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Spg010127 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010127
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAB6-interacting golgin
Genome locationscaffold7:5173213..5175189
RNA-Seq ExpressionSpg010127
SyntenySpg010127
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012941.1 hypothetical protein SDJN02_25694, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-4184.48Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREE-DEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR++  EM  KLT+STLQAREEEIER+KMEVKEKVELQL+RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREE-DEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQ
        LKSLGQICQKKVLQ Q
Subjt:  LKSLGQICQKKVLQCQ

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]1.2e-4084.48Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL
        MTSKNG   NG+RVL EG + R EDE VSKLT+STLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT KREL
Subjt:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL

Query:  KSLGQICQKKVLQCQE
        KSLGQICQKK  + +E
Subjt:  KSLGQICQKKVLQCQE

XP_022968566.1 uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima]9.0e-4182.35Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQEFL
        LKSLGQICQKK  + +E L
Subjt:  LKSLGQICQKKVLQCQEFL

XP_022968567.1 uncharacterized protein LOC111467754 isoform X2 [Cucurbita maxima]9.0e-4182.35Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQEFL
        LKSLGQICQKK  + +E L
Subjt:  LKSLGQICQKKVLQCQEFL

XP_022968568.1 uncharacterized protein LOC111467754 isoform X3 [Cucurbita maxima]4.1e-4183.76Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQE
        LKSLGQICQKK+L   E
Subjt:  LKSLGQICQKKVLQCQE

TrEMBL top hitse value%identityAlignment
A0A1S3BFW5 RAB6-interacting golgin5.7e-4184.48Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL
        MTSKNG   NG+RVL EG + R EDE VSKLT+STLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT KREL
Subjt:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL

Query:  KSLGQICQKKVLQCQE
        KSLGQICQKK  + +E
Subjt:  KSLGQICQKKVLQCQE

A0A5D3CFS0 RAB6-interacting golgin5.7e-4184.48Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL
        MTSKNG   NG+RVL EG + R EDE VSKLT+STLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT KREL
Subjt:  MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKREL

Query:  KSLGQICQKKVLQCQE
        KSLGQICQKK  + +E
Subjt:  KSLGQICQKKVLQCQE

A0A6J1HTV1 RAB6-interacting golgin4.4e-4182.35Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQEFL
        LKSLGQICQKK  + +E L
Subjt:  LKSLGQICQKKVLQCQEFL

A0A6J1HV92 RAB6-interacting golgin4.4e-4182.35Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQEFL
        LKSLGQICQKK  + +E L
Subjt:  LKSLGQICQKKVLQCQEFL

A0A6J1HYE2 RAB6-interacting golgin2.0e-4183.76Show/hide
Query:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE
        MTSK+GDE NGER++SEG  GR+ED EM  +LT+STLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK+E
Subjt:  MTSKNGDEANGERVLSEGGSGREED-EMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRE

Query:  LKSLGQICQKKVLQCQE
        LKSLGQICQKK+L   E
Subjt:  LKSLGQICQKKVLQCQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.3 Family of unknown function (DUF662)7.9e-1951.58Show/hide
Query:  EDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQCQEFL
        EDE +++  +S  +A+E+EIE+++MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+  +ELK LG   QKKV++ +E L
Subjt:  EDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQCQEFL

AT3G09980.1 Family of unknown function (DUF662)2.7e-1955.21Show/hide
Query:  EEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQCQEFL
        +EDE +S+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+  +ELK LG   QKK  + +E L
Subjt:  EEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQCQEFL

AT3G52900.1 Family of unknown function (DUF662)2.1e-1950.41Show/hide
Query:  MTSKNGDEANGERVLSEGGS---GREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK
        M+SKN   A     ++  G       E+E + K+ ++  QAREEEIERKKM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+ID A 
Subjt:  MTSKNGDEANGERVLSEGGS---GREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAK

Query:  RELKSLGQICQKKVLQCQEFL
        R++KSL Q CQKK  + ++ L
Subjt:  RELKSLGQICQKKVLQCQEFL

AT3G52920.1 Family of unknown function (DUF662)2.3e-1850.96Show/hide
Query:  LSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQC
        LS      +EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+  +ELK LG   QKK  + 
Subjt:  LSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQC

Query:  QEFL
        +E L
Subjt:  QEFL

AT3G52920.2 Family of unknown function (DUF662)2.3e-1850.96Show/hide
Query:  LSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQC
        LS      +EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+  +ELK LG   QKK  + 
Subjt:  LSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKKVLQC

Query:  QEFL
        +E L
Subjt:  QEFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTAAGAATGGAGATGAAGCAAATGGCGAGAGAGTTCTATCGGAGGGAGGTAGCGGTCGGGAGGAAGACGAGATGGTGTCAAAACTGACCATGTCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTTGAATTACAGTTAACCCGTGCCGAGGAAGAAGCCAAACGCTTAGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATAGACACAGCCAAGAGAGAACTGAAATCACTGGGACAGATCTGCCAAAAGAAG
GTGCTTCAATGTCAAGAATTTCTTTTACTTTCAGTTCTTTTTAAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTAAGAATGGAGATGAAGCAAATGGCGAGAGAGTTCTATCGGAGGGAGGTAGCGGTCGGGAGGAAGACGAGATGGTGTCAAAACTGACCATGTCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTTGAATTACAGTTAACCCGTGCCGAGGAAGAAGCCAAACGCTTAGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATAGACACAGCCAAGAGAGAACTGAAATCACTGGGACAGATCTGCCAAAAGAAG
GTGCTTCAATGTCAAGAATTTCTTTTACTTTCAGTTCTTTTTAAGATCTGA
Protein sequenceShow/hide protein sequence
MTSKNGDEANGERVLSEGGSGREEDEMVSKLTMSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKRELKSLGQICQKK
VLQCQEFLLLSVLFKI