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Spg010417 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010417
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmyb family transcription factor PHL7-like
Genome locationscaffold5:9996945..10000094
RNA-Seq ExpressionSpg010417
SyntenySpg010417
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053946.1 protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa]6.3e-3198.59Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG

KAG7027744.1 Myb family transcription factor PHL7, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-3198.59Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG

XP_004136602.1 myb family transcription factor PHL7 isoform X2 [Cucumis sativus]1.8e-30100Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

XP_008443159.1 PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Cucumis melo]9.1e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

XP_038904135.1 myb family transcription factor PHL7-like [Benincasa hispida]1.8e-30100Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

TrEMBL top hitse value%identityAlignment
A0A0A0LF93 HTH myb-type domain-containing protein8.8e-31100Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A5A7UI57 Protein PHR1-LIKE 1-like isoform X13.0e-3198.59Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG

A0A6J1DJV4 myb family transcription factor PHL7-like isoform X14.4e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A6J1G5N3 myb family transcription factor PHL7-like4.4e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A6J1I5A6 myb family transcription factor PHL7-like isoform X14.4e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

SwissProt top hitse value%identityAlignment
E5L8F7 Myb family transcription factor IPN21.6e-0571.43Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWT +LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

Q8LAJ7 Protein PHR1-LIKE 33.3e-0675Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWTS+LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

Q94A57 Protein PHR1-LIKE 27.3e-0671.43Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWT++LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

Q9SAK5 Myb family transcription factor APL1.9e-0641.67Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGS
        M+HAKK       P    G+ +  ++ V G S       P    K RLRWT +LH+RFVDA+ QLGGPD  +
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGS

Q9SJW0 Myb family transcription factor PHL79.5e-0680Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        KQRLRWT +LH+RFVDA+ QLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

Arabidopsis top hitse value%identityAlignment
AT1G79430.2 Homeodomain-like superfamily protein1.4e-0741.67Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGS
        M+HAKK       P    G+ +  ++ V G S       P    K RLRWT +LH+RFVDA+ QLGGPD  +
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGS

AT3G24120.1 Homeodomain-like superfamily protein5.2e-0771.43Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWT++LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

AT3G24120.2 Homeodomain-like superfamily protein5.2e-0771.43Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWT++LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

AT4G13640.1 Homeodomain-like superfamily protein2.3e-0775Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWTS+LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS

AT4G13640.2 Homeodomain-like superfamily protein2.3e-0775Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPDSGS
        K RLRWTS+LH+RFVDA+TQLGGPD  +
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPDSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCATGCTAAGAAATTTTCAACTGCGAGCTTAGTTCCACATAAATCTCAAGGTGCTGAACAAGGTGCAAGTGTTGCGGTTCTTGGTGGATCTACAGCCAAAAGTCC
AATGCCACCTGGAGGCGGTGGAAAACAACGGTTGCGATGGACATCGGATCTTCATGACCGTTTTGTGGATGCCATCACACAACTTGGTGGACCAGATAGTGGATCGAGGA
GGAAGAGGGATGACAGAAATGATGGAGCGCTGGACACACCATTGATGAACCAATATAAGCTGAATGTGGATGCTTCTTGTCATCCAAATCAGACCAAGACTGGTCTGGGG
GCGGTTATTAATCACCAGGGAAATCTTTTGGTGGCAACATCTGAAGTTCTTCGTGGCAGTATAAGCGCCCTTTCGGCTGAAGTGTTGGCAACGAATGCTTTACAGTTTAA
AGCTGGCAGCTCAATACGGTTACCACAACCTCTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCATGCTAAGAAATTTTCAACTGCGAGCTTAGTTCCACATAAATCTCAAGGTGCTGAACAAGGTGCAAGTGTTGCGGTTCTTGGTGGATCTACAGCCAAAAGTCC
AATGCCACCTGGAGGCGGTGGAAAACAACGGTTGCGATGGACATCGGATCTTCATGACCGTTTTGTGGATGCCATCACACAACTTGGTGGACCAGATAGTGGATCGAGGA
GGAAGAGGGATGACAGAAATGATGGAGCGCTGGACACACCATTGATGAACCAATATAAGCTGAATGTGGATGCTTCTTGTCATCCAAATCAGACCAAGACTGGTCTGGGG
GCGGTTATTAATCACCAGGGAAATCTTTTGGTGGCAACATCTGAAGTTCTTCGTGGCAGTATAAGCGCCCTTTCGGCTGAAGTGTTGGCAACGAATGCTTTACAGTTTAA
AGCTGGCAGCTCAATACGGTTACCACAACCTCTGGATTGA
Protein sequenceShow/hide protein sequence
MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGSRRKRDDRNDGALDTPLMNQYKLNVDASCHPNQTKTGLG
AVINHQGNLLVATSEVLRGSISALSAEVLATNALQFKAGSSIRLPQPLD