; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009679 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009679
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:5794739..5795944
RNA-Seq ExpressionSpg009679
SyntenySpg009679
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4360260.1 hypothetical protein F8388_020551 [Cannabis sativa]7.6e-4130.21Show/hide
Query:  IPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKE-TEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK
        IPI + Q +D +IW     G + VKS YR+G      L  +  SN E     WK  W  ++PP++K+ GW++    LP++ NL  +G+ ++P C LC  +
Subjt:  IPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKE-TEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK

Query:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRN-PDLLQKQIERYLREF
         E+  H  W C   K +W    +   C +LN    +        S +   +    ED +K    I W IWE RN+ ++N    N   LL      Y    
Subjt:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRN-PDLLQKQIERYLREF

Query:  IPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIP-LQSQPVQVE
         P + D     +   T     + WI P  G   +NCDAA + G    GTG++ RN  G L+ AG     +   +   EA AI++ L  +P     P++++
Subjt:  IPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIP-LQSQPVQVE

Query:  SDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL
        SD   +V  I   D   T ++  I + +  +++ N +SI HV+R +N  AH LA++      + ++T PFP WL
Subjt:  SDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL

XP_030477911.1 uncharacterized protein LOC115694948 [Cannabis sativa]3.8e-4028.91Show/hide
Query:  NWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAG
        N   DD +IWH  + G+++VKS + L      QL +STS      D WK+FW  K+PPK+++  WK++  ILPT   L K+ +  +  C LC    ES G
Subjt:  NWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAG

Query:  HLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFIPSE--
        H  + C+  K +W    +  D    N  +S    DY         S  +N++  +    + W +W  RN++FH  ++R+   +      +  +F  ++  
Subjt:  HLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFIPSE--

Query:  ----GDSGVKHDQEGTSTRAPST---WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPV
              +G  H  +  S+   S    W PP+   +KLN DAA +      G G +LR+  G +V A  + V  +++   +EA ++   L  A   Q    
Subjt:  ----GDSGVKHDQEGTSTRAPST---WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPV

Query:  QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRND
         +E+D+L+V   +N    + +  S+ I + + L+       +SHV R  N  AH LAK A  L+  I W    P+PI+    ND
Subjt:  QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRND

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]1.0e-3728.88Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        + IP+      D   WH D+ G ++VKS Y L  +  ++  +S+S+++E    W+ FW   +P KV++ GW++ ++ LP   NL  + V  +  C LC  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  KEESAGHLFWECKATKILWVNYLYPTD---CFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYL
          ES GH  + C   K +W +  +  D     F+ D       DY         S    +  L+K     W IW  RN   H +Q ++P  +  Q E YL
Subjt:  KEESAGHLFWECKATKILWVNYLYPTD---CFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYL

Query:  REFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPV
          F   +  +           R    W+PP E   K+N DAA     +  G G ++R+ +G ++ A  + V   +K   +EA A+  GL+ A  LQ QP 
Subjt:  REFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPV

Query:  QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP
         VE+D L +V  + G  ++ +   + +E+    +   +   ISHV R  N  AH LAK+A  L+   +W +  P
Subjt:  QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]1.2e-3829.44Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        + IP+      D  IWH +  G ++VKS Y L  +  ++ + S+S ++ET   WK FW   +P KV++ GWK+ ++ LP   NL  + V  +  C LC  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYC-ECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLRE
          ES GH  + C   K +W N  +  D         +  A Y  +  +    S       L++     W IW  RN   H +Q + P  +  Q E YL  
Subjt:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYC-ECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLRE

Query:  FIPSEGDSGVKHDQEGTSTRAPS-----TWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQS
        F      + V+      + R  +      W PP E + K+N DAA        G G ++R+ SG +V A  +     +K   +EA A+  GL+ A  LQ 
Subjt:  FIPSEGDSGVKHDQEGTSTRAPS-----TWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQS

Query:  QPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP
        Q   VE+D L +V  ING  ++ +   + +++    +   +   ISHV R  N  AH LAK+A  L+   +W +  P
Subjt:  QPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.9e-3931.15Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        ++IP+  +  DD +IW++   G+++VKS Y   ++ + Q + ST SN   E  W  FWK K+PPKV++  WK++H  LP    L ++ +  +P C +C  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF
         EE+  H  + C   K +W    +  D  F    RS STAD        + S   +   L+   ++ W IW  RN I+H    R P  +      YL EF
Subjt:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF

Query:  IPSEGDSGVKHDQEGTSTRA-PST-------WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ
          +   +       G +T + PS+       W  P  GR KLN DAA     +  G G VLRN  G +V A  +     +K   +EA+ +   L  +   
Subjt:  IPSEGDSGVKHDQEGTSTRA-PST-------WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ

Query:  SQPVQ-VESDSLQVVRLINGCDTEETELSNF---IEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP
        +  V  +E+DSL VV+   G  T  + LS F   +     L+       I HVSR  N  AH+LAK A  ++   +W   FP
Subjt:  SQPVQ-VESDSLQVVRLINGCDTEETELSNF---IEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP

TrEMBL top hitse value%identityAlignment
A0A7J6ERF5 Uncharacterized protein3.7e-4130.21Show/hide
Query:  IPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKE-TEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK
        IPI + Q +D +IW     G + VKS YR+G      L  +  SN E     WK  W  ++PP++K+ GW++    LP++ NL  +G+ ++P C LC  +
Subjt:  IPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKE-TEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK

Query:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRN-PDLLQKQIERYLREF
         E+  H  W C   K +W    +   C +LN    +        S +   +    ED +K    I W IWE RN+ ++N    N   LL      Y    
Subjt:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRN-PDLLQKQIERYLREF

Query:  IPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIP-LQSQPVQVE
         P + D     +   T     + WI P  G   +NCDAA + G    GTG++ RN  G L+ AG     +   +   EA AI++ L  +P     P++++
Subjt:  IPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIP-LQSQPVQVE

Query:  SDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL
        SD   +V  I   D   T ++  I + +  +++ N +SI HV+R +N  AH LA++      + ++T PFP WL
Subjt:  SDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL

A0A803NML1 Uncharacterized protein3.7e-4128.32Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        ++IP+  +   D ++WH    G++SVK+ + L      Q  +S++SNK++E  WKFFW  K+PPK+++  WK++  ILPT + L K+ V  +  C LC  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF
          ES GH  + CK  K +W    +  D    +   +    DY         S  + +   +    + W IW  RNK+ H  Q R+P  + +   ++  +F
Subjt:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF

Query:  ------IPSEGDSGVKHDQEGTST--RAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ
              IPS   +   H    TS   +    W PP    +KLN DAA +      G G +LR+  G ++ A  + V  ++K   +EA A+   +  +   
Subjt:  ------IPSEGDSGVKHDQEGTST--RAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ

Query:  SQPV-QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRNDSDI
          P+  +E+D+ +V   +N  +++ +  S+ I + + L+       ++HV R  N  AH LAK A  L+   VW    P+P++     DS++
Subjt:  SQPV-QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRNDSDI

A0A803P5M6 Uncharacterized protein3.1e-4027.81Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        ++IP+  +   D ++WH    G++SVK+ + L      Q  +S++SNK++E  WKFFW  K+PPK+++  WK++  ILPT + L K+ V  +  C LC  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF
          ES GH  + CK  K +W    +  D    +   +    DY         S  + +   +    + W IW  RNK+ H  Q R+P  + +   ++  +F
Subjt:  KEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREF

Query:  IPSE------GDSGVKHDQEGTST--RAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ
          ++        +   H    TS   +    W PP    +KLN DAA +      G G +LR++ G ++ A  + V  ++K   +EA A+   +  +   
Subjt:  IPSE------GDSGVKHDQEGTST--RAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQ

Query:  SQPV-QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRNDSDI
          P+  +E+D+ +V   +N  +++ +  S+ I + + L+       ++HV R  N  AH LAK A  L+   VW    P+P++    NDS++
Subjt:  SQPV-QVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRNDSDI

A0A803QB90 Uncharacterized protein2.4e-4028.79Show/hide
Query:  NWQR-----DDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK
        +W+R     DD +IWH  + G+++VKS + L      QL +STS      D WK+FW  K+PPK+++  WK++  ILPT   L K+ +  +  C LC   
Subjt:  NWQR-----DDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEK

Query:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFI
         ES GH  + C+  K +W    +  D    N  +S    DY         S  +N++  +    + W +W  RN++FH  ++R+   +      +  +F 
Subjt:  EESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFI

Query:  PSE------GDSGVKHDQEGTSTRAPST---WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPL
         ++        +G  H  +  S+   S    W PP+   +KLN DAA +      G G +LR+  G +V A  + V  +++   +EA ++   L  A   
Subjt:  PSE------GDSGVKHDQEGTSTRAPST---WIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPL

Query:  QSQPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRND
        Q     +E+D+L+V   +N    + +  S+ I + + L+       +SHV R  N  AH LAK A  L+  I W    P+PI+    ND
Subjt:  QSQPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQ--PFPIWLQNRND

A0A803QQT2 Uncharacterized protein4.3e-4230.83Show/hide
Query:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE
        + IP  +W  +D ++WH    G +SVKS YR+    S   E   S+       WK  W+ KIPPKVK   WK+ H  LP  +NL K+G+  + VC  C  
Subjt:  MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKE

Query:  K-EESAGHLFWECKATKILW-VNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR
          +ES  H  WECKA+K  W V+ LY       +D +     D      R      W++++L+   ++ W IW  RN + H      P+ + +    +L 
Subjt:  K-EESAGHLFWECKATKILW-VNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR

Query:  EFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPVQ
        +F    GD+G +  Q  +     S W+PPA  +  +N DA    G    G G+V+R+ +G ++ A    + +      LE MAI  G++  I  + Q   
Subjt:  EFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLR-AIPLQSQPVQ

Query:  VESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP
        VE+D LQ V LI   +    ++   +   ++LI   +   IS V R  N +AH+LA  A     S +W    P
Subjt:  VESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFP

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.3e-1122.38Show/hide
Query:  DAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWE
        D + W     G FSV+SAY +       L             +   WK ++P +VK   W + +  + T     ++ +  + VC +CK   ES  H+  +
Subjt:  DAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWE

Query:  CKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNED---RLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFIPSEGDSG
        C A   +WV  +          ++ + +    E  +  +G +   ED       + IIWW  W++R      + T+  D ++   E  +  +    G+  
Subjt:  CKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNED---RLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFIPSEGDSG

Query:  VKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQSQP-VQVESDSLQVVR
        V   Q          W+ P  G  K+N D A          G VLR+ +G         +G+       E   +  GL     +  P V++E DS  +V 
Subjt:  VKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQSQP-VQVESDSLQVVR

Query:  LINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLN
         +    ++   LS  +      +Q+  +  I HV R  N +A  LA  A  L+
Subjt:  LINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEACHLN

Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0625Show/hide
Query:  KFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWECKATKILW----VNYLYPTDCFFLNDRRSWSTADYCECSWREI
        K  W     PK     W      LPT+  L   G+ +   C LC    E   HLF  C+    LW    V    P   F +               W ++
Subjt:  KFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWECKATKILW----VNYLYPTDCFFLNDRRSWSTADYCECSWREI

Query:  GSKGWNEDRLKKSP---------IIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFI
            W   R ++SP          + + IW+ RN   HN +T  P ++ K I+R ++  I
Subjt:  GSKGWNEDRLKKSP---------IIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFI

AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-0725.26Show/hide
Query:  QRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHL
        Q DD+ IW  D     ++ S  +  +        +          +K  W     PK     W +    L TR  L   G+ +  VCLLC   +ES  HL
Subjt:  QRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHL

Query:  FWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCEC-SWREIGSKGWNED---RLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR
        F+EC     +W         FF      +  A    C  W    S+  N     RL     + + IW  RN   H    R  D + K I+  +R
Subjt:  FWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCEC-SWREIGSKGWNED---RLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-1324.29Show/hide
Query:  CLLCKEKEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSW--------REIGSKGWNEDRLKKSPIIWWQIWEYRNKI-FHNQQTRN
        C+ C +  E+  HL ++C   +++W   + P   +       W+ + Y    W         ++G  G         P + W++W+ RN++ F  ++   
Subjt:  CLLCKEKEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSW--------REIGSKGWNEDRLKKSPIIWWQIWEYRNKI-FHNQQTRN

Query:  PDLLQKQIERY-----LREFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKI--AWLE
        P++L++ +E +      RE    EG +     +   S +    W  P     K N DA W   N   G GW+LRN SG ++  G R + +   +  A LE
Subjt:  PDLLQKQIERY-----LREFIPSEGDSGVKHDQEGTSTRAPSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKI--AWLE

Query:  AM--AIIDGLRAIPLQSQPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEA
        A+  A++   R      + +  ESD+  +V L+N  D   T L   +E+ + L+            RG N +A  +A+E+
Subjt:  AM--AIIDGLRAIPLQSQPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSISHVSRGHNGMAHSLAKEA

AT3G25270.1 Ribonuclease H-like superfamily protein3.0e-1123.65Show/hide
Query:  WKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGW-N
        WK K  PK+K   WK+    L T  NL ++ +  +P C  C +++E++ HLF++C   + +W     P        +   +T    E     + S    N
Subjt:  WKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGW-N

Query:  EDRLKKSPIIW--WQIWEYRNKIFHNQQT----------RNPDLLQKQIERYLREFIPSEGDSGVKHDQEGTS----TRAPSTWIPPAEGRWKLNCDAAW
              +  IW  W++W+ RN++   Q++          RN     +    Y++        S  +H Q   +     R PSTWI       K N D A+
Subjt:  EDRLKKSPIIW--WQIWEYRNKIFHNQQT----------RNPDLLQKQIERYLREFIPSEGDSGVKHDQEGTS----TRAPSTWIPPAEGRWKLNCDAAW

Query:  SDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQS-QPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSIS
        +        GW++R+ +G  + +G             E  A+I  ++    Q  + V  E DS QV  L+N  +       N+I E +   +        
Subjt:  SDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQS-QPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLIQERNVDSIS

Query:  HVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL
         V R +N  A  LAK     N S  +    P ++
Subjt:  HVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-0723.83Show/hide
Query:  QRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHL
        Q DD+ +W  D     +  SA R          ++      T    K  W     PK     W +    L TR  L   G+ +   CLLC   ++S  HL
Subjt:  QRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHL

Query:  FWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCEC-SWREIGSKGWNEDRLKKSPI--IWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR
        F+EC+ + ++W         FF         A   +C +W    S+  N   + +       + IW  RN+  H+  +R+ + + K I+  +R
Subjt:  FWECKATKILWVNYLYPTDCFFLNDRRSWSTADYCEC-SWREIGSKGWNEDRLKKSPI--IWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTCCAATTCCTAATTGGCAAAGGGATGATGCTGTTATTTGGCACGAAGATACTAAAGGATTATTCTCGGTTAAAAGTGCATATAGGCTGGGTATTAACCATAG
TCATCAATTAGAAGCATCGACATCGAGCAATAAGGAGACTGAAGACCTTTGGAAATTTTTCTGGAAAGCAAAAATACCCCCCAAAGTTAAGATGTGCGGGTGGAAGATAT
ACCATGCTATTCTTCCTACTCGAATAAATCTTCTCAAAAAAGGGGTGGATGTCAATCCAGTCTGTCTCTTGTGCAAGGAAAAGGAAGAATCAGCGGGCCATCTGTTTTGG
GAGTGTAAAGCGACCAAAATATTATGGGTAAACTACCTTTATCCCACTGACTGTTTCTTTTTAAATGACAGGAGAAGTTGGTCGACGGCAGATTATTGTGAGTGCAGCTG
GAGAGAGATCGGGTCGAAAGGTTGGAATGAAGACAGATTAAAGAAGAGTCCTATCATTTGGTGGCAAATTTGGGAGTATAGAAATAAAATTTTCCACAACCAGCAGACAA
GGAACCCAGATTTATTGCAGAAGCAGATTGAAAGATATCTTAGAGAGTTCATACCTTCGGAGGGCGACTCAGGAGTGAAGCATGATCAGGAGGGGACTTCGACGAGGGCA
CCATCAACGTGGATTCCGCCGGCTGAAGGACGATGGAAACTAAATTGTGATGCGGCTTGGAGTGATGGCAACCATTGTGGAGGGACAGGCTGGGTCCTCCGCAACCGATC
CGGCGATCTCGTTCGTGCAGGCTTTCGAACTGTCGGCAAGGCGTGGAAGATCGCATGGCTTGAAGCGATGGCGATTATTGATGGTCTCCGTGCGATTCCCCTTCAATCTC
AGCCTGTGCAAGTTGAATCTGACTCTCTTCAGGTAGTTCGACTGATCAACGGCTGTGACACTGAGGAAACTGAGCTATCTAACTTTATTGAAGAGGCCAAATCCCTAATC
CAAGAAAGGAATGTTGACTCTATCTCTCATGTTTCTAGAGGTCATAATGGCATGGCCCACAGTTTAGCTAAGGAAGCTTGTCACTTAAATGGCTCCATTGTTTGGACCCA
ACCTTTTCCAATTTGGTTACAAAATCGAAATGATTCGGATATTGGGGTGTCTGGTTACACATGTGGGGGATCCTGTCCCACAGGGAATATCCCTAGTTCTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTCCAATTCCTAATTGGCAAAGGGATGATGCTGTTATTTGGCACGAAGATACTAAAGGATTATTCTCGGTTAAAAGTGCATATAGGCTGGGTATTAACCATAG
TCATCAATTAGAAGCATCGACATCGAGCAATAAGGAGACTGAAGACCTTTGGAAATTTTTCTGGAAAGCAAAAATACCCCCCAAAGTTAAGATGTGCGGGTGGAAGATAT
ACCATGCTATTCTTCCTACTCGAATAAATCTTCTCAAAAAAGGGGTGGATGTCAATCCAGTCTGTCTCTTGTGCAAGGAAAAGGAAGAATCAGCGGGCCATCTGTTTTGG
GAGTGTAAAGCGACCAAAATATTATGGGTAAACTACCTTTATCCCACTGACTGTTTCTTTTTAAATGACAGGAGAAGTTGGTCGACGGCAGATTATTGTGAGTGCAGCTG
GAGAGAGATCGGGTCGAAAGGTTGGAATGAAGACAGATTAAAGAAGAGTCCTATCATTTGGTGGCAAATTTGGGAGTATAGAAATAAAATTTTCCACAACCAGCAGACAA
GGAACCCAGATTTATTGCAGAAGCAGATTGAAAGATATCTTAGAGAGTTCATACCTTCGGAGGGCGACTCAGGAGTGAAGCATGATCAGGAGGGGACTTCGACGAGGGCA
CCATCAACGTGGATTCCGCCGGCTGAAGGACGATGGAAACTAAATTGTGATGCGGCTTGGAGTGATGGCAACCATTGTGGAGGGACAGGCTGGGTCCTCCGCAACCGATC
CGGCGATCTCGTTCGTGCAGGCTTTCGAACTGTCGGCAAGGCGTGGAAGATCGCATGGCTTGAAGCGATGGCGATTATTGATGGTCTCCGTGCGATTCCCCTTCAATCTC
AGCCTGTGCAAGTTGAATCTGACTCTCTTCAGGTAGTTCGACTGATCAACGGCTGTGACACTGAGGAAACTGAGCTATCTAACTTTATTGAAGAGGCCAAATCCCTAATC
CAAGAAAGGAATGTTGACTCTATCTCTCATGTTTCTAGAGGTCATAATGGCATGGCCCACAGTTTAGCTAAGGAAGCTTGTCACTTAAATGGCTCCATTGTTTGGACCCA
ACCTTTTCCAATTTGGTTACAAAATCGAAATGATTCGGATATTGGGGTGTCTGGTTACACATGTGGGGGATCCTGTCCCACAGGGAATATCCCTAGTTCTATCTAA
Protein sequenceShow/hide protein sequence
MNIPIPNWQRDDAVIWHEDTKGLFSVKSAYRLGINHSHQLEASTSSNKETEDLWKFFWKAKIPPKVKMCGWKIYHAILPTRINLLKKGVDVNPVCLLCKEKEESAGHLFW
ECKATKILWVNYLYPTDCFFLNDRRSWSTADYCECSWREIGSKGWNEDRLKKSPIIWWQIWEYRNKIFHNQQTRNPDLLQKQIERYLREFIPSEGDSGVKHDQEGTSTRA
PSTWIPPAEGRWKLNCDAAWSDGNHCGGTGWVLRNRSGDLVRAGFRTVGKAWKIAWLEAMAIIDGLRAIPLQSQPVQVESDSLQVVRLINGCDTEETELSNFIEEAKSLI
QERNVDSISHVSRGHNGMAHSLAKEACHLNGSIVWTQPFPIWLQNRNDSDIGVSGYTCGGSCPTGNIPSSI