; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009666 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009666
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationscaffold7:6603538..6606785
RNA-Seq ExpressionSpg009666
SyntenySpg009666
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]6.0e-14785.58Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY
        S AAA A       ASTSNATTPRSFETTSSHQ                DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY

Query:  DQGVDDKNAFPSLSHLHLESGNHHRE
        DQG DDKNAFPS+SHLHL+SGNHHRE
Subjt:  DQGVDDKNAFPSLSHLHLESGNHHRE

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]2.2e-14989.68Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL
        S AAA A       ASTSNATTPRSFETTSSHQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKNAFPS+SHL
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL

Query:  HLESGNHHRE
        HL+SGNHHRE
Subjt:  HLESGNHHRE

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]4.5e-15090Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL
        S AAA A       ASTSNATTPRSFETTSSHQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKNAFPS+SHL
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL

Query:  HLESGNHHRE
        HL+SGNHHRE
Subjt:  HLESGNHHRE

XP_022138928.1 protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]5.3e-14388.35Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN
        MLGLRDVLFIAPTPSSLHQQ TQI+SSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP P PP   A EVS+R R ++NLKRTQDFGFGKGDSLI  GGN
Subjt:  MLGLRDVLFIAPTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN

Query:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
        N  DE  +GDAG+ SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
Subjt:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS

Query:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH
        TAA  AAA +ASHASTSNATTPRSFET+S+HQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG+DDKN FPS+SHLH
Subjt:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH

Query:  LESGNHHRE
        LESGNHH +
Subjt:  LESGNHHRE

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]1.5e-15392.23Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQP-PNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSSAALGVSVGIFPLL ATPCLPPPQP PNQTAD+V+DRSRSLENLKRTQDFGFGKGDSL+GG GN
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQP-PNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN

Query:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
        N SDEQ KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
Subjt:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS

Query:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH
        TAAA A       ASTSNATTPRSFETTSSHQDASFKKSLPG VRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQG DDKNAFPS+SHLH
Subjt:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH

Query:  LESGNHHRE
        L+SGNHHR+
Subjt:  LESGNHHRE

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein1.1e-14989.68Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL
        S AAA A       ASTSNATTPRSFETTSSHQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKNAFPS+SHL
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL

Query:  HLESGNHHRE
        HL+SGNHHRE
Subjt:  HLESGNHHRE

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 12.2e-15090Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL
        S AAA A       ASTSNATTPRSFETTSSHQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKNAFPS+SHL
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHL

Query:  HLESGNHHRE
        HL+SGNHHRE
Subjt:  HLESGNHHRE

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 12.9e-14785.58Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP QPP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDE  KGDAG+GSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAAVAAATAASHASTSNATTPRSFETTSSHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY
        S AAA A       ASTSNATTPRSFETTSSHQ                DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY
Subjt:  STAAAVAAATAASHASTSNATTPRSFETTSSHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLY

Query:  DQGVDDKNAFPSLSHLHLESGNHHRE
        DQG DDKNAFPS+SHLHL+SGNHHRE
Subjt:  DQGVDDKNAFPSLSHLHLESGNHHRE

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 12.6e-14388.35Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN
        MLGLRDVLFIAPTPSSLHQQ TQI+SSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP P PP   A EVS+R R ++NLKRTQDFGFGKGDSLI  GGN
Subjt:  MLGLRDVLFIAPTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGN

Query:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
        N  DE  +GDAG+ SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS
Subjt:  NGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQS

Query:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH
        TAA  AAA +ASHASTSNATTPRSFET+S+HQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG+DDKN FPS+SHLH
Subjt:  TAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLH

Query:  LESGNHHRE
        LESGNHH +
Subjt:  LESGNHHRE

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like9.1e-14186.36Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNN
        MLGLRDVLFIAPTPSSLHQ TQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  PPNQ  DE+SDRSRSLENLKRTQDFGFGKGDSLIGGGGN+
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNN

Query:  GSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST
        G D+Q KGD G+GS+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ+T
Subjt:  GSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST

Query:  AAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLHL
        AAA A       ASTSNATTPRSFETTSSHQDASFKKSLPGQV+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQG D KNA PS+SHLHL
Subjt:  AAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLHL

Query:  ESGNHHRE
        ESGNH R+
Subjt:  ESGNHHRE

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 28.2e-3046.75Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSN
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +     +   +++S   + +
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSN

Query:  ATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG
        A             +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG
Subjt:  ATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 11.6e-5447.12Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ   + +D      + R ++  N   TQ   F   +    G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG

Query:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL
         Q          A SH STSN T P+SFET+SS QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K  FPS+
Subjt:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL

Query:  SHLHL-ESGNHH
        S LHL  S N+H
Subjt:  SHLHL-ESGNHH

Q9M2U4 Protein SHI RELATED SEQUENCE 62.5e-3145.3Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTS
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                      SSS   ++ ++ I  QS              S +
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTS

Query:  NATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLS
         +  P    TT+S Q+  F++ LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  GVD   AFP LS
Subjt:  NATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLS

Q9SD40 Protein SHI RELATED SEQUENCE 15.5e-2640.4Show/hide
Query:  GDSLIGGGGNNGSDEQAK-GDAGEGSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAG
        G++   G G   +    + G +G GS  V C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +      T    G S       
Subjt:  GDSLIGGGGNNGSDEQAK-GDAGEGSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAG

Query:  AKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG
         KR R  +P+ S++       + S     N                      P +V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G
Subjt:  AKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG

Q9XGX0 Protein SHORT INTERNODES1.6e-2541.95Show/hide
Query:  IGGGGNNGSDEQAKGDA------GEGSMA-VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSA
        +G G +N S  +  G A      G GS    C+DCGN++KK+C + RCRTCCK RG  C THVKSTWVPAA+RRERQ       ++T        GS   
Subjt:  IGGGGNNGSDEQAKGDA------GEGSMA-VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSA

Query:  GAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGV
          KR R  IP++               STS A T      TS  +  +F    P +V + AVFRC RV+++   E E AY+  V+IGGHVFKG LYDQG 
Subjt:  GAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGV

Query:  DDKNA
         ++++
Subjt:  DDKNA

Arabidopsis top hitse value%identityAlignment
AT3G54430.1 SHI-related sequence 61.8e-3245.3Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTS
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                      SSS   ++ ++ I  QS              S +
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTS

Query:  NATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLS
         +  P    TT+S Q+  F++ LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  GVD   AFP LS
Subjt:  NATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLS

AT4G36260.1 Lateral root primordium (LRP) protein-related5.8e-3146.75Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSN
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +     +   +++S   + +
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSN

Query:  ATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG
        A             +ASF    PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG
Subjt:  ATTPRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG

AT5G12330.1 Lateral root primordium (LRP) protein-related1.2e-5547.12Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ   + +D      + R ++  N   TQ   F   +    G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG

Query:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL
         Q          A SH STSN T P+SFET+SS QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K  FPS+
Subjt:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL

Query:  SHLHL-ESGNHH
        S LHL  S N+H
Subjt:  SHLHL-ESGNHH

AT5G12330.2 Lateral root primordium (LRP) protein-related1.2e-5547.12Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ   + +D      + R ++  N   TQ   F   +    G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG

Query:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL
         Q          A SH STSN T P+SFET+SS QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K  FPS+
Subjt:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL

Query:  SHLHL-ESGNHH
        S LHL  S N+H
Subjt:  SHLHL-ESGNHH

AT5G12330.4 Lateral root primordium (LRP) protein-related1.2e-5547.12Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ   + +D      + R ++  N   TQ   F   +    G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGG

Query:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP
          +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++  
Subjt:  GGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIP

Query:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL
         Q          A SH STSN T P+SFET+SS QD    +++ PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K  FPS+
Subjt:  SQSTAAAVAAATAASHASTSNATTPRSFETTSSHQD-ASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSL

Query:  SHLHL-ESGNHH
        S LHL  S N+H
Subjt:  SHLHL-ESGNHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGGTCTCAGAGATGTTCTGTTTATAGCTCCCACGCCTTCTTCTCTTCACCAACAGACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTGCCCTCCTC
CGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCACTTTTGGCGGCTACCCCATGTCTCCCGCCGCCGCAGCCGCCCAATCAGACGGCCGACGAAGTTAGCGATCGCAGTC
GGAGTTTGGAGAATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGTGGCGGCGGAAATAATGGCTCCGACGAGCAGGCGAAAGGCGACGCC
GGCGAGGGTTCTATGGCTGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTAC
GCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGGTCTTCTGGTTCTT
CCTCTGCTGGTGCTAAAAGACCTAGAGTTTTGATTCCTTCACAGAGTACTGCCGCCGCGGTCGCCGCCGCCACCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACC
CCACGGAGCTTTGAAACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCACCGGCCGTGTTCCGGTGCCATAGAGTGACAGCCAT
CAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGTTGATGACAAAAATGCATTCCCAT
CTCTTTCACACCTCCATTTGGAAAGTGGTAATCACCACAGGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGGTCTCAGAGATGTTCTGTTTATAGCTCCCACGCCTTCTTCTCTTCACCAACAGACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTGCCCTCCTC
CGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCACTTTTGGCGGCTACCCCATGTCTCCCGCCGCCGCAGCCGCCCAATCAGACGGCCGACGAAGTTAGCGATCGCAGTC
GGAGTTTGGAGAATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGTGGCGGCGGAAATAATGGCTCCGACGAGCAGGCGAAAGGCGACGCC
GGCGAGGGTTCTATGGCTGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTAC
GCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGGTCTTCTGGTTCTT
CCTCTGCTGGTGCTAAAAGACCTAGAGTTTTGATTCCTTCACAGAGTACTGCCGCCGCGGTCGCCGCCGCCACCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACC
CCACGGAGCTTTGAAACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCACCGGCCGTGTTCCGGTGCCATAGAGTGACAGCCAT
CAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGTTGATGACAAAAATGCATTCCCAT
CTCTTTCACACCTCCATTTGGAAAGTGGTAATCACCACAGGGAATAG
Protein sequenceShow/hide protein sequence
MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDA
GEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATT
PRSFETTSSHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVDDKNAFPSLSHLHLESGNHHRE