; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009836 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009836
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold7:9582848..9586494
RNA-Seq ExpressionSpg009836
SyntenySpg009836
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600024.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.7e-14093.33Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLTSST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQ EN K+VYKRYGCKWKYIHFKGERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]5.5e-13689.59Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        M VYRG+S GFD L PKKDCI N+NKLT RA+S KC H QA Q  TSS   ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK+LFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD

Query:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        K+IEIFADMEELGVKPDEDT+RRVARAFQKLGQEEN+K+V+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]2.2e-14093.33Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLT ST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQEEN K+VYKRYGCKWKYIHFKGERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

XP_022996325.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita maxima]1.4e-13992.96Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLTSST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQEEN K VYKRYGCKWKYIHFK ERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]5.7e-14193.7Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLTSST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQEEN K+VYKRYGCKWKYIHFKGERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

TrEMBL top hitse value%identityAlignment
A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.1e-13489.59Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV  GSSTGFDAL PK DCIY +NK   R +SV CVH QAAQ  TS T  ERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD

Query:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        KIIEIFADMEELGVKPDEDT+RR+ RAFQKLGQEEN+K+VYKRY C+WKYIHFKGERVRVR+DGWDEDD
Subjt:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

A0A5A7UD21 Pentatricopeptide repeat-containing protein1.1e-13489.59Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV  GSSTGFDAL PK DCIY +NK   R +SV CVH QAAQ  TS T  ERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD

Query:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        KIIEIFADMEELGVKPDEDT+RR+ RAFQKLGQEEN+K+VYKRY C+WKYIHFKGERVRVR+DGWDEDD
Subjt:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.7e-13689.59Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        M VYRG+S GFD L PKKDCI N+NKLT RA+S KC H QA Q  TSS   ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK+LFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQD

Query:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        K+IEIFADMEELGVKPDEDT+RRVARAFQKLGQEEN+K+V+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  KIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.0e-14093.33Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLT ST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQEEN K+VYKRYGCKWKYIHFKGERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

A0A6J1K6G2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic6.7e-14092.96Show/hide
Query:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML YRGSSTGFDAL PKK CIYNYNKL  RA+SVKCVHKQAAQSLTSST AERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD
        DKIIEIFADMEELGV+PDEDT+RRVA AF+KLGQEEN K VYKRYGCKWKYIHFK ERVRVRRDGWDEDD
Subjt:  DKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDD

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic5.0e-9278.26Show/hide
Query:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL
        +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLL
Subjt:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL

Query:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG
        AFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVARAF++L QEEN+K++ +RY  ++KYI+F G
Subjt:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG

Query:  ERVRVRR
        ERVRV+R
Subjt:  ERVRVRR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211903.0e-4440.59Show/hide
Query:  YNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILR
        Y  L +R SS K   K+    +  +    R         +  +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL 
Subjt:  YNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILR

Query:  KRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRR
           +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   +  
Subjt:  KRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRR

Query:  VARAFQKLGQEENQKIVYKRY-GCKWKYIHFKGERVRVR
        V + F KL  ++  + + K+Y   +W++ + KG RV+V+
Subjt:  VARAFQKLGQEENQKIVYKRY-GCKWKYIHFKGERVRVR

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-9378.26Show/hide
Query:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL
        +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLL
Subjt:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL

Query:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG
        AFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVARAF++L QEEN+K++ +RY  ++KYI+F G
Subjt:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG

Query:  ERVRVRR
        ERVRV+R
Subjt:  ERVRVRR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein3.6e-9378.26Show/hide
Query:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL
        +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLL
Subjt:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL

Query:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG
        AFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVARAF++L QEEN+K++ +RY  ++KYI+F G
Subjt:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG

Query:  ERVRVRR
        ERVRV+R
Subjt:  ERVRVRR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein3.6e-9378.26Show/hide
Query:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL
        +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLL
Subjt:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL

Query:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG
        AFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVARAF++L QEEN+K++ +RY  ++KYI+F G
Subjt:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG

Query:  ERVRVRR
        ERVRV+R
Subjt:  ERVRVRR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein3.6e-9378.26Show/hide
Query:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL
        +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLL
Subjt:  VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLL

Query:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG
        AFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVARAF++L QEEN+K++ +RY  ++KYI+F G
Subjt:  AFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKG

Query:  ERVRVRR
        ERVRV+R
Subjt:  ERVRVRR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-4540.59Show/hide
Query:  YNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILR
        Y  L +R SS K   K+    +  +    R         +  +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL 
Subjt:  YNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILR

Query:  KRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRR
           +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   +  
Subjt:  KRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDTIRR

Query:  VARAFQKLGQEENQKIVYKRY-GCKWKYIHFKGERVRVR
        V + F KL  ++  + + K+Y   +W++ + KG RV+V+
Subjt:  VARAFQKLGQEENQKIVYKRY-GCKWKYIHFKGERVRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTTACCGTGGAAGCTCAACTGGGTTCGATGCCCTCGCACCCAAGAAAGATTGCATTTACAATTACAACAAATTGACATCTAGAGCTTCCAGTGTCAAGTGTGT
CCACAAGCAAGCGGCACAGTCGCTTACGAGTTCCACCATAGCTGAGAGACGTGTTGTTAAGAAGGTTGGGAAGGAGGCACACCATTTATGGAAGAAAAGAGACTCTGCTG
GCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGTGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTT
CCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGAAAGAGGAGTCAATGGAAGCGTGTTATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAAT
GGGAACATATGACACCCTTCTTCTGGCATTCGATATGGACAAGAGGGTTGACGAAGCCGAATCCTTATGGAACATGATTTTGCACACACATACACGTTCCATCTCTAAGC
GGTTATTTTCTAGGATGATCTCTTTGTATGACCATCATGACTTGCAAGACAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGCGTAAAACCAGATGAAGACACC
ATTAGAAGAGTTGCGCGTGCCTTCCAAAAGCTAGGACAAGAAGAAAACCAGAAAATAGTCTATAAACGATATGGCTGCAAATGGAAATACATACACTTCAAGGGTGAGAG
GGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTTTACCGTGGAAGCTCAACTGGGTTCGATGCCCTCGCACCCAAGAAAGATTGCATTTACAATTACAACAAATTGACATCTAGAGCTTCCAGTGTCAAGTGTGT
CCACAAGCAAGCGGCACAGTCGCTTACGAGTTCCACCATAGCTGAGAGACGTGTTGTTAAGAAGGTTGGGAAGGAGGCACACCATTTATGGAAGAAAAGAGACTCTGCTG
GCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGTGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTT
CCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGAAAGAGGAGTCAATGGAAGCGTGTTATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAAT
GGGAACATATGACACCCTTCTTCTGGCATTCGATATGGACAAGAGGGTTGACGAAGCCGAATCCTTATGGAACATGATTTTGCACACACATACACGTTCCATCTCTAAGC
GGTTATTTTCTAGGATGATCTCTTTGTATGACCATCATGACTTGCAAGACAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGCGTAAAACCAGATGAAGACACC
ATTAGAAGAGTTGCGCGTGCCTTCCAAAAGCTAGGACAAGAAGAAAACCAGAAAATAGTCTATAAACGATATGGCTGCAAATGGAAATACATACACTTCAAGGGTGAGAG
GGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATGGATAA
Protein sequenceShow/hide protein sequence
MLVYRGSSTGFDALAPKKDCIYNYNKLTSRASSVKCVHKQAAQSLTSSTIAERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEF
PLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVKPDEDT
IRRVARAFQKLGQEENQKIVYKRYGCKWKYIHFKGERVRVRRDGWDEDDG