; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg009996 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg009996
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:9701613..9709134
RNA-Seq ExpressionSpg009996
SyntenySpg009996
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO62153.1 reverse transcriptase [Corchorus capsularis]8.0e-2725.31Show/hide
Query:  GELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLP
        G + ++   S + D+  +W  D + +LF+  D   IL++P   + SRDE+IW   K G + V+  YH+A  I  LG  S     +  K W+ LW + VLP
Subjt:  GELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLP

Query:  RIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMG--------
        ++K   W+++  I+P K    +KGI+++  C       +S  H+ + C  S+++W++  P   N  +    NW  +D  SW    +  +++G        
Subjt:  RIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMG--------

Query:  ------------------------IKGS--IKEWGNSYLK--NLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQ
                                IK +  + E   S  +  N G  +   H     W     + +K+N+DA +  SR   GLG V+ DS   +      
Subjt:  ------------------------IKGS--IKEWGNSYLK--NLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQ

Query:  IVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLDF
         ++   D+   E   +  G+   +   L   V  EVE D+      ++  E  L +    VD I  ++S+     F + NR+AN   H LA   C + F
Subjt:  IVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLDF

XP_023876230.1 uncharacterized protein LOC111988681 [Quercus suber]1.2e-2728.31Show/hide
Query:  VLDENN-RWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKE-WKCLWNSRVLPRIKICAWKI
        ++D N  +WKE  I Q FLPQD E IL++       RD +IW  +K G F V+STY LA +I S   +++S    A K+ W+ LWN  V  +IK  AWK 
Subjt:  VLDENN-RWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKE-WKCLWNSRVLPRIKICAWKI

Query:  INNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES---FIPTSLN-LFSFCRVNWSPKDY---------------WS-WMTENL---
          NI+  K N  K+ I  +  C    K  EST HL W C   K++W S    IP  +  ++ F  V W  + +               W  W   N    
Subjt:  INNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES---FIPTSLN-LFSFCRVNWSPKDY---------------WS-WMTENL---

Query:  ---NKEDMGI-KGSIKEWGNSYLKNLGPKRL-RSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKI----LES
            ++D  I + S++   +   +N  P  L +       W   +P  +K+N D A F      G+G ++HDS   +I      ++RK  + +    +E+
Subjt:  ---NKEDMGI-KGSIKEWGNSYLKNLGPKRL-RSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKI----LES

Query:  KLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLD
        K + VG++      ++    + +E D+L +  VL G  E  + ++  +      +   R + F H  R  N   H LA+   +++
Subjt:  KLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLD

XP_024157591.1 uncharacterized protein LOC112165325 [Rosa chinensis]4.0e-2626.84Show/hide
Query:  LGELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLA--MEIKSLGDVSQSDQSKAAKEWKCLWNSR
        L  L   +K   +  E   W    I   FL  + E IL MP G+ +  D+++WH  K G + VKS Y +A  M ++  GD + S  ++  K W+ +W   
Subjt:  LGELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLA--MEIKSLGDVSQSDQSKAAKEWKCLWNSR

Query:  VLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESF----------IPTSLNLF-------------SFCRVNWS
           +IK+  W+ +   +PC AN  +K +  + RC       ES  H +W+C  +K+ W+            +PT L+L              +FC   W 
Subjt:  VLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESF----------IPTSLNLF-------------SFCRVNWS

Query:  PKDYWSWMTENL------NKEDMGIKGSIKEWGNSYLKNLGPKRLRS-----HASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSL--ICF
            W W   NL      N + + +     EW N +  NLG  + +S     HA H  WK  +    K+N D A     G  GLG V  D+  +L     
Subjt:  PKDYWSWMTENL------NKEDMGIKGSIKEWGNSYLKNLGPKRLRS-----HASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSL--ICF

Query:  EVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR
          QI N     + +E+  +L G++            +E+E D L+V   L    ED S     +D +  L       +     R  N + HRLA+
Subjt:  EVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR

XP_024164210.1 uncharacterized protein LOC112171231 [Rosa chinensis]3.6e-2726.84Show/hide
Query:  LGELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLA--MEIKSLGDVSQSDQSKAAKEWKCLWNSR
        L  L   +K   +  E   W    I  +FL  + E IL MP G+ +  D+++WH  K G + VKS Y +A  M ++  GD++ S  ++  K W+ +W   
Subjt:  LGELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLA--MEIKSLGDVSQSDQSKAAKEWKCLWNSR

Query:  VLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESF----------IPTSLNLF-------------SFCRVNWS
           ++K+  W+ +   +PC AN  +K +  + RC       ES  H +W+C  +K+ W+            +PT L+L              +FC   W 
Subjt:  VLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESF----------IPTSLNLF-------------SFCRVNWS

Query:  PKDYWSWMTENL------NKEDMGIKGSIKEWGNSYLKNLGPKRLRS-----HASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSL--ICF
            W W   NL      N + + +     EW N +  NLG  + +S     HA    WK  +    K+N D A  +  G  GLG V  D+  +L     
Subjt:  PKDYWSWMTENL------NKEDMGIKGSIKEWGNSYLKNLGPKRLRS-----HASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSL--ICF

Query:  EVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR
          QI N     + +E+  +L G++        R   +EVE D L+V   L    ED S     +D +  L       +     R  N + HRLA+
Subjt:  EVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR

XP_030970589.1 uncharacterized protein LOC115990964 [Quercus lobata]8.8e-2624.35Show/hide
Query:  VNNSRDLGELIKNYKHSKVLDENNR-WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKC
        +  S+ +GE  +N+    ++D  +R W E+ +  LF  +D E I  +P    ++ D + W     G +  KS Y    E       +Q+      K WK 
Subjt:  VNNSRDLGELIKNYKHSKVLDENNR-WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKC

Query:  LWNSRVLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWS-PKDYWSWMTENLNKEDM
        +W  ++ P+I+   W+   N++P K   +K+ I   P C  Y   +E   H +W C     +W   +P S  L     V +S  K+  SWM E     ++
Subjt:  LWNSRVLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWS-PKDYWSWMTENLNKEDM

Query:  GIKGSIKEWGNSYLKNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTC
            + + W       LG   ++       W   +     +N D + F +  + G+G V+ + N +++    + +N+ +  + +E+   L  +KA+Q   
Subjt:  GIKGSIKEWGNSYLKNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTC

Query:  LQRKVGLE---VEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR-TVCSLDFGAGQEN
        L   +G +   +E D+L + K L   + +LS L   V+ +   +S    +++ H  R  NS+ H LA+ T+  LDF    E+
Subjt:  LQRKVGLE---VEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR-TVCSLDFGAGQEN

TrEMBL top hitse value%identityAlignment
A0A2N9F647 Uncharacterized protein5.6e-2623.5Show/hide
Query:  WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNIIPCKA
        W    + ++FLP+D E I  +P  +   RD +IW   KKGIF VKS Y++ +   S G+   S   + +  WK LW+++V P++K+ AW+   NI+P K 
Subjt:  WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNIIPCKA

Query:  NNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES----------------------FIPTSLNLFSFCRVN----WSPKDYWSWMTENLNKEDMG
           +KG+     CS+ +++ E+T H++W C+ ++++W++                      F      L   C       W  ++   W  +  N  D+ 
Subjt:  NNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES----------------------FIPTSLNLFSFCRVN----WSPKDYWSWMTENLNKEDMG

Query:  IKGSIKEWGNSYLKNLGPKRLRSHA----SHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQ
        ++ +  E   ++L+    + L  HA        W     + +KLN    W  ++   G+G ++ +    ++      ++   +I  + +KL+L  +K  +
Subjt:  IKGSIKEWGNSYLKNLGPKRLRSHA----SHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQ

Query:  QTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNF----VHCNRLANSL
           L R   + +E     +  +L      L      VD I  L+   + ++F     +CNR A +L
Subjt:  QTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNF----VHCNRLANSL

A0A2N9FFZ2 Reverse transcriptase domain-containing protein9.5e-2623.68Show/hide
Query:  ENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNII
        E   WK + + ++FLP +   IL +P  I    D ++W   K G + V+S YHL +      + S SD +K  + W  +W+  V P+I+   W+  +N +
Subjt:  ENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNII

Query:  PCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMGIKGSIKEWGNSYLKNLGPKRLR
        P ++N   + I  +P CS    ++EST H +W+CK  K +W+S IP    L       +          +NL++       ++ E+  +   +  P    
Subjt:  PCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMGIKGSIKEWGNSYLKNLGPKRLR

Query:  SHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGK
        +H     WK  +   +K+N D A F  R   G+G ++ +    ++      +     ++ +E+      I+  +         +++E D+  + + L  K
Subjt:  SHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGK

Query:  EEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR
            +     ++ I   +  L+ V+F+H NR  N++ H LA+
Subjt:  EEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLAR

A0A2N9FYH3 CCHC-type domain-containing protein1.2e-2523.22Show/hide
Query:  WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNIIPCKA
        W    + ++FLP+D E I  +P  +   RD +IW   KKGIF VKS Y++ +   S G+   S   + +  WK LW+++V P++K+ AW+   NI+P K 
Subjt:  WKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNIIPCKA

Query:  NNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES----------------------FIPTSLNLFSFCRVN----WSPKDYWSWMTENLNKEDMG
           +KG+     CS+ +++ E+  H++W C+ ++++W++                      F      L   C       W  ++   W  +  N  D+ 
Subjt:  NNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWES----------------------FIPTSLNLFSFCRVN----WSPKDYWSWMTENLNKEDMG

Query:  IKGSIKEWGNSYLKNLGPKRLRSHA----SHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQ
        ++ +  E   ++L+    + L  HA        W     + +KLN    W  ++   G+G ++ +    ++      ++   +I  + +KL+L  +K  +
Subjt:  IKGSIKEWGNSYLKNLGPKRLRSHA----SHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQ

Query:  QTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNF----VHCNRLANSL
           L R   + +E     +  +L      L      VD I  L+   + ++F     +CNR A +L
Subjt:  QTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNF----VHCNRLANSL

A0A803NTN0 Uncharacterized protein2.2e-3027.45Show/hide
Query:  SKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKI
        S  + +   W  D +   F P D E IL +P    + +D +IWH    GI+ VKS +HLA  ++   D S SD ++    WK  WN  + P+I+I AWK+
Subjt:  SKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKI

Query:  INNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWE----SFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMGIKGSIKEWGNSYL
        +NN++P  A   KK I  +  CS      ES  H ++ CK ++ +W+    S   T     +  R+N S   + + + ++ ++     K S    G+   
Subjt:  INNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWE----SFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMGIKGSIKEWGNSYL

Query:  KNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTL
         +  P          PW     + +KLN DAA        G+G V+ D N  +I    ++    +    +E+K +   +    Q+ L       +E D L
Subjt:  KNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTL

Query:  AVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLD
         V+  L+    DLS     +  +  L S    V   H  R AN   H LA+    LD
Subjt:  AVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLD

M5XSK0 Reverse transcriptase domain-containing protein1.1e-2924.38Show/hide
Query:  ENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEI-KSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNI
        ++  W    +  +F P++   I ++P  +  + D ++WH DKKG+F VKS YH+A  +  S G  S S+    A+ W  LW + V  R+K   W++I+ I
Subjt:  ENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEI-KSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICAWKIINNI

Query:  IPCKANNLKKGIDLNPRCSFYLKKLESTTHLI--------------WECKISKQMWESFIPTSLNLFSFCRVNWS---PKDYWSWMTENLNKEDMGIKGS
        +P KAN  +K + L+  C      ++S  H++              W C+ ++Q+      +S +  +F  V W+    ++   W  +    E + +  S
Subjt:  IPCKANNLKKGIDLNPRCSFYLKKLESTTHLI--------------WECKISKQMWESFIPTSLNLFSFCRVNWS---PKDYWSWMTENLNKEDMGIKGS

Query:  IKEWGNSYLKNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKV
        ++      + N    + R       W+    +S K+N D AW      GG+G VV DS    +      +   +    +E+      + A   T L  + 
Subjt:  IKEWGNSYLKNLGPKRLRSHASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKV

Query:  GLE---VEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLDFGAGQENPHMRESGQIFWSPDLPLWFSPPFF
        G +    E D L +   L     D S + P V+   SL + +    F H  R AN + HRLAR    +              G ++W  + P + S   +
Subjt:  GLE---VEFDTLAVTKVLDGKEEDLSDLKPFVDSIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLDFGAGQENPHMRESGQIFWSPDLPLWFSPPFF

Query:  EN
        E+
Subjt:  EN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0529.51Show/hide
Query:  LWNSRVLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQ
        +W+ ++ P+IK+  WK +NN +P  A  L + I + P C+   +  E+ TH+++ C  +++
Subjt:  LWNSRVLPRIKICAWKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGATCTCTCCTCCAAAAATCTGCTCTCAATCGAGTTCTCTCAAGAATTGGTGTGTTAAGCGTCGAGACGCTGAAGGATAGTGTCTCAACACTTCCCTTTCTGGA
CTCCAAGCTGCACTGTGGCAGCAGTGGCCTGCACGCCGAGTCAATTAGCCTGCCATTTTGGGGACAAGGCCGAGTGGGGAGCTGGGAACATAGTCACACAAGATGGAATT
CACTCCTTCCCGACTCTAGGATAAGTAGAGGTCCATTAGGTTCCACCGGTAGCTCACTATGGGCGTTGAGCAAAAAGGAAAAGACTTTGCTGCTGGTTTTGGTGAACAAT
TCAAGGGATCTTGGCGAATTGATCAAGAACTACAAGCATAGTAAGGTCCTCGATGAGAATAACAGATGGAAAGAGGATCGAATAATCCAACTCTTCCTCCCTCAAGATAC
AGAAGATATACTAAATATGCCAGCTGGAATCGAGAGCTCTAGGGATGAAATAATATGGCACCTAGATAAGAAAGGAATCTTCAAGGTCAAAAGTACCTACCACCTAGCTA
TGGAGATCAAATCCTTAGGGGATGTATCTCAATCTGATCAAAGCAAAGCTGCTAAGGAGTGGAAATGCCTCTGGAACTCAAGGGTGCTACCAAGGATCAAAATCTGTGCT
TGGAAGATCATTAACAACATTATCCCGTGCAAGGCCAACAACCTAAAGAAAGGGATTGATCTTAACCCTCGTTGCTCTTTCTATTTGAAAAAGCTTGAATCTACCACTCA
CCTTATTTGGGAGTGTAAGATCTCTAAGCAAATGTGGGAATCTTTTATCCCTACATCCCTTAATCTATTCTCATTTTGTAGGGTAAATTGGAGTCCTAAGGACTACTGGA
GCTGGATGACAGAAAACCTCAACAAAGAAGATATGGGCATCAAAGGAAGCATCAAAGAATGGGGAAATTCTTACCTTAAGAATCTTGGTCCGAAAAGGCTAAGGAGTCAC
GCGAGTCATGCCCCTTGGAAGAAATCGAAGCCAAGCTCTTGGAAATTAAACTCAGACGCTGCCTGGTTCGACAGCAGAGGCGCCGGAGGGCTTGGATGGGTGGTGCACGA
CTCAAATAGGTCCTTAATCTGTTTCGAAGTTCAAATAGTCAATCGAAAGTGGGATATCAAAATTTTGGAGTCAAAATTGATTTTGGTTGGAATTAAAGCTATTCAACAAA
CCTGTCTCCAAAGGAAAGTCGGGCTGGAAGTCGAATTTGACACCCTTGCTGTGACAAAGGTCTTGGATGGAAAAGAAGAAGACCTGTCGGACCTCAAGCCTTTTGTTGAT
TCAATCGCGTCCCTCTCCTCTGTTCTACGGGAGGTTAATTTTGTTCATTGTAATCGTCTTGCCAATTCGTTAACCCACCGGTTGGCAAGAACGGTGTGTTCTTTGGATTT
TGGCGCGGGTCAGGAGAATCCCCATATGAGGGAATCTGGGCAAATTTTTTGGTCTCCTGACCTCCCTCTATGGTTTTCCCCTCCTTTTTTTGAGAATAGTTGTAACGGTG
GTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGATCTCTCCTCCAAAAATCTGCTCTCAATCGAGTTCTCTCAAGAATTGGTGTGTTAAGCGTCGAGACGCTGAAGGATAGTGTCTCAACACTTCCCTTTCTGGA
CTCCAAGCTGCACTGTGGCAGCAGTGGCCTGCACGCCGAGTCAATTAGCCTGCCATTTTGGGGACAAGGCCGAGTGGGGAGCTGGGAACATAGTCACACAAGATGGAATT
CACTCCTTCCCGACTCTAGGATAAGTAGAGGTCCATTAGGTTCCACCGGTAGCTCACTATGGGCGTTGAGCAAAAAGGAAAAGACTTTGCTGCTGGTTTTGGTGAACAAT
TCAAGGGATCTTGGCGAATTGATCAAGAACTACAAGCATAGTAAGGTCCTCGATGAGAATAACAGATGGAAAGAGGATCGAATAATCCAACTCTTCCTCCCTCAAGATAC
AGAAGATATACTAAATATGCCAGCTGGAATCGAGAGCTCTAGGGATGAAATAATATGGCACCTAGATAAGAAAGGAATCTTCAAGGTCAAAAGTACCTACCACCTAGCTA
TGGAGATCAAATCCTTAGGGGATGTATCTCAATCTGATCAAAGCAAAGCTGCTAAGGAGTGGAAATGCCTCTGGAACTCAAGGGTGCTACCAAGGATCAAAATCTGTGCT
TGGAAGATCATTAACAACATTATCCCGTGCAAGGCCAACAACCTAAAGAAAGGGATTGATCTTAACCCTCGTTGCTCTTTCTATTTGAAAAAGCTTGAATCTACCACTCA
CCTTATTTGGGAGTGTAAGATCTCTAAGCAAATGTGGGAATCTTTTATCCCTACATCCCTTAATCTATTCTCATTTTGTAGGGTAAATTGGAGTCCTAAGGACTACTGGA
GCTGGATGACAGAAAACCTCAACAAAGAAGATATGGGCATCAAAGGAAGCATCAAAGAATGGGGAAATTCTTACCTTAAGAATCTTGGTCCGAAAAGGCTAAGGAGTCAC
GCGAGTCATGCCCCTTGGAAGAAATCGAAGCCAAGCTCTTGGAAATTAAACTCAGACGCTGCCTGGTTCGACAGCAGAGGCGCCGGAGGGCTTGGATGGGTGGTGCACGA
CTCAAATAGGTCCTTAATCTGTTTCGAAGTTCAAATAGTCAATCGAAAGTGGGATATCAAAATTTTGGAGTCAAAATTGATTTTGGTTGGAATTAAAGCTATTCAACAAA
CCTGTCTCCAAAGGAAAGTCGGGCTGGAAGTCGAATTTGACACCCTTGCTGTGACAAAGGTCTTGGATGGAAAAGAAGAAGACCTGTCGGACCTCAAGCCTTTTGTTGAT
TCAATCGCGTCCCTCTCCTCTGTTCTACGGGAGGTTAATTTTGTTCATTGTAATCGTCTTGCCAATTCGTTAACCCACCGGTTGGCAAGAACGGTGTGTTCTTTGGATTT
TGGCGCGGGTCAGGAGAATCCCCATATGAGGGAATCTGGGCAAATTTTTTGGTCTCCTGACCTCCCTCTATGGTTTTCCCCTCCTTTTTTTGAGAATAGTTGTAACGGTG
GTTAA
Protein sequenceShow/hide protein sequence
MPRSLLQKSALNRVLSRIGVLSVETLKDSVSTLPFLDSKLHCGSSGLHAESISLPFWGQGRVGSWEHSHTRWNSLLPDSRISRGPLGSTGSSLWALSKKEKTLLLVLVNN
SRDLGELIKNYKHSKVLDENNRWKEDRIIQLFLPQDTEDILNMPAGIESSRDEIIWHLDKKGIFKVKSTYHLAMEIKSLGDVSQSDQSKAAKEWKCLWNSRVLPRIKICA
WKIINNIIPCKANNLKKGIDLNPRCSFYLKKLESTTHLIWECKISKQMWESFIPTSLNLFSFCRVNWSPKDYWSWMTENLNKEDMGIKGSIKEWGNSYLKNLGPKRLRSH
ASHAPWKKSKPSSWKLNSDAAWFDSRGAGGLGWVVHDSNRSLICFEVQIVNRKWDIKILESKLILVGIKAIQQTCLQRKVGLEVEFDTLAVTKVLDGKEEDLSDLKPFVD
SIASLSSVLREVNFVHCNRLANSLTHRLARTVCSLDFGAGQENPHMRESGQIFWSPDLPLWFSPPFFENSCNGG