; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009531 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009531
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold9:24577849..24583030
RNA-Seq ExpressionSpg009531
SyntenySpg009531
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34244.1 hypothetical protein [Cucumis melo subsp. melo]2.5e-2856.08Show/hide
Query:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E  N  +S KE+D+S + +QRTS+F+RIK  TTR SVFQR+S+    EEN+C  ST  R SAF+RLS+ TSKK R STS FDRLK+TDDQ QR+
Subjt:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M  L+ K F E + D K+ S+V SSMKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

KAA0025725.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.3e-2855.41Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E N N    +EVD+S + +QRTS+F+RIK  TTR S FQR+S+   +EENQC  ST  R SAF+RLS+ TSKK R STS FDRLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M +L+ K F E + D K++S VSS MKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.5e-2856.08Show/hide
Query:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E  N  +S +EVD+S + +QRTS+F+RIK  TTR SVFQR+S+T  +EENQC  ST TR SAF+ LS+ TSKK R STS FDRLK+ +DQ QR+
Subjt:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M +L+VK F E + D K+ S V S MKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

KAA0062458.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.5e-2856.76Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E + N V SKEVD S + ++RTSIF+RIK STTR SVFQR+S+   +EENQC  S STR SAF+RLS+ TSKK R STSVF+RLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
          +L+ K F E + D K+ S V S MKR  SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

TYK27425.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.5e-2856.76Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E + N V SKEVD S + ++RTSIF+RIK STTR SVFQR+S+   +EENQC  S STR SAF+RLS+ TSKK R STSVF+RLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
          +L+ K F E + D K+ S V S MKR  SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein3.5e-2855.41Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E N N    +EVD+S + +QRTS+F+RIK  TTR S FQR+S+   +EENQC  ST  R SAF+RLS+ TSKK R STS FDRLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M +L+ K F E + D K++S VSS MKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

A0A5A7TGM1 Retrotransposon gag protein4.6e-2856.08Show/hide
Query:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E  N  +S +EVD+S + +QRTS+F+RIK  TTR SVFQR+S+T  +EENQC  ST TR SAF+ LS+ TSKK R STS FDRLK+ +DQ QR+
Subjt:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M +L+VK F E + D K+ S V S MKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

A0A5A7V4E9 Retrotransposon gag protein4.6e-2856.76Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E + N V SKEVD S + ++RTSIF+RIK STTR SVFQR+S+   +EENQC  S STR SAF+RLS+ TSKK R STSVF+RLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
          +L+ K F E + D K+ S V S MKR  SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

A0A5D3DVW2 Retrotransposon gag protein4.6e-2856.76Show/hide
Query:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E + N V SKEVD S + ++RTSIF+RIK STTR SVFQR+S+   +EENQC  S STR SAF+RLS+ TSKK R STSVF+RLK+T+DQ QR+
Subjt:  HLKSQIE-NQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
          +L+ K F E + D K+ S V S MKR  SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

E5GCP7 Uncharacterized protein1.2e-2856.08Show/hide
Query:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK
        H  S +E  N  +S KE+D+S + +QRTS+F+RIK  TTR SVFQR+S+    EEN+C  ST  R SAF+RLS+ TSKK R STS FDRLK+TDDQ QR+
Subjt:  HLKSQIENQNIVES-KEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKSRSSTSVFDRLKVTDDQPQRK

Query:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV
        M  L+ K F E + D K+ S+V SSMKRK SV INTEGSL V   +++
Subjt:  MDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATTTGTTGCCGATGCCGCTGTTGCCGTTGCCTGCGCCGCTGGCTAGAGGAGCTATGGCGTCAACAACGACCACGACGGCTGGAGAAGGTGCGAGAGAGAGAGAG
AGACGATCCGAGGGAGAGAGGCGACGGCGGCGCTCATCGGGCAGAGATTCGATCTGAGACAGCGATTTGCTCTGGTGAACTCAAGTTGCAAGATGATCAAGCTCTTATCA
TCATAAGCAAAGAAACAATATTTTCGGGGGCATGTACTAGTGACAAGTTTCTTGTAAAGTATAACCCTTTGTTCGAGCCTGATTCTGACGTAGTGACTGTCATGATGACT
GAGGCAAGAACTATGAAAAAAAGAATGTCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAGAGATTCTCAAATTGACCACCTAAAGAGCCAGAT
TGAGAACCAAAATATCGTTGAATCAAAAGAAGTTGACGATTCTAAAAAATTTGAACAAAGGACTTCTATTTTCAATCGCATAAAGCTTTCAACTACTCGTCCTTCGGTAT
TCCAGAGAATGAGTCTAACTGCGACAAAAGAAGAAAACCAATGTTTAGTGTCTACCTCCACTCGACCTTCAGCTTTTCAAAGGCTAAGTGTCTTCACATCGAAGAAAAGT
CGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAGATGATCAACCTCAAAGAAAAATGGATAACTTAGAGGTAAAACTGTTTGATGAAGTAAGCAGTGACAAGAA
GCTTCAAAGTATTGTCTCGTCAAGTATGAAAAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTTACGTTGTACGTTGTTGCGTTGTTCCTTCTCC
ATGTTCGAGGGTTCTTACGCTGTAAGCTACTGTGTTGTTCCTTCTCTAAGTTCGAAGGTTCTTACGATGTTCGAAGGTTCTCCGCTCTACGCTGCTGCATTGCTCCTTCT
TCAAGTTCGAAGGTTCTTATGTTGTACGTTGTTGCGTTATTTCTTCTTGAAGTTTTAAGGATCTTACACTGCTTCGTCGTTGTTCCTTCTTCAAGTTTGAGACTTCTCTC
CAGGTTTGAAGGTTCTCACGCTGCTTTGCTGCAATTCCTTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCTCCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTTAC
ACTGCTTCGTCACTGTTCCTTCTTCAAGTTTGAGACTTCTCTCCAAGTTTGAAGGTTCTCACGTTGCTTCGCTTTCATTCCCCAAGTTCGAAGGTTCTCACGCTACTTCG
CTGAAGGAACTTCCTCTAAGTTCGAAGTTTCTCACGTTGTATGTTGCTTGTTCCTTCTCTAAGTTCAAAGATTCTCACGTTGTACTCTACTTCGCTGCTCCTTCTTCAAG
TTTCGAAGGTTCTCACGATTTCGAAGGTTCTCAAAAATTCTCATGTTGCTTCGTTGCGGCTCCAATTCCTTCCTCCAAGTTTGAAAGTTCTCACATTGCTTCGTTGCAGT
TCTTTCCTCCAAGTTCAAAGGTTCTCAGTGCCTTCTCTCCACGTTTAAAGGTTCTCACGCTGCTTCACTGTTGTTCCTTCTCCAAGTTCAAAGGTTCTCACGCTGCTTCT
CTGTTGTTCCTTCTCCAAGTCGAAGATTCTCACGCTACATTGTTTCGCTTGTGTTCCTTCTCCAAGTTTGAAGGTTCTCACGCGCTACACTACTGTTCCTTCTCCAAGTT
CGAAGTTCTTTCCTCCAAGTTCGAAGGTTCTCAATTCCTTCTCTCCACCTTTGAAGGTTCTCATGTTGCTTCGCTGTTGTTCCTTCTCCAAGTTCAAAGATTCTCACGCT
GCTTCGCTGCTGTTCCTTCTCCAAGTCAAAGGTTCTCACGCTGCTTTGTTGTTGTTCCTTTTCCAAATTCAAAGGTTCTCACGCTACGTTGTTCGAAGGTTCTTCCTCTT
ACGCTGCATTGCATCGCTGTTCCTTCTACAAGTTCAAAGGTTCTTAGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATTTGTTGCCGATGCCGCTGTTGCCGTTGCCTGCGCCGCTGGCTAGAGGAGCTATGGCGTCAACAACGACCACGACGGCTGGAGAAGGTGCGAGAGAGAGAGAG
AGACGATCCGAGGGAGAGAGGCGACGGCGGCGCTCATCGGGCAGAGATTCGATCTGAGACAGCGATTTGCTCTGGTGAACTCAAGTTGCAAGATGATCAAGCTCTTATCA
TCATAAGCAAAGAAACAATATTTTCGGGGGCATGTACTAGTGACAAGTTTCTTGTAAAGTATAACCCTTTGTTCGAGCCTGATTCTGACGTAGTGACTGTCATGATGACT
GAGGCAAGAACTATGAAAAAAAGAATGTCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAGAGATTCTCAAATTGACCACCTAAAGAGCCAGAT
TGAGAACCAAAATATCGTTGAATCAAAAGAAGTTGACGATTCTAAAAAATTTGAACAAAGGACTTCTATTTTCAATCGCATAAAGCTTTCAACTACTCGTCCTTCGGTAT
TCCAGAGAATGAGTCTAACTGCGACAAAAGAAGAAAACCAATGTTTAGTGTCTACCTCCACTCGACCTTCAGCTTTTCAAAGGCTAAGTGTCTTCACATCGAAGAAAAGT
CGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAGATGATCAACCTCAAAGAAAAATGGATAACTTAGAGGTAAAACTGTTTGATGAAGTAAGCAGTGACAAGAA
GCTTCAAAGTATTGTCTCGTCAAGTATGAAAAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTTACGTTGTACGTTGTTGCGTTGTTCCTTCTCC
ATGTTCGAGGGTTCTTACGCTGTAAGCTACTGTGTTGTTCCTTCTCTAAGTTCGAAGGTTCTTACGATGTTCGAAGGTTCTCCGCTCTACGCTGCTGCATTGCTCCTTCT
TCAAGTTCGAAGGTTCTTATGTTGTACGTTGTTGCGTTATTTCTTCTTGAAGTTTTAAGGATCTTACACTGCTTCGTCGTTGTTCCTTCTTCAAGTTTGAGACTTCTCTC
CAGGTTTGAAGGTTCTCACGCTGCTTTGCTGCAATTCCTTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCTCCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTTAC
ACTGCTTCGTCACTGTTCCTTCTTCAAGTTTGAGACTTCTCTCCAAGTTTGAAGGTTCTCACGTTGCTTCGCTTTCATTCCCCAAGTTCGAAGGTTCTCACGCTACTTCG
CTGAAGGAACTTCCTCTAAGTTCGAAGTTTCTCACGTTGTATGTTGCTTGTTCCTTCTCTAAGTTCAAAGATTCTCACGTTGTACTCTACTTCGCTGCTCCTTCTTCAAG
TTTCGAAGGTTCTCACGATTTCGAAGGTTCTCAAAAATTCTCATGTTGCTTCGTTGCGGCTCCAATTCCTTCCTCCAAGTTTGAAAGTTCTCACATTGCTTCGTTGCAGT
TCTTTCCTCCAAGTTCAAAGGTTCTCAGTGCCTTCTCTCCACGTTTAAAGGTTCTCACGCTGCTTCACTGTTGTTCCTTCTCCAAGTTCAAAGGTTCTCACGCTGCTTCT
CTGTTGTTCCTTCTCCAAGTCGAAGATTCTCACGCTACATTGTTTCGCTTGTGTTCCTTCTCCAAGTTTGAAGGTTCTCACGCGCTACACTACTGTTCCTTCTCCAAGTT
CGAAGTTCTTTCCTCCAAGTTCGAAGGTTCTCAATTCCTTCTCTCCACCTTTGAAGGTTCTCATGTTGCTTCGCTGTTGTTCCTTCTCCAAGTTCAAAGATTCTCACGCT
GCTTCGCTGCTGTTCCTTCTCCAAGTCAAAGGTTCTCACGCTGCTTTGTTGTTGTTCCTTTTCCAAATTCAAAGGTTCTCACGCTACGTTGTTCGAAGGTTCTTCCTCTT
ACGCTGCATTGCATCGCTGTTCCTTCTACAAGTTCAAAGGTTCTTAGCCCTTAA
Protein sequenceShow/hide protein sequence
MSICCRCRCCRCLRRWLEELWRQQRPRRLEKVRERERDDPRERGDGGAHRAEIRSETAICSGELKLQDDQALIIISKETIFSGACTSDKFLVKYNPLFEPDSDVVTVMMT
EARTMKKRMSEMQEHINTLMKAIEERDSQIDHLKSQIENQNIVESKEVDDSKKFEQRTSIFNRIKLSTTRPSVFQRMSLTATKEENQCLVSTSTRPSAFQRLSVFTSKKS
RSSTSVFDRLKVTDDQPQRKMDNLEVKLFDEVSSDKKLQSIVSSSMKRKFSVLINTEGSLKVLTLYVVALFLLHVRGFLRCKLLCCSFSKFEGSYDVRRFSALRCCIAPS
SSSKVLMLYVVALFLLEVLRILHCFVVVPSSSLRLLSRFEGSHAALLQFLSLQVQRFSRCSAAVPSLQVRRFLHCFVTVPSSSLRLLSKFEGSHVASLSFPKFEGSHATS
LKELPLSSKFLTLYVACSFSKFKDSHVVLYFAAPSSSFEGSHDFEGSQKFSCCFVAAPIPSSKFESSHIASLQFFPPSSKVLSAFSPRLKVLTLLHCCSFSKFKGSHAAS
LLFLLQVEDSHATLFRLCSFSKFEGSHALHYCSFSKFEVLSSKFEGSQFLLSTFEGSHVASLLFLLQVQRFSRCFAAVPSPSQRFSRCFVVVPFPNSKVLTLRCSKVLPL
TLHCIAVPSTSSKVLSP