; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009539 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009539
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:25177947..25183733
RNA-Seq ExpressionSpg009539
SyntenySpg009539
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]1.0e-1837.21Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPGIESAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSL
        FC +PD     VVREFYANV E+      VRG           AQW+ S  E  +F+ + +KKE   W+ F+  RLL +TH S V+++R +L + I+   
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPGIESAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSL

Query:  SIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQEASQGAS
        SIDVGK+I+  I    R K   + FP+ I+ LC RAGV  S ++ +   K  I    L RL+   + +  +S
Subjt:  SIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQEASQGAS

KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]5.5e-1729.33Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPG-----------------------------------IESAQWRLSKTEKRTFQAAYLKKEA
        F   P  VN+ VV+EFYAN+ +     + VRG  + ++P                                     E+ +W   +T + +     L+  A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPG-----------------------------------IESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ
          W  F+K +L+PT++ +TVS  R+LL   I  S  IDVG+II  ++  C  KK   L FPN I+ LC++  V E+A D IL     I    L  L   +
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ

Query:  EASQGASLWHSPDLRTTRTFSQARL
              S+ H   + TT++ ++ARL
Subjt:  EASQGASLWHSPDLRTTRTFSQARL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.2e-1732.84Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA
        FC+ P+     +VREFYAN+ +     V VRG+ V WS                                     +  A+W +S     T   + L   A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ
          W  F+K  LLPTTH  TVS++R+LL   +L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   + R+  TQ
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ

Query:  E
        E
Subjt:  E

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.4e-1832.38Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA
        FC+ P+     +VREFYAN+ + E   V VRG+ V WS                                        A+W +S     T   + L   A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQR--
          W  F+K RLLPTTH  TVS++R+LL   +L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   + R+ +  
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQR--

Query:  -TQEASQGAS
         T+   Q +S
Subjt:  -TQEASQGAS

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]6.1e-1634.07Show/hide
Query:  ELFCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIA-VDWSPGIE--------SAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQER
        E FC      + ++VREFYA++   +  +VIVR  + ++W    +         +QW +      + Q  YLK  A  W  F++   +P +H ST+S E 
Subjt:  ELFCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIA-VDWSPGIE--------SAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQER

Query:  VLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRL-QRTQEASQG
        +LL + IL   SI+VGKII  EI  C +KK    +FP+ I+ LC +A V   A       +G I   +L RL +R  E +QG
Subjt:  VLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRL-QRTQEASQG

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein4.8e-1937.21Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPGIESAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSL
        FC +PD     VVREFYANV E+      VRG           AQW+ S  E  +F+ + +KKE   W+ F+  RLL +TH S V+++R +L + I+   
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPGIESAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSL

Query:  SIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQEASQGAS
        SIDVGK+I+  I    R K   + FP+ I+ LC RAGV  S ++ +   K  I    L RL+   + +  +S
Subjt:  SIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQEASQGAS

A0A2P5AGA5 Uncharacterized protein (Fragment)2.0e-1732.84Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA
        FC+ P+     +VREFYAN+ +     V VRG+ V WS                                     +  A+W +S     T   + L   A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ
          W  F+K  LLPTTH  TVS++R+LL   +L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   + R+  TQ
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ

Query:  E
        E
Subjt:  E

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-1832.38Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA
        FC+ P+     +VREFYAN+ + E   V VRG+ V WS                                        A+W +S     T   + L   A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSP-----------------------------------GIESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQR--
          W  F+K RLLPTTH  TVS++R+LL   +L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   + R+ +  
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQR--

Query:  -TQEASQGAS
         T+   Q +S
Subjt:  -TQEASQGAS

A0A5D2B8V0 Uncharacterized protein2.9e-1634.07Show/hide
Query:  ELFCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIA-VDWSPGIE--------SAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQER
        E FC      + ++VREFYA++   +  +VIVR  + ++W    +         +QW +      + Q  YLK  A  W  F++   +P +H ST+S E 
Subjt:  ELFCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIA-VDWSPGIE--------SAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQER

Query:  VLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRL-QRTQEASQG
        +LL + IL   SI+VGKII  EI  C +KK    +FP+ I+ LC +A V   A       +G I   +L RL +R  E +QG
Subjt:  VLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRL-QRTQEASQG

A0A6A2YMQ9 Uncharacterized protein2.7e-1729.33Show/hide
Query:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPG-----------------------------------IESAQWRLSKTEKRTFQAAYLKKEA
        F   P  VN+ VV+EFYAN+ +     + VRG  + ++P                                     E+ +W   +T + +     L+  A
Subjt:  FCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPG-----------------------------------IESAQWRLSKTEKRTFQAAYLKKEA

Query:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ
          W  F+K +L+PT++ +TVS  R+LL   I  S  IDVG+II  ++  C  KK   L FPN I+ LC++  V E+A D IL     I    L  L   +
Subjt:  NTWMRFIKQRLLPTTHESTVSQERVLLAFVILRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQ

Query:  EASQGASLWHSPDLRTTRTFSQARL
              S+ H   + TT++ ++ARL
Subjt:  EASQGASLWHSPDLRTTRTFSQARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCCACTACGCTTGAGGTTTCTAAGAAGAAAGCGAAGAAGAAAAGAACGCCTTGTAGAAAGGGAAGCCAAACGGCTTAAAAGGCTGCAAGAGGCCGAGGTTTCCGA
AGTATTAGAGAAGGTAATAGAGGACATTGCTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTGAAAAAGAAAAAGATTCTGAGAAGATTGACCGAATGGAGCAAG
AGAGTCAAGAAAAGGCAACAACAGGTTTGCAAGGGCCAGAGAAAGAAGAATCTGAAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACTGAGAAGAAAAAT
GGTGAGGATAAGGACAAAGGTATTGCAGGGGCTGAGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCACAAGTGGTGCGTGAATTCTATGCAAATGTTGACGAATA
CGAGGGTTTCCAAGTTATAGTTCGTGGAATAGCCGTCGACTGGAGTCCAGGAATAGAAAGTGCACAGTGGCGACTGTCAAAAACTGAAAAAAGGACTTTTCAGGCTGCTT
ATTTAAAGAAGGAAGCCAACACTTGGATGAGGTTCATCAAACAAAGGTTGCTTCCAACGACTCATGAGTCCACGGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGTAATA
CTACGGTCCCTTAGCATCGATGTGGGTAAAATTATCGCTGGTGAGATTTTTGGATGTTGGAGAAAAAAGGTTGGAAAATTGTTCTTTCCAAACACAATTTCAATGCTTTG
TAAGAGAGCAGGGGTTCCAGAGAGCGCAGAGGACTTGATCCTACTGGATAAGGGAATAATAGACACGCCTAACTTGACACGACTTCAGCGAACACAGGAAGCGAGTCAGG
GGGCTAGTCTGTGGCATTCACCAGATCTTAGAACAACTCGCACTTTCAGCCAAGCTAGGCTATGGCAAGTTCTTAGGATTGAGTCAAAGGTGGTGATTATTTGTCCATGC
CAGAAGAATTATTTTGCTGCAGCAGTACTTGGTTTTGCAGAATGCTCAGAATGTATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAA
CTGCCACAGGGTGAAGATAGTTCCTGGGAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGACCTACCTCTGATTGGGAAGCTTCAACAGAACAACGCCCAAAGAA
AGGACAAGGCTTCAACTTCCCAAGCTACTCCGCCATCGGGGCTAACACCTGCTTCACCTCCTGAGCACACTCCTATTTTAGGGCCTACACCATCATCAGAGGCCCTTGCA
TTCGCCTTCAGACAGCTAGACCGGATCGAAGACAAGCTAAAAGCTTATTGGGTCTATGTTAAGGAGAGAGATGAATCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAG
CATCGCCCCCGTGTTCCCTGACTTCCCTCAATCGCTGCTGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCCACTACGCTTGAGGTTTCTAAGAAGAAAGCGAAGAAGAAAAGAACGCCTTGTAGAAAGGGAAGCCAAACGGCTTAAAAGGCTGCAAGAGGCCGAGGTTTCCGA
AGTATTAGAGAAGGTAATAGAGGACATTGCTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTGAAAAAGAAAAAGATTCTGAGAAGATTGACCGAATGGAGCAAG
AGAGTCAAGAAAAGGCAACAACAGGTTTGCAAGGGCCAGAGAAAGAAGAATCTGAAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACTGAGAAGAAAAAT
GGTGAGGATAAGGACAAAGGTATTGCAGGGGCTGAGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCACAAGTGGTGCGTGAATTCTATGCAAATGTTGACGAATA
CGAGGGTTTCCAAGTTATAGTTCGTGGAATAGCCGTCGACTGGAGTCCAGGAATAGAAAGTGCACAGTGGCGACTGTCAAAAACTGAAAAAAGGACTTTTCAGGCTGCTT
ATTTAAAGAAGGAAGCCAACACTTGGATGAGGTTCATCAAACAAAGGTTGCTTCCAACGACTCATGAGTCCACGGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGTAATA
CTACGGTCCCTTAGCATCGATGTGGGTAAAATTATCGCTGGTGAGATTTTTGGATGTTGGAGAAAAAAGGTTGGAAAATTGTTCTTTCCAAACACAATTTCAATGCTTTG
TAAGAGAGCAGGGGTTCCAGAGAGCGCAGAGGACTTGATCCTACTGGATAAGGGAATAATAGACACGCCTAACTTGACACGACTTCAGCGAACACAGGAAGCGAGTCAGG
GGGCTAGTCTGTGGCATTCACCAGATCTTAGAACAACTCGCACTTTCAGCCAAGCTAGGCTATGGCAAGTTCTTAGGATTGAGTCAAAGGTGGTGATTATTTGTCCATGC
CAGAAGAATTATTTTGCTGCAGCAGTACTTGGTTTTGCAGAATGCTCAGAATGTATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAA
CTGCCACAGGGTGAAGATAGTTCCTGGGAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGACCTACCTCTGATTGGGAAGCTTCAACAGAACAACGCCCAAAGAA
AGGACAAGGCTTCAACTTCCCAAGCTACTCCGCCATCGGGGCTAACACCTGCTTCACCTCCTGAGCACACTCCTATTTTAGGGCCTACACCATCATCAGAGGCCCTTGCA
TTCGCCTTCAGACAGCTAGACCGGATCGAAGACAAGCTAAAAGCTTATTGGGTCTATGTTAAGGAGAGAGATGAATCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAG
CATCGCCCCCGTGTTCCCTGACTTCCCTCAATCGCTGCTGCCTTAA
Protein sequenceShow/hide protein sequence
MCPLRLRFLRRKRRRKERLVEREAKRLKRLQEAEVSEVLEKVIEDIAEEVIAEEEPKDSEKEKDSEKIDRMEQESQEKATTGLQGPEKEESENQEEIGKKIAEDETEKKN
GEDKDKGIAGAEELFCSKPDPVNSQVVREFYANVDEYEGFQVIVRGIAVDWSPGIESAQWRLSKTEKRTFQAAYLKKEANTWMRFIKQRLLPTTHESTVSQERVLLAFVI
LRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEDLILLDKGIIDTPNLTRLQRTQEASQGASLWHSPDLRTTRTFSQARLWQVLRIESKVVIICPC
QKNYFAAAVLGFAECSECIAERLEGAKSVIQQSREQNCHRVKIVPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPPSGLTPASPPEHTPILGPTPSSEALA
FAFRQLDRIEDKLKAYWVYVKERDESIREFYLSIAPSIAPVFPDFPQSLLP