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Spg009908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontetratricopeptide repeat protein 5-like
Genome locationscaffold7:4623097..4623719
RNA-Seq ExpressionSpg009908
SyntenySpg009908
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034605.1 tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo var. makuwa]1.7e-1789.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
TYK09157.1 tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo var. makuwa]1.7e-1789.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
XP_008446682.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X1 [Cucumis melo]1.7e-1789.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
XP_008446683.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X2 [Cucumis melo]1.7e-1789.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
XP_008446684.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo]1.7e-1789.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
TrEMBL top hitse value%identityAlignment
A0A1S3BF62 tetratricopeptide repeat protein 5-like isoform X28.2e-1889.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
A0A1S3BFP3 tetratricopeptide repeat protein 5-like isoform X38.2e-1889.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
A0A1S3BGG9 tetratricopeptide repeat protein 5-like isoform X18.2e-1889.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
A0A5A7SZG5 Tetratricopeptide repeat protein 5-like isoform X38.2e-1889.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
A0A5D3CAY6 Tetratricopeptide repeat protein 5-like isoform X38.2e-1889.09Show/hide
Query:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
        M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPP
Subjt:  MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCGAAGCCAAGGAACACACGTTCGACGAAGCCACAGCGGCCGCCGAAGAGCTATATCTCATCAGAGACACTTTTTTTCCTGTAAATCCCGATGACAAAACTTC
CAAATTGCAAGAGCTCTCGGATCTTGCTGTCAAGATCCTCGATTCTATTCCTCCAGGTCGATTCTGCTTTCATTTTTCTTTGAACTTGCCTATTGCAATAAGCTACTATT
CGACCTGGGATTTTGGCTTCCTTGTCAATGGTAAATTTGTAATGGATGGAGACAATAATGTGCCTGCAACAAAGGGAACTGAGCACCGGTGCGATGATAAGCCACACACT
CCAATGCTCAAGTTAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCGAAGCCAAGGAACACACGTTCGACGAAGCCACAGCGGCCGCCGAAGAGCTATATCTCATCAGAGACACTTTTTTTCCTGTAAATCCCGATGACAAAACTTC
CAAATTGCAAGAGCTCTCGGATCTTGCTGTCAAGATCCTCGATTCTATTCCTCCAGGTCGATTCTGCTTTCATTTTTCTTTGAACTTGCCTATTGCAATAAGCTACTATT
CGACCTGGGATTTTGGCTTCCTTGTCAATGGTAAATTTGTAATGGATGGAGACAATAATGTGCCTGCAACAAAGGGAACTGAGCACCGGTGCGATGATAAGCCACACACT
CCAATGCTCAAGTTAGAATAG
Protein sequenceShow/hide protein sequence
MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPGRFCFHFSLNLPIAISYYSTWDFGFLVNGKFVMDGDNNVPATKGTEHRCDDKPHT
PMLKLE