; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010061 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010061
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionexosome complex component RRP41 homolog
Genome locationscaffold7:8151114..8154792
RNA-Seq ExpressionSpg010061
SyntenySpg010061
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0004527 - exonuclease activity (molecular function)
GO:0009022 - tRNA nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3964871.1 hypothetical protein CMV_010887 [Castanea mollissima]1.4e-12293.75Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG V+KADGSAVFEMGNTKVIAAVYGP+EVQNR+QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRD+VTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        LPIDIFENVMQLAIEGCKAIANYIRE+MLENTK+LEY RG
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

XP_022157614.1 exosome complex component RRP41 homolog [Momordica charantia]8.7e-12595.85Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLR DGRRPMEMRQIR EIG VSKADGSAVFEMGNTKVIAAVYGP+EVQNRSQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        LPIDIFENVMQLAIEGCKA+A+YIREVMLENTKKLEY RGA
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

XP_022941604.1 exosome complex component RRP41 homolog [Cucurbita moschata]1.9e-12796.68Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG VSKADGSA+FEMGNTKV+AAVYGP+EVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        LP+DIFENVMQLAIEGCKA+ANYIREVMLE+TKKLEYCRGA
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

XP_030944786.1 exosome complex component RRP41 homolog [Quercus lobata]1.4e-12293.75Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG V+KADGSAVFEMGNTKVIAAVYGP+EVQNR+QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRD+VTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        LPIDIFENVMQLAIEGCKAIANYIRE+MLENTK+LEY RG
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

XP_038891797.1 exosome complex component RRP41 homolog [Benincasa hispida]3.3e-12496.23Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG VSKA+GSAVFEMGNTKV+AAVYGP+EVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCR
        LPID+FENVMQLAIEGCKAIA+YIREVML+NTK+LEY R
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCR

TrEMBL top hitse value%identityAlignment
A0A5B6YT64 Putative exosome complex component RRP41 (Fragment)3.3e-12293.33Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        ME+VSPEGLRLDGRRPMEMRQIRAEIG V+KADGSAVFEMGNTKVIAAVYGP+EVQNRSQQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRD+VTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVG LPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        LP+DIFENVMQLAIEGCKA+ANYIREV+LENTK+LEY RG
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

A0A6J1DWZ5 exosome complex component RRP41 homolog4.2e-12595.85Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLR DGRRPMEMRQIR EIG VSKADGSAVFEMGNTKVIAAVYGP+EVQNRSQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        LPIDIFENVMQLAIEGCKA+A+YIREVMLENTKKLEY RGA
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

A0A6J1FNX1 exosome complex component RRP41 homolog9.0e-12896.68Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG VSKADGSA+FEMGNTKV+AAVYGP+EVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        LP+DIFENVMQLAIEGCKA+ANYIREVMLE+TKKLEYCRGA
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

A0A6J1JKC7 exosome complex component RRP41 homolog9.0e-12896.68Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG VSKADGSA+FEMGNTKV+AAVYGP+EVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        LP+DIFENVMQLAIEGCKA+ANYIREVMLE+TKKLEYCRGA
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

A0A7N2MX64 Uncharacterized protein6.7e-12393.75Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRAEIG V+KADGSAVFEMGNTKVIAAVYGP+EVQNR+QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRD+VTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        LPIDIFENVMQLAIEGCKAIANYIRE+MLENTK+LEY RG
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

SwissProt top hitse value%identityAlignment
Q5JIR6 Exosome complex component Rrp411.7e-5447.23Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        ++ +   G R+DGR+  E+R I+ E+G +  ADGSA  E G  KV+AAVYGP+E+  +  Q  ++A++R  Y MA FS  +R +KP  DRRS EIS VIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
          +E  +L H+ PR+ ID+F+++LQAD GTR A I AA+LALADAGIPM+D+V +C+AG ++   +LDLN  ED+ G  DV V  +P  + +TLLQMD  
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKL
        L  D F   ++LAI+G KA+    RE + E   K+
Subjt:  LPIDIFENVMQLAIEGCKAIANYIREVMLENTKKL

Q7YRA3 Exosome complex component RRP412.0e-6349.38Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A +G  ++ADGSA  E GNTK +A VYGP E++ +R++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        +L  D  E V++ A    + +   +  V+ ++ ++     G
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

Q921I9 Exosome complex component RRP418.9e-6449.38Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A +G  ++ADGSA  E GNTK +A VYGP E++ +RS+ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + +  LP   ++ LL+MD+
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        +L  D  E V++ A +  + +   +  V+ ++ ++     G
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

Q9NPD3 Exosome complex component RRP416.8e-6449.38Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A +G  ++ADGSA  E GNTK +A VYGP E++ +R++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG
        +L  D  E V++ A +  + +   +  V+ ++ ++     G
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRG

Q9SP08 Exosome complex component RRP41 homolog1.3e-10280.58Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI AE+G VSKADGSAVFEMGNTKVIAAVYGP+E+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        KLP++ FE V  LA EGCKAIA  IREV+ ENTK+LEY R A
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein8.6e-1429.26Show/hide
Query:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R DGR P ++R +      + +  GSA +  G+TKV+AAVYGPK    +++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein8.6e-1429.26Show/hide
Query:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R DGR P ++R +      + +  GSA +  G+TKV+AAVYGPK    +++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK

AT3G61620.1 3'-5'-exoribonuclease family protein9.0e-10480.58Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI AE+G VSKADGSAVFEMGNTKVIAAVYGP+E+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        KLP++ FE V  LA EGCKAIA  IREV+ ENTK+LEY R A
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

AT3G61620.2 3'-5'-exoribonuclease family protein9.0e-10480.58Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI AE+G VSKADGSAVFEMGNTKVIAAVYGP+E+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA
        KLP++ FE V  LA EGCKAIA  IREV+ ENTK+LEY R A
Subjt:  KLPIDIFENVMQLAIEGCKAIANYIREVMLENTKKLEYCRGA

AT4G27490.1 3'-5'-exoribonuclease family protein2.1e-2027.48Show/hide
Query:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT
        R DGR   + R    + G VS A GSA  E GNTKVI +V+GP+E   ++   S+   + C  +  NF++    +         E S ++ + +E  I+ 
Subjt:  RLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT

Query:  HLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENV
           P++ +D+F  VL++ G   S  I+ A+LALADAGI M D++T+ S   +  + ++D    E+        +  +P   ++T L +  +         
Subjt:  HLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENV

Query:  MQLAIEGCKAIANYIREVMLEN
        MQL ++    +   +R+ + ++
Subjt:  MQLAIEGCKAIANYIREVMLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCGTGAGCCCTGAAGGACTTCGCTTAGACGGTCGCCGTCCCATGGAGATGAGGCAAATTCGAGCAGAAATTGGCACCGTTTCTAAAGCAGATGGTTCTGCTGT
TTTTGAGATGGGTAACACCAAAGTTATTGCTGCTGTGTATGGTCCGAAAGAGGTTCAGAATAGGAGTCAACAAATGAGCAACCAAGCTCTGGTGCGCTGTGAATACACCA
TGGCTAATTTCAGTACTGGAGATCGCATGAGAAAACCCAAGGGTGACAGGCGATCCACAGAGATATCTTTAGTTATTCGTCAGACAATGGAGGAATGCATTCTAACACAT
TTAATGCCTCGGTCTCAGATAGATATTTTTGTCCAAGTTCTTCAAGCAGATGGAGGTACCAGATCAGCATGCATCAACGCTGCAACTTTGGCGCTTGCTGATGCTGGAAT
TCCCATGCGTGATATTGTTACTTCCTGCAGTGCTGGATACCTTAATAGCACTCCTCTGCTTGATTTGAATTATGTAGAGGATAGTGCTGGTGGCCCTGATGTCACCGTAG
GCTTTCTACCTAAGTTGGATAAAGTCACTCTGCTTCAGATGGATGCTAAATTACCTATTGATATATTTGAGAATGTGATGCAACTTGCAATTGAGGGCTGCAAAGCCATA
GCTAACTACATTCGAGAAGTGATGTTAGAGAATACCAAAAAACTCGAATATTGCCGTGGAGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCGTGAGCCCTGAAGGACTTCGCTTAGACGGTCGCCGTCCCATGGAGATGAGGCAAATTCGAGCAGAAATTGGCACCGTTTCTAAAGCAGATGGTTCTGCTGT
TTTTGAGATGGGTAACACCAAAGTTATTGCTGCTGTGTATGGTCCGAAAGAGGTTCAGAATAGGAGTCAACAAATGAGCAACCAAGCTCTGGTGCGCTGTGAATACACCA
TGGCTAATTTCAGTACTGGAGATCGCATGAGAAAACCCAAGGGTGACAGGCGATCCACAGAGATATCTTTAGTTATTCGTCAGACAATGGAGGAATGCATTCTAACACAT
TTAATGCCTCGGTCTCAGATAGATATTTTTGTCCAAGTTCTTCAAGCAGATGGAGGTACCAGATCAGCATGCATCAACGCTGCAACTTTGGCGCTTGCTGATGCTGGAAT
TCCCATGCGTGATATTGTTACTTCCTGCAGTGCTGGATACCTTAATAGCACTCCTCTGCTTGATTTGAATTATGTAGAGGATAGTGCTGGTGGCCCTGATGTCACCGTAG
GCTTTCTACCTAAGTTGGATAAAGTCACTCTGCTTCAGATGGATGCTAAATTACCTATTGATATATTTGAGAATGTGATGCAACTTGCAATTGAGGGCTGCAAAGCCATA
GCTAACTACATTCGAGAAGTGATGTTAGAGAATACCAAAAAACTCGAATATTGCCGTGGAGCGTAA
Protein sequenceShow/hide protein sequence
MEFVSPEGLRLDGRRPMEMRQIRAEIGTVSKADGSAVFEMGNTKVIAAVYGPKEVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTH
LMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENVMQLAIEGCKAI
ANYIREVMLENTKKLEYCRGA