CuGenDBv2

Gene ID	Spg009899
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	scaffold7:6219360..6221662
RNA-Seq Expression	Spg009899
Synteny	Spg009899
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

6.1e-85

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF+TLRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

5.2e-84

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEVKSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

1.8e-84

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEVKSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

8.0e-85

97.62

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_038893313.1 ATP synthase subunit d, mitochondrial [Benincasa hispida]

3.4e-83

96.43

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGT+KKV +VAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIVEVQEMKKKISTMTADEYF KHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

4.7e-83

95.24

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

3.0e-85

97.02

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF+TLRRAF+EVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

2.5e-84

96.43

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEVKSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1GY12 ATP synthase subunit d, mitochondrial

1.4e-82

95.24

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVAD  FKASKNIDWDGMAKLLVSDEARKEFS LRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIG RLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

8.6e-85

97.02

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Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEVKSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

1.2e-75

83.33

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

8.5e-77

83.33

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

4.1e-47

79.63

Show/hide

Query:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGCACCGTTAAGAAAGTCGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCAAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTT
CTCCACCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACCAAGTTTAGCCAGGAACCAGAACCCATAGATTGGGAATATTACAGAAAGGGAATTGGATCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGATCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGCTAGTAGAATTG
AAGGAAGCTGAAGTGAAATCCCTAAAGGAGTCTGAGCGGTTGGAAAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTT
CGAGAAGCATCCTGAGCTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGA

mRNA sequence

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Protein sequence

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MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSTLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVEL
KEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Spg009899 (gene) of Sponge gourd (cylindrica) v1 genome