; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010020 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010020
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold7:4886976..4887861
RNA-Seq ExpressionSpg010020
SyntenySpg010020
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3959379.1 hypothetical protein CMV_015807 [Castanea mollissima]4.9e-1736.67Show/hide
Query:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES
        T++ D F +    S+GI    + + A +Y C  R+H+A+D        ++  S  I  G  ++T+  +P++ +S A   K D     C+ICL D++E ++
Subjt:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES

Query:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA
          LRLLP CGHVFH  C+D WLR   +CP+CRN    T  P   PLA +A
Subjt:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA

XP_009389703.1 PREDICTED: RING-H2 finger protein ATL70-like [Musa acuminata subsp. malaccensis]6.4e-1737.14Show/hide
Query:  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHC
        F + +S+G+  LV+ IALA++   R +A + R     R    A  ++ +G  + T+ ++P++ F+ AK   +GG    C+ICL+++ + +   LR+LP C
Subjt:  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHC

Query:  GHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI
        GH+FH+ C+D WLR + +CP+CR   LP+PSP   PLA +
Subjt:  GHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI

XP_015866803.1 RING-H2 finger protein ATL70-like [Ziziphus jujuba]1.7e-1735.76Show/hide
Query:  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISSGCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRE
        + + I +S+GI  ++++   L++ CNRR  A           SN  +        + I++G  D T+  FP++ ++ AK   D       C++CL D+++
Subjt:  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISSGCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRE

Query:  RESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAA
        ++   LRLLP CGH+FH+ C+D WLR   +CPICRN  LPTP     PLAA
Subjt:  RESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAA

XP_023875017.1 RING-H2 finger protein ATL70-like [Quercus suber]3.4e-1838Show/hide
Query:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES
        T++ D F +    S+GI    +V+ A +Y+C  R+H+A+D        ++  S  I  G  ++T+  +P++ +S A   K D     C+ICL D++E ++
Subjt:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES

Query:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA
          LRLLP CGHVFH  C+D WLR   +CPICRN    T  P + PLA +A
Subjt:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA

XP_030961994.1 RING-H2 finger protein ATL70-like [Quercus lobata]4.0e-1939.33Show/hide
Query:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES
        TE+ D F +    SIGI    +V+ A +Y+C  R+H+A+D        ++  S  I  G  ++T++ +P++ +S A   K D     C+ICLTD++E ++
Subjt:  TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERES

Query:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA
          LRLLP CGHVFH  C+D WLR   +CP+CRN    T  P   PLA +A
Subjt:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA

TrEMBL top hitse value%identityAlignment
A0A2P5DAD8 43kDa postsynaptic protein4.0e-1737.71Show/hide
Query:  LFCIQISI-GIFFLVLIALAYHCNRRIHAAA---------DRGGVG-----DRGSNRASDEISSGCVDTTVSKFPEMQFSLAK----------SDGDGGG
        L  I+IS+ G+  L+ +A+ Y+ N R    A           GGVG     D+ S  ++  I  G  + T+  FP+  F+ AK            GDG G
Subjt:  LFCIQISI-GIFFLVLIALAYHCNRRIHAAA---------DRGGVG-----DRGSNRASDEISSGCVDTTVSKFPEMQFSLAK----------SDGDGGG

Query:  -------CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPT------PSPYTNPLAAI
               C+ICL DF E +   LRLLP CGHVFHV C+D WLR + +CP CR   LPT      P+P T PLA +
Subjt:  -------CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPT------PSPYTNPLAAI

A0A2P5DAE1 43kDa postsynaptic protein5.3e-1736.67Show/hide
Query:  FLFCIQISIGIFFLVLIALAYHC----NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAK------SDG-DGGGCAICLTDFRERES
        F + I +S+G+  L++    + C      R+    +R       +  +  +   G  D  +  FP++ +  AK      SDG D   C+ICL D+ + + 
Subjt:  FLFCIQISIGIFFLVLIALAYHC----NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAK------SDG-DGGGCAICLTDFRERES

Query:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA
          LRLLP CGHVFH+TC+D WLR+  +CPICRN  +PTPS  T PLA +A
Subjt:  LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA

A0A6P3YT74 RING-H2 finger protein ATL70-like8.1e-1835.76Show/hide
Query:  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISSGCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRE
        + + I +S+GI  ++++   L++ CNRR  A           SN  +        + I++G  D T+  FP++ ++ AK   D       C++CL D+++
Subjt:  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISSGCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRE

Query:  RESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAA
        ++   LRLLP CGH+FH+ C+D WLR   +CPICRN  LPTP     PLAA
Subjt:  RESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAA

A0A7N2LGY2 RING-type domain-containing protein6.2e-1839.04Show/hide
Query:  DIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLR
        D F +    SIGI    +V+ A +Y+C  R+H+A+D        ++  S  I  G  ++T++ +P++ +S A   K D     C+ICLTD++E ++  LR
Subjt:  DIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLR

Query:  LLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA
        LLP CGHVFH  C+D WLR   +CP+CRN    T  P   PLA +A
Subjt:  LLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIA

M0S8T0 RING-type domain-containing protein3.1e-1737.14Show/hide
Query:  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHC
        F + +S+G+  LV+ IALA++   R +A + R     R    A  ++ +G  + T+ ++P++ F+ AK   +GG    C+ICL+++ + +   LR+LP C
Subjt:  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHC

Query:  GHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI
        GH+FH+ C+D WLR + +CP+CR   LP+PSP   PLA +
Subjt:  GHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI

SwissProt top hitse value%identityAlignment
O82353 RING-H2 finger protein ATL673.9e-1732.93Show/hide
Query:  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGSNRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG-
        F   I+I + FLVL++     +Y C R        + +  DRGG            +   +  + ++  G     ++ +P+  F    S A SDG GGG 
Subjt:  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGSNRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG-

Query:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI
           C+ICL +++E E   LR++P C H FH+ C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Subjt:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI

Q5XF85 E3 ubiquitin-protein ligase ATL422.4e-1440.4Show/hide
Query:  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN
        +RR H    R G+    S  +SD   SG   T +   P  +FS  K    G  C++CL+ F   E   LRLLP C H FH+ CIDQWL +  +CP+CR+
Subjt:  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN

Q8RX29 RING-H2 finger protein ATL704.3e-1632.45Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRER
        T+D   F + I +SIG+  L+  +   +Y+C R   +++      D        +    ++  G  + T+  +P++ +S AK       CAICL D++ +
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRER

Query:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI
            LR LP C H+FH+ CID WLR   +CP+CR   LPT  P + PLA +
Subjt:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI

Q9LZJ6 RING-H2 finger protein ATL56.9e-1434.93Show/hide
Query:  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV-SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPH
        +F  V++ L +H          NRRI    +A  R     R   ++S  +S   +D TV  K P   +S+   +     C++CL++F E +    R+LP 
Subjt:  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV-SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPH

Query:  CGHVFHVTCIDQWLRRQTSCPICRNPALPT-PSPYTNPLAAIALSI
        CGHVFHV CID W R ++SCP+CR P  P  P     P+AA+  S+
Subjt:  CGHVFHVTCIDQWLRRQTSCPICRNPALPT-PSPYTNPLAAIALSI

Q9M313 RING-H2 finger protein ATL682.4e-1433.53Show/hide
Query:  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDEISSGCV------DTTVSKFPEMQF-----SLAKSDG--DG
        I+I + FLVLI+     +Y C R    R  A+A         S+R             D++ SG V       + ++ +P+  F     ++   DG  DG
Subjt:  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDEISSGCV------DTTVSKFPEMQF-----SLAKSDG--DG

Query:  GG----CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI
         G    C+ICL ++ E E   LR++P C H FHV C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Subjt:  GG----CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI

Arabidopsis top hitse value%identityAlignment
AT2G35910.1 RING/U-box superfamily protein3.1e-1732.45Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRER
        T+D   F + I +SIG+  L+  +   +Y+C R   +++      D        +    ++  G  + T+  +P++ +S AK       CAICL D++ +
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRER

Query:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI
            LR LP C H+FH+ CID WLR   +CP+CR   LPT  P + PLA +
Subjt:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAI

AT2G46160.1 RING/U-box superfamily protein2.8e-1832.93Show/hide
Query:  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGSNRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG-
        F   I+I + FLVL++     +Y C R        + +  DRGG            +   +  + ++  G     ++ +P+  F    S A SDG GGG 
Subjt:  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGSNRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG-

Query:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI
           C+ICL +++E E   LR++P C H FH+ C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Subjt:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI

AT3G61550.1 RING/U-box superfamily protein1.7e-1533.53Show/hide
Query:  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDEISSGCV------DTTVSKFPEMQF-----SLAKSDG--DG
        I+I + FLVLI+     +Y C R    R  A+A         S+R             D++ SG V       + ++ +P+  F     ++   DG  DG
Subjt:  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDEISSGCV------DTTVSKFPEMQF-----SLAKSDG--DG

Query:  GG----CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI
         G    C+ICL ++ E E   LR++P C H FHV C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Subjt:  GG----CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI

AT3G62690.1 AtL54.9e-1534.93Show/hide
Query:  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV-SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPH
        +F  V++ L +H          NRRI    +A  R     R   ++S  +S   +D TV  K P   +S+   +     C++CL++F E +    R+LP 
Subjt:  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV-SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPH

Query:  CGHVFHVTCIDQWLRRQTSCPICRNPALPT-PSPYTNPLAAIALSI
        CGHVFHV CID W R ++SCP+CR P  P  P     P+AA+  S+
Subjt:  CGHVFHVTCIDQWLRRQTSCPICRNPALPT-PSPYTNPLAAIALSI

AT4G28890.1 RING/U-box superfamily protein1.7e-1540.4Show/hide
Query:  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN
        +RR H    R G+    S  +SD   SG   T +   P  +FS  K    G  C++CL+ F   E   LRLLP C H FH+ CIDQWL +  +CP+CR+
Subjt:  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAATCGCCGCATCCA
CGCCGCCGCCGATCGCGGCGGCGTGGGCGACAGAGGCAGCAATCGGGCCTCCGACGAGATCAGTTCCGGCTGCGTGGATACTACTGTAAGCAAGTTCCCGGAGATGCAGT
TCTCGCTAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGGTTGCGGCTACTGCCGCATTGTGGACACGTG
TTCCATGTCACGTGCATAGATCAGTGGCTGCGGCGGCAAACCTCGTGCCCGATATGTAGAAATCCGGCTTTGCCGACGCCGAGCCCTTATACGAATCCTTTGGCCGCCAT
TGCTCTTTCCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAATCGCCGCATCCA
CGCCGCCGCCGATCGCGGCGGCGTGGGCGACAGAGGCAGCAATCGGGCCTCCGACGAGATCAGTTCCGGCTGCGTGGATACTACTGTAAGCAAGTTCCCGGAGATGCAGT
TCTCGCTAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGGTTGCGGCTACTGCCGCATTGTGGACACGTG
TTCCATGTCACGTGCATAGATCAGTGGCTGCGGCGGCAAACCTCGTGCCCGATATGTAGAAATCCGGCTTTGCCGACGCCGAGCCCTTATACGAATCCTTTGGCCGCCAT
TGCTCTTTCCATTTAG
Protein sequenceShow/hide protein sequence
MGFTEDSDIFLFCIQISIGIFFLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHV
FHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIALSI