CuGenDBv2

Gene ID	Spg009893
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CSC1-like protein isoform X2
Genome location	scaffold7:6295437..6297721
RNA-Seq Expression	Spg009893
Synteny	Spg009893
Gene Ontology terms	GO:0098655 - cation transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005227 - calcium activated cation channel activity (molecular function)
InterPro domains	IPR045122 - Calcium permeable stress-gated cation channel 1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022138881.1 CSC1-like protein At3g54510 isoform X2 [Momordica charantia]

4.4e-17

58.65

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS
        SLLASAAINIGLAF +LSIF ILKKQP   AIYYARRL LG R+SFEPFTFRRL+PSVAWIPR  + S        + S S     ++ R F+L + F  
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS

Query:  FCGI
         C +
Subjt:  FCGI

XP_038893316.1 CSC1-like protein At3g54510 isoform X1 [Benincasa hispida]

3.0e-18

57.41

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SL ASAAINIGLAF VLSIF ILKKQP   AIYYARRL LGHR+SFEPFTF RL+PSVAWIPR  + S           +  SSG +      R F+L +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F + C +
Subjt:  GFISFCGI

XP_038893317.1 CSC1-like protein At3g54510 isoform X2 [Benincasa hispida]

3.0e-18

57.41

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SL ASAAINIGLAF VLSIF ILKKQP   AIYYARRL LGHR+SFEPFTF RL+PSVAWIPR  + S           +  SSG +      R F+L +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F + C +
Subjt:  GFISFCGI

XP_038893318.1 CSC1-like protein At3g54510 isoform X3 [Benincasa hispida]

3.0e-18

57.41

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SL ASAAINIGLAF VLSIF ILKKQP   AIYYARRL LGHR+SFEPFTF RL+PSVAWIPR  + S           +  SSG +      R F+L +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F + C +
Subjt:  GFISFCGI

XP_038893319.1 CSC1-like protein At3g54510 isoform X4 [Benincasa hispida]

3.0e-18

57.41

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SL ASAAINIGLAF VLSIF ILKKQP   AIYYARRL LGHR+SFEPFTF RL+PSVAWIPR  + S           +  SSG +      R F+L +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F + C +
Subjt:  GFISFCGI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CAR2 CSC1-like protein At3g54510 isoform X1

2.1e-17

58.65

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS
        SLLASAAINIGLAF +LSIF ILKKQP   AIYYARRL LG R+SFEPFTFRRL+PSVAWIPR  + S        + S S     ++ R F+L + F  
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS

Query:  FCGI
         C +
Subjt:  FCGI

A0A6J1CB02 CSC1-like protein At3g54510 isoform X2

2.1e-17

58.65

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS
        SLLASAAINIGLAF +LSIF ILKKQP   AIYYARRL LG R+SFEPFTFRRL+PSVAWIPR  + S        + S S     ++ R F+L + F  
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-RHFRLALGFIS

Query:  FCGI
         C +
Subjt:  FCGI

A0A6J1FZF5 CSC1-like protein At3g54510 isoform X1

1.1e-16

55.56

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SLLASAA+NIGLAF VLSIF ILKKQP   AIYYARRL LG  +SFEPFTFRR LPSV WIPR  + S           +  SSG +      R F+L++
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F   C +
Subjt:  GFISFCGI

A0A6J1FZJ3 CSC1-like protein At3g54510 isoform X2

1.1e-16

55.56

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SLLASAA+NIGLAF VLSIF ILKKQP   AIYYARRL LG  +SFEPFTFRR LPSV WIPR  + S           +  SSG +      R F+L++
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F   C +
Subjt:  GFISFCGI

A0A6J1HPW4 CSC1-like protein At3g54510

6.2e-17

55.56

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL
        SLLASAA+NIGLAF VLSIF ILKKQP   AIYYARRL LG  +SFEPFTFRR LPSV WIPR  + S           +  SSG +      R F+L++
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAIS-----RHFRLAL

Query:  GFISFCGI
         F   C +
Subjt:  GFISFCGI

SwissProt top hits

e value

%identity

Alignment

F4IBD7 CSC1-like protein RXW8

3.6e-06

39.71

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYS
        +LL SA INI +   +LS++ IL+KQPA   +Y+ RRL  G    ++PF + R +PS +W+ +  + S
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYS

F4JCY2 CSC1-like protein At3g54510

4.3e-07

51.39

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Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFR------RLLPSVAWIPRKMK
        SLLASA+INIGLA   L +F +LKKQP    +YYARR  L  R    P +        R LPSVAWIPR  +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFR------RLLPSVAWIPRKMK

Arabidopsis top hits

e value

%identity

Alignment

AT1G10090.1 Early-responsive to dehydration stress protein (ERD4)

7.7e-04

37.7

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Query:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWI
        +LL SA INI +   ++S++ IL+KQPA   +Y+ R L  G     +P  + R  PS +W+
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWI

AT1G58520.1 lipases;hydrolases, acting on ester bonds

2.6e-07

39.71

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYS
        +LL SA INI +   +LS++ IL+KQPA   +Y+ RRL  G    ++PF + R +PS +W+ +  + S
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQPA---IYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYS

AT3G54510.2 Early-responsive to dehydration stress protein (ERD4)

3.0e-08

51.39

Show/hide

Query:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFR------RLLPSVAWIPRKMK
        SLLASA+INIGLA   L +F +LKKQP    +YYARR  L  R    P +        R LPSVAWIPR  +
Subjt:  SLLASAAINIGLAFTVLSIFYILKKQP---AIYYARRLFLGHRVSFEPFTFR------RLLPSVAWIPRKMK

Sequences

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CDS sequence

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AGTTTGTTGGCTTCAGCGGCCATTAACATTGGCTTGGCCTTCACAGTCCTCTCAATCTTCTACATCCTCAAGAAGCAGCCCGCCATTTATTACGCTCGCCGGCTCTTCCT
CGGCCACCGCGTGTCATTTGAACCTTTCACTTTCCGTCGACTTCTCCCTTCCGTCGCCTGGATTCCTCGGAAGATGAAATACTCTCTTCCGCTGGCCTTGATGCCCTCGT
TACCATCAGACTCTTCAAGCTCAGGTGCAATTTCTCGGCATTTTCGCTTGGCTCTGGGCTTCATTTCGTTTTGTGGAATCTACCTCTTGCGCATAAGCACTGTAAGAGTC
GATTTCTTCCTACATTTCACTGCTAACCTAGACAGTTGGGTTAATTGCTTTGATCAGGAGGCTATGGAGAATGATGAACTTGATGAAAAGAGCAATGAATTGGAAGTTAT
GAAAAGGCAGCCGATGCTTATTGCCTGCCCTGCCTGCAACCTCCGGACTTCTTACTGGCATCAGTGTCAACCTCCACACAGCCATTGGTAA

mRNA sequence

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Protein sequence

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SLLASAAINIGLAFTVLSIFYILKKQPAIYYARRLFLGHRVSFEPFTFRRLLPSVAWIPRKMKYSLPLALMPSLPSDSSSSGAISRHFRLALGFISFCGIYLLRISTVRV
DFFLHFTANLDSWVNCFDQEAMENDELDEKSNELEVMKRQPMLIACPACNLRTSYWHQCQPPHSHW

Spg009893 (gene) of Sponge gourd (cylindrica) v1 genome