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Spg010427 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010427
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold5:12433368..12441478
RNA-Seq ExpressionSpg010427
SyntenySpg010427
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83188.1 hypothetical protein VITISV_040866 [Vitis vinifera]2.2e-3135.6Show/hide
Query:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP
        I +F  +  + DV+T++    M KG KK  +++ E +  CNKW+++ +SCS+ +  C    ++  +FV   Y + N+ ACYA +F+PIP +   P P+FP
Subjt:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP

Query:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRR
         ++P   ++R   RP SS I+NEMDW+ P VK +CG    ++     + CL  LY  +C+   +   ++ G  ILLQLW W+RFP +  ++
Subjt:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRR

RVW52006.1 hypothetical protein CK203_068088 [Vitis vinifera]1.5e-3252.21Show/hide
Query:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK
        N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP 
Subjt:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK

Query:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
        V+PN  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

RVW92351.1 hypothetical protein CK203_032440 [Vitis vinifera]2.6e-3251.09Show/hide
Query:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP
        +N+F     I +VTT+     M KG     VRL E +C CNKW+++ I CSH +  C R  ID  QF+   Y +  Y  CY  QF PIPDQ+ WP+PNFP
Subjt:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP

Query:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
         V+ N  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

RVX19406.1 hypothetical protein CK203_008540 [Vitis vinifera]1.5e-3252.21Show/hide
Query:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK
        N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP 
Subjt:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK

Query:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
        V+PN  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

XP_030950142.1 uncharacterized protein LOC115974062 [Quercus lobata]1.3e-2645.6Show/hide
Query:  INVFDYDLGICDVTTSIDP-ISMKGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP
        + VF ++ G+ +V T I+P  + +G  +H V L + +C C KW+ Y+I CSH I  CK  GI  +Q++   Y L   +ACYAL+F  +PD   W +PNFP
Subjt:  INVFDYDLGICDVTTSIDP-ISMKGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP

Query:  KVYPNVELMRGKGRPCSSRIRNEMD
         +YPNV+L R KGRP ++R+RNEMD
Subjt:  KVYPNVELMRGKGRPCSSRIRNEMD

TrEMBL top hitse value%identityAlignment
A0A438EWG2 SWIM-type domain-containing protein7.5e-3352.21Show/hide
Query:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK
        N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP 
Subjt:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK

Query:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
        V+PN  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

A0A438I6L2 SWIM-type domain-containing protein1.3e-3251.09Show/hide
Query:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP
        +N+F     I +VTT+     M KG     VRL E +C CNKW+++ I CSH +  C R  ID  QF+   Y +  Y  CY  QF PIPDQ+ WP+PNFP
Subjt:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP

Query:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
         V+ N  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

A0A438KDW5 SWIM-type domain-containing protein7.5e-3352.21Show/hide
Query:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK
        N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP 
Subjt:  NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPK

Query:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
        V+PN  L+R KGRP SSRIRNEMDW+EP VK RCG+
Subjt:  VYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

A5B5G3 SWIM-type domain-containing protein8.0e-2742.59Show/hide
Query:  VEMQVILLRPLLLENNGFKRIDDMKINVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALP
        +EM  + ++   LE    K +D + + +F       +V T++    M KG  K  V+L E +C CNKW+++ I CSH +A    + ID  Q V+  Y L 
Subjt:  VEMQVILLRPLLLENNGFKRIDDMKINVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALP

Query:  NYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM
         Y +CYA +F PIP +S WP P+FP ++P+   MR KGRP SSRIRNEMD KEP V+ RCG+
Subjt:  NYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM

A5B5G3 SWIM-type domain-containing protein4.6e-0646.77Show/hide
Query:  TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRRRH--RYENHPGDRPLAVR
        + CLA LYR LC+   ID  ++ G LILLQLW W+RFP +AP R     +++     PLA+R
Subjt:  TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRRRH--RYENHPGDRPLAVR

A5BFC6 PMD domain-containing protein1.1e-3135.6Show/hide
Query:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP
        I +F  +  + DV+T++    M KG KK  +++ E +  CNKW+++ +SCS+ +  C    ++  +FV   Y + N+ ACYA +F+PIP +   P P+FP
Subjt:  INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFP

Query:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRR
         ++P   ++R   RP SS I+NEMDW+ P VK +CG    ++     + CL  LY  +C+   +   ++ G  ILLQLW W+RFP +  ++
Subjt:  KVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase5.2e-1031.11Show/hide
Query:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPD----PNF--PKVYPNVELMRGKGR
        V+L + +C C +++  +  C HA+A C  + I+ +Q+V D Y +  Y   Y+ +F+P+P+ S WP+    P    P + P    + GKG+
Subjt:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPD----PNF--PKVYPNVELMRGKGR

AT1G64255.1 MuDR family transposase8.8e-1035.06Show/hide
Query:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPN-FPKVYPNV
        V+L + SC C  ++ Y+  C HA+A CK++  + +Q+V D Y L      YA  F+ +P+ S WP+ +  P++ P V
Subjt:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPN-FPKVYPNV

AT1G64260.1 MuDR family transposase1.8e-1034.67Show/hide
Query:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWP-DPNFPKVYP
        V+L   +C C K+++Y+  C HA+A  +++ I+ +Q+V + Y +  Y   YA  F+P+PD + WP D   P ++P
Subjt:  VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWP-DPNFPKVYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGGAACATAGTGCACGGTCTGAATGGTATAAAATATGACGTCGAACCATCTGTTCAGTTCAATGTTCCTCGTGATATTGCATACAACCAATTCATTCAATGGTT
ATGCAATGGATTGTCGATTGATAGAACTGAAGGGTTGGATGTCATCTTTAGATATGACACTATTGGGTTTGAAGGGTCTACTTATTATGTTCCTGTCCCGTTACGAAGTG
AGATTGATTTTAGGTTTATGATGAACCTTGCTCTACCTCTTCCTAATAGAGTAGAGCTCTTTATTCCTCGCCAAAACATCATTCATATGGATCCAAATAGACCTGTTGAA
CACGTATCTGAACCTGATTATACACCGGAGGATGAAGCTGAAGATGACCCGAATGTTGATAATGTTGATGAAGTGGGTGTGGATAATTTGGATGGAGAGAATGTAGACTC
TACCCTGGTCACGAATGAAGACGTTGGAACAGAACCTGACAATGAAAGCACTGAAGGACCGTCTGATGATGATGGAGAGGAAGAGCCTCAGATGTATGTAATCGAAATGT
TAACTCCATGGGAGGTAGGGGTGTTCATCGAATCCGATGACCCGAAAAACCCGGACAACCCAACCCAAATTATAAGGCCGCCGGCAGTGCCTCTTCTTCGTGACGCCGGT
TCCTCCTTTCACTTCACTGTCGTCGTAACGCAGATCGTCAATAATCAATTAATCACCACGGAGTCGGACACAGAAGAATCACCCCTATGGATAACAGTAGTGGAAATGCA
AGTGATATTACTTCGCCCTCTGTTGTTGGAAAATAATGGATTCAAGCGGATTGATGATATGAAGATCAATGTGTTTGACTACGATTTGGGTATATGCGACGTCACGACTT
CAATAGACCCAATATCGATGAAAGGTGGAAAAAAACATCACGTGAGGTTATATGAGGAGTCGTGTGTTTGCAATAAGTGGAAAACATATCGAATTTCATGTTCCCACGCT
ATCGCTGCTTGCAAACGAATAGGCATCGATTACATTCAATTTGTTCAAGATCCCTATGCCCTACCAAATTATTTGGCATGCTATGCACTGCAGTTTACACCAATCCCTGA
TCAGAGTTGTTGGCCTGATCCAAACTTCCCGAAAGTGTATCCTAACGTCGAGTTGATGAGAGGGAAGGGTCGACCATGCAGTTCTCGTATAAGAAACGAGATGGATTGGA
AGGAGCCAATGGTTAAAACACGATGTGGAATGGGAGATGATATTACTACAGGATGTCTGGCGTTGTTATACAGGAACCTCTGCAAGGGTTTAGTTATAGATGCCAGAGAG
TTGGGCGGATCACTTATCCTGCTTCAATTGTGGACGTGGGACCGGTTCCCTACTGTAGCTCCCCGACGACGGCACCGGTATGAAAACCATCCAGGAGATCGGCCATTGGC
AGTTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGGAACATAGTGCACGGTCTGAATGGTATAAAATATGACGTCGAACCATCTGTTCAGTTCAATGTTCCTCGTGATATTGCATACAACCAATTCATTCAATGGTT
ATGCAATGGATTGTCGATTGATAGAACTGAAGGGTTGGATGTCATCTTTAGATATGACACTATTGGGTTTGAAGGGTCTACTTATTATGTTCCTGTCCCGTTACGAAGTG
AGATTGATTTTAGGTTTATGATGAACCTTGCTCTACCTCTTCCTAATAGAGTAGAGCTCTTTATTCCTCGCCAAAACATCATTCATATGGATCCAAATAGACCTGTTGAA
CACGTATCTGAACCTGATTATACACCGGAGGATGAAGCTGAAGATGACCCGAATGTTGATAATGTTGATGAAGTGGGTGTGGATAATTTGGATGGAGAGAATGTAGACTC
TACCCTGGTCACGAATGAAGACGTTGGAACAGAACCTGACAATGAAAGCACTGAAGGACCGTCTGATGATGATGGAGAGGAAGAGCCTCAGATGTATGTAATCGAAATGT
TAACTCCATGGGAGGTAGGGGTGTTCATCGAATCCGATGACCCGAAAAACCCGGACAACCCAACCCAAATTATAAGGCCGCCGGCAGTGCCTCTTCTTCGTGACGCCGGT
TCCTCCTTTCACTTCACTGTCGTCGTAACGCAGATCGTCAATAATCAATTAATCACCACGGAGTCGGACACAGAAGAATCACCCCTATGGATAACAGTAGTGGAAATGCA
AGTGATATTACTTCGCCCTCTGTTGTTGGAAAATAATGGATTCAAGCGGATTGATGATATGAAGATCAATGTGTTTGACTACGATTTGGGTATATGCGACGTCACGACTT
CAATAGACCCAATATCGATGAAAGGTGGAAAAAAACATCACGTGAGGTTATATGAGGAGTCGTGTGTTTGCAATAAGTGGAAAACATATCGAATTTCATGTTCCCACGCT
ATCGCTGCTTGCAAACGAATAGGCATCGATTACATTCAATTTGTTCAAGATCCCTATGCCCTACCAAATTATTTGGCATGCTATGCACTGCAGTTTACACCAATCCCTGA
TCAGAGTTGTTGGCCTGATCCAAACTTCCCGAAAGTGTATCCTAACGTCGAGTTGATGAGAGGGAAGGGTCGACCATGCAGTTCTCGTATAAGAAACGAGATGGATTGGA
AGGAGCCAATGGTTAAAACACGATGTGGAATGGGAGATGATATTACTACAGGATGTCTGGCGTTGTTATACAGGAACCTCTGCAAGGGTTTAGTTATAGATGCCAGAGAG
TTGGGCGGATCACTTATCCTGCTTCAATTGTGGACGTGGGACCGGTTCCCTACTGTAGCTCCCCGACGACGGCACCGGTATGAAAACCATCCAGGAGATCGGCCATTGGC
AGTTCGGTAA
Protein sequenceShow/hide protein sequence
MNGNIVHGLNGIKYDVEPSVQFNVPRDIAYNQFIQWLCNGLSIDRTEGLDVIFRYDTIGFEGSTYYVPVPLRSEIDFRFMMNLALPLPNRVELFIPRQNIIHMDPNRPVE
HVSEPDYTPEDEAEDDPNVDNVDEVGVDNLDGENVDSTLVTNEDVGTEPDNESTEGPSDDDGEEEPQMYVIEMLTPWEVGVFIESDDPKNPDNPTQIIRPPAVPLLRDAG
SSFHFTVVVTQIVNNQLITTESDTEESPLWITVVEMQVILLRPLLLENNGFKRIDDMKINVFDYDLGICDVTTSIDPISMKGGKKHHVRLYEESCVCNKWKTYRISCSHA
IAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDITTGCLALLYRNLCKGLVIDARE
LGGSLILLQLWTWDRFPTVAPRRRHRYENHPGDRPLAVR