; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009513 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009513
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease P
Genome locationscaffold9:25584262..25592004
RNA-Seq ExpressionSpg009513
SyntenySpg009513
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000172 - ribonuclease MRP complex (cellular component)
GO:0005655 - nucleolar ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]6.5e-6886.27Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNKD+  DDPIIITQYNVSKAIKDSILLNFGECGFAS+LGS +V YVNPITK+CIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDLSGNTRACKNTALRL+ LKFE+YKLMVG +L D+VNLQM NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

XP_022932062.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata]4.0e-7088.24Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDL+GN+RACKNTALRLDELKFE+YKLMVGP +SD VNLQM NCLEKIR L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]6.9e-7087.58Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP +SD VNLQM NCLEKIR L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

XP_023524475.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita pepo subsp. pepo]1.4e-7088.24Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRYLV EV LDPNKD+A DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP++SD VNLQMHNCLEKIR L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]4.0e-7089.54Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRY+VLEVLLDPNKD+  DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDLSGNTRACKNTALRLD+LKFE+YKLMVG  L D+VNLQM NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

TrEMBL top hitse value%identityAlignment
A0A1S3CEI9 Ribonuclease P1.7e-6684.97Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNK++  DDPIIITQYNVSKAIKDSILLNFGECGFAS+LGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDLSGNTRACKNTALRLD LKFE+YKLMVG  L D+V + M NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

A0A5D3CDD4 Ribonuclease P4.5e-6785.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNK++  DDPIIITQYNVSKAIKDSILLNFGECGFAS+LGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDLSGNTRACKNTALRLD LKFE+YKLMVG  L D+V +QM NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

A0A6J1CLH1 Ribonuclease P2.5e-6583.33Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVR++NRYL+LEV+LDP KD A DD IIITQYN+SKAIKDSILLNFGECGFAS+LGS +V YVNPITKLCIIR S+EDYQ VWAAITMVRTI NCPV+FN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIR
        LLDL+GNTRACKNTALR +ELKFE+YKLMVG  LSDDVNLQM NCLEKIR
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIR

A0A6J1EVL4 Ribonuclease P2.0e-7088.24Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDL+GN+RACKNTALRLDELKFE+YKLMVGP +SD VNLQM NCLEKIR L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

A0A6J1IBH7 Ribonuclease P3.3e-7087.58Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIITQYNVSKAIKDSILLNFGECGFASSLGS +V YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP +SD VNLQM NCLEKIR L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

SwissProt top hitse value%identityAlignment
Q54EP3 Probable ribonuclease P/MRP protein subunit POP54.0e-1231.36Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        MVR KNRYL+ EV+   N+         + Q+ +S  +K+ +    GE  + +   + K++YVNP T + IIR S E Y+++W A+T++ +    P+ F 
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRL
        ++ + G+ R C+  A+++
Subjt:  LLDLSGNTRACKNTALRL

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP57.2e-4659.74Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        MV FKNRY+++EV LDP+KD+  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGS +V YVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        NLLD+SG  RAC++TAL+ D+ KFE+        LS++   QM+  LEKI+ LE
Subjt:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE

Q969H6 Ribonuclease P/MRP protein subunit POP52.7e-0832.48Show/hide
Query:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C
        MVRFK+RYL+ E++  DP   ++ DD ++      S  ++D+I    G  G A+      V Y+N  T + ++R  +E YQ VW+A+  +  + N     
Subjt:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C

Query:  PVVFNLLDLSGNTRACK
        P  FN L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q9DB28 Ribonuclease P/MRP protein subunit POP52.5e-0629.91Show/hide
Query:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C
        MVRFK+RYL+ E++  D    ++ DD ++         ++D+I    G  G A+      V Y+N  T + ++R  ++ YQ VW+A+  +  + N     
Subjt:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISN----C

Query:  PVVFNLLDLSGNTRACK
        P  FN L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q9UU90 Ribonuclease P/MRP protein subunit POP56.2e-1332.85Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNC
        MVRFK+RYL+ EVL    K+   D P I     IT  ++SK I+  +  NFG+ G      S  V Y +P T   I+R SR+ ++  WAA+ ++R +   
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNC

Query:  PVVFNLLDLSGNTRACKNTALRLDELKFERYKLMVGP
        PV+  ++ +SG  +  +  A+  ++ +     LM  P
Subjt:  PVVFNLLDLSGNTRACKNTALRLDELKFERYKLMVGP

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein5.1e-4759.74Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        MV FKNRY+++EV LDP+KD+  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGS +V YVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE
        NLLD+SG  RAC++TAL+ D+ KFE+        LS++   QM+  LEKI+ LE
Subjt:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNLQMHNCLEKIRRLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCGACGCTACCATTTTTTTCTTCTTCTTCTTTACGCAAGGAGATCCTTGTTGCCGCCGCCTCTCTCCCGTTCACTGCTGTCGCCGCCGTCATCTCTCTTCCACT
CGTCCCGCTGCCATCGTCGTATTTCTTCCGTTCGTCCCGCCGCAGCCTCCGTCCTAGCGATTTTGCACTGATTTTCTACTCTTTGAGGAGTTTGACTTCAGATTGGGGAG
GAGAGATATCTGGTGTTGAAGCCTTAGTCCTTCTGACGGGTTCTCTTGTAGCTCCCTTTTCCGTTGGCTTTTGCACCCTTCTCCCCAAAGTGGAGGAAGACCTGTATCAC
ATTCTTTGGAGCTGTGCCTATGCTCGTGATGTGTGGGATCGGTTTGGTCAGGCTTTTGGGTTGCATGGTATGACTTTTGTTGATCACAGGGAGATGATCGAGGAGTTTCT
CCTCCATCCGCCATTGCTTGCTTTTGCAATCCTCTTTAGTTCCTTCACGAACTGGATTCTGCTTCATCTTCGATTCCTAAGGTATGTTCTAATTGCGATTCCTCTAGTTT
ACGAACCAGATCGATTGGAACATGCTGATGAGATTGATGTGATGATCAAATTAGCAATGGTGAGGTTTAAGAACCGATACTTGGTGCTGGAAGTTCTGTTGGATCCCAAT
AAAGACATTGCAGCAGATGATCCCATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGCATTCTTCTCAACTTCGGAGAGTGTGGTTTTGCTTCCTCACT
TGGATCTTGTAAAGTTGTGTATGTAAATCCAATCACGAAGTTGTGTATTATTAGAGCCTCGAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACCATGGTGAGGACTA
TCAGCAATTGTCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAGGGCTTGCAAAAACACTGCCTTGAGGCTGGATGAATTGAAGTTTGAGCGATACAAGCTT
ATGGTTGGACCTCATCTCTCTGATGATGTCAATCTGCAAATGCACAACTGTCTTGAGAAGATTAGAAGATTAGAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCGACGCTACCATTTTTTTCTTCTTCTTCTTTACGCAAGGAGATCCTTGTTGCCGCCGCCTCTCTCCCGTTCACTGCTGTCGCCGCCGTCATCTCTCTTCCACT
CGTCCCGCTGCCATCGTCGTATTTCTTCCGTTCGTCCCGCCGCAGCCTCCGTCCTAGCGATTTTGCACTGATTTTCTACTCTTTGAGGAGTTTGACTTCAGATTGGGGAG
GAGAGATATCTGGTGTTGAAGCCTTAGTCCTTCTGACGGGTTCTCTTGTAGCTCCCTTTTCCGTTGGCTTTTGCACCCTTCTCCCCAAAGTGGAGGAAGACCTGTATCAC
ATTCTTTGGAGCTGTGCCTATGCTCGTGATGTGTGGGATCGGTTTGGTCAGGCTTTTGGGTTGCATGGTATGACTTTTGTTGATCACAGGGAGATGATCGAGGAGTTTCT
CCTCCATCCGCCATTGCTTGCTTTTGCAATCCTCTTTAGTTCCTTCACGAACTGGATTCTGCTTCATCTTCGATTCCTAAGGTATGTTCTAATTGCGATTCCTCTAGTTT
ACGAACCAGATCGATTGGAACATGCTGATGAGATTGATGTGATGATCAAATTAGCAATGGTGAGGTTTAAGAACCGATACTTGGTGCTGGAAGTTCTGTTGGATCCCAAT
AAAGACATTGCAGCAGATGATCCCATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGCATTCTTCTCAACTTCGGAGAGTGTGGTTTTGCTTCCTCACT
TGGATCTTGTAAAGTTGTGTATGTAAATCCAATCACGAAGTTGTGTATTATTAGAGCCTCGAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACCATGGTGAGGACTA
TCAGCAATTGTCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAGGGCTTGCAAAAACACTGCCTTGAGGCTGGATGAATTGAAGTTTGAGCGATACAAGCTT
ATGGTTGGACCTCATCTCTCTGATGATGTCAATCTGCAAATGCACAACTGTCTTGAGAAGATTAGAAGATTAGAATTCTAG
Protein sequenceShow/hide protein sequence
MLPTLPFFSSSSLRKEILVAAASLPFTAVAAVISLPLVPLPSSYFFRSSRRSLRPSDFALIFYSLRSLTSDWGGEISGVEALVLLTGSLVAPFSVGFCTLLPKVEEDLYH
ILWSCAYARDVWDRFGQAFGLHGMTFVDHREMIEEFLLHPPLLAFAILFSSFTNWILLHLRFLRYVLIAIPLVYEPDRLEHADEIDVMIKLAMVRFKNRYLVLEVLLDPN
KDIAADDPIIITQYNVSKAIKDSILLNFGECGFASSLGSCKVVYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFNLLDLSGNTRACKNTALRLDELKFERYKL
MVGPHLSDDVNLQMHNCLEKIRRLEF