGCGAACATTACACTTCGGCCAGATCTAGCGTCGACGTCGAGACGCCAAGGCCGGCATCTCGACGCCAGCCTCAAATCTCAACTTG
CTGCTTAATTTCTCGGCTTTGTCTCACTTCCGCTCAGTTCAGGGCTTCAATCTTCGACTTTCAGTGTCGTTCTTTAGGCCCTCTTCAGCACAATTGGGTCTTTTCACCTT
CTCGTCGTCCAAGACACCGAGATGGCTCCAAAACTCCCTTTCACACTACAGTGCAGGGACCCATAACCCGAGTTTTACTCTTGCTTGGCCTAACTGATCACACTGCAGGC
CCGCTTCAGCACAATTGGGTCTTTTCACCTCCTCGCACTCCAAGACACCGAGATGGTTCCAAAGCATCGGCTAAGGCGGAGGATGAGTTGTTAGGTTTTGAGGGTGCAAT
TGATAAGTGTGAGCTACTTGATCTTGGTTTCAGGGGTGTTGCTTTCACTTTGTGCAATGGGAGGCCGAGAGTGGAAACAGTATGGGAGAGGATTGATATATGCATGAGCA
ACTTGGCATGGGAGGCCTTGTTTCCGATGCATGAGGTGACTCATCTGGATTTTAACACTCATGATAACACACACGGTGGAAATGAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGGAAAGCGTCGAGACGCCGCGAACATTACACTTCGGCCAGATCTAGCGTCGACGTCGAGACGCCAAGGCCGGCATCTCGACGCCAGCCTCAAATCTCAACTTG
CTGCTTAATTTCTCGGCTTTGTCTCACTTCCGCTCAGTTCAGGGCTTCAATCTTCGACTTTCAGTGTCGTTCTTTAGGCCCTCTTCAGCACAATTGGGTCTTTTCACCTT
CTCGTCGTCCAAGACACCGAGATGGCTCCAAAACTCCCTTTCACACTACAGTGCAGGGACCCATAACCCGAGTTTTACTCTTGCTTGGCCTAACTGATCACACTGCAGGC
CCGCTTCAGCACAATTGGGTCTTTTCACCTCCTCGCACTCCAAGACACCGAGATGGTTCCAAAGCATCGGCTAAGGCGGAGGATGAGTTGTTAGGTTTTGAGGGTGCAAT
TGATAAGTGTGAGCTACTTGATCTTGGTTTCAGGGGTGTTGCTTTCACTTTGTGCAATGGGAGGCCGAGAGTGGAAACAGTATGGGAGAGGATTGATATATGCATGAGCA
ACTTGGCATGGGAGGCCTTGTTTCCGATGCATGAGGTGACTCATCTGGATTTTAACACTCATGATAACACACACGGTGGAAATGAGAAATGA
Protein sequenceShow/hide protein sequence
MPRKASRRREHYTSARSSVDVETPRPASRRQPQISTCCLISRLCLTSAQFRASIFDFQCRSLGPLQHNWVFSPSRRPRHRDGSKTPFHTTVQGPITRVLLLLGLTDHTAG
PLQHNWVFSPPRTPRHRDGSKASAKAEDELLGFEGAIDKCELLDLGFRGVAFTLCNGRPRVETVWERIDICMSNLAWEALFPMHEVTHLDFNTHDNTHGGNEK