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Spg009573 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009573
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontetratricopeptide repeat protein 5-like
Genome locationscaffold7:4618587..4622676
RNA-Seq ExpressionSpg009573
SyntenySpg009573
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034605.1 tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo var. makuwa]4.6e-4797.92Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKC
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQGKC
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKC

KAG7032049.1 Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4694.85Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKCY
        EQRK+PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLAL+KRPEKKLLCQLSMLERK+AQGKC+
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKCY

TYK09157.1 tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo var. makuwa]1.5e-4597.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

XP_008446682.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X1 [Cucumis melo]1.5e-4597.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

XP_008446683.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X2 [Cucumis melo]1.5e-4597.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

TrEMBL top hitse value%identityAlignment
A0A1S3BF62 tetratricopeptide repeat protein 5-like isoform X27.2e-4697.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

A0A1S3BFP3 tetratricopeptide repeat protein 5-like isoform X37.2e-4697.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

A0A1S3BGG9 tetratricopeptide repeat protein 5-like isoform X17.2e-4697.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

A0A5A7SZG5 Tetratricopeptide repeat protein 5-like isoform X32.2e-4797.92Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKC
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQGKC
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGKC

A0A5D3CAY6 Tetratricopeptide repeat protein 5-like isoform X37.2e-4697.87Show/hide
Query:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG
        EQRK+PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERK+AQG
Subjt:  EQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQG

SwissProt top hitse value%identityAlignment
Q0P5H9 Tetratricopeptide repeat protein 52.9e-1243.75Show/hide
Query:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI
        L+ +EE   +    A    L GK L+V P+Y  +AE+ LSKAVKL P L +AW  LG   WKKGD+++A  CF+ AL     K  L  LSM+ R++
Subjt:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI

Q5BK48 Tetratricopeptide repeat protein 55.9e-1345.83Show/hide
Query:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI
        LR +EE   +    A    L+GK L+V P+Y  EAE  LSKAVKL P L +AW  LG   WKKGD+++A  CF+ AL     K  L  LSM+ R++
Subjt:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI

Q8N0Z6 Tetratricopeptide repeat protein 52.3e-1243.75Show/hide
Query:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI
        L+ +EE   +   +A    L GK L+V P+Y  +AE+ LSKAVKL P L +AW  LG   WKKGD+++A  CF+ AL     K  L  LSM+ R++
Subjt:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI

Q99LG4 Tetratricopeptide repeat protein 55.9e-1345.83Show/hide
Query:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI
        L+ +EE   +    A    L+GK L+V P+Y  EAE  LSKAVKL P L +AW  LG   WKKGD++SA  CF+ AL     K  L  LSM+ R++
Subjt:  LRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTGACCGACCCCCATGGGGGTTGGCTTTAAAGGTTGTGGCTGATCCTCATGGGGGTCGGCCCTTGATGCCTTTGGGTCAACCCCTCGAGGCCTTTGAGTCGAC
CCTTCGTGGTGCCTCTTATCGCGTGATCTCATCCGTGAAGGGTGAGTCCACCATATCCAGGAGATCTGAACCAAAGTGTGTTTTCTCGTTCGACCACCATCATGGACCAG
GGTTCTTGTACAACGGGACCGAGTTCTATGGGATGTGCTTCGGTCTCTGCTATTATGCTCCGTGCGTGAGGGCTGACTCCTTGCCTGGGATAACGTCTCTCGCAGATCAT
GGCATGTTGATCTTCTGTCATTGCCTCCTAGCTTCAATTTCTCCACTAGATGTGGATTGTGGGTCCGAGACTCTCCCTGTCCTTTTTCCACCAGGCATTTTCCTTTGGCT
GGGTTGTGGGGAGGAACTTCGGGTCCTAGAAGAACAAAGGAAAACACCTTTGCAGCGTGCCATGTATGAATACCTAAGAGGAAAAATGTTGGATGTATTTCCAGAATATA
GAAAAGAAGCAGAGGATCATCTCTCAAAAGCTGTTAAGTTGAATCCATCCCTTGCCGATGCATGGCTGTGTTTAGGTAACTGCATTTGGAAAAAAGGAGATCTATCTTCA
GCAAAGAACTGCTTTACTTTAGCATTAAACAAGCGCCCTGAGAAAAAGTTACTTTGTCAGTTATCAATGCTTGAAAGGAAAATAGCTCAAGGCAAGTGTTATATCTTCTT
CTTTCATTGTAACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTGACCGACCCCCATGGGGGTTGGCTTTAAAGGTTGTGGCTGATCCTCATGGGGGTCGGCCCTTGATGCCTTTGGGTCAACCCCTCGAGGCCTTTGAGTCGAC
CCTTCGTGGTGCCTCTTATCGCGTGATCTCATCCGTGAAGGGTGAGTCCACCATATCCAGGAGATCTGAACCAAAGTGTGTTTTCTCGTTCGACCACCATCATGGACCAG
GGTTCTTGTACAACGGGACCGAGTTCTATGGGATGTGCTTCGGTCTCTGCTATTATGCTCCGTGCGTGAGGGCTGACTCCTTGCCTGGGATAACGTCTCTCGCAGATCAT
GGCATGTTGATCTTCTGTCATTGCCTCCTAGCTTCAATTTCTCCACTAGATGTGGATTGTGGGTCCGAGACTCTCCCTGTCCTTTTTCCACCAGGCATTTTCCTTTGGCT
GGGTTGTGGGGAGGAACTTCGGGTCCTAGAAGAACAAAGGAAAACACCTTTGCAGCGTGCCATGTATGAATACCTAAGAGGAAAAATGTTGGATGTATTTCCAGAATATA
GAAAAGAAGCAGAGGATCATCTCTCAAAAGCTGTTAAGTTGAATCCATCCCTTGCCGATGCATGGCTGTGTTTAGGTAACTGCATTTGGAAAAAAGGAGATCTATCTTCA
GCAAAGAACTGCTTTACTTTAGCATTAAACAAGCGCCCTGAGAAAAAGTTACTTTGTCAGTTATCAATGCTTGAAAGGAAAATAGCTCAAGGCAAGTGTTATATCTTCTT
CTTTCATTGTAACCTTTAG
Protein sequenceShow/hide protein sequence
MGCDRPPWGLALKVVADPHGGRPLMPLGQPLEAFESTLRGASYRVISSVKGESTISRRSEPKCVFSFDHHHGPGFLYNGTEFYGMCFGLCYYAPCVRADSLPGITSLADH
GMLIFCHCLLASISPLDVDCGSETLPVLFPPGIFLWLGCGEELRVLEEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSS
AKNCFTLALNKRPEKKLLCQLSMLERKIAQGKCYIFFFHCNL