; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010477 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010477
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationscaffold5:12063775..12068173
RNA-Seq ExpressionSpg010477
SyntenySpg010477
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136624.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus]9.2e-9992.79Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD   DGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

XP_008443218.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo]9.9e-10194.23Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD AGDGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

XP_022936188.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita moschata]3.0e-9793.24Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        M+AKSGSLDYWR+YFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDV   DGETGFKSDSAGDG  FE GGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMNFNQVSNYSFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD LQATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLI
        +L R LI
Subjt:  NLARVLI

XP_038904902.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida]1.5e-10194.71Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD AGDGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

XP_038904903.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida]1.5e-10194.71Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD AGDGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

TrEMBL top hitse value%identityAlignment
A0A0A0LBK9 TFIIS N-terminal domain-containing protein4.5e-9992.79Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD   DGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

A0A1S3B7K4 probable mediator of RNA polymerase II transcription subunit 26b4.8e-10194.23Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD AGDGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b4.8e-10194.23Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        MAAKSGSLD WRNYFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DGDDGETGFKSD AGDGCEFEAGGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLIM
        +LARVLIM
Subjt:  NLARVLIM

A0A6J1DCU0 probable mediator of RNA polymerase II transcription subunit 26b2.5e-9790.87Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGC-EFEAGGS
        MAAKS SLDYWRNYFRNANSDIFS+IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAV GDVDGDDGE GFKSD A D C EFEAGGS
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGC-EFEAGGS

Query:  KESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRI
        KESK YSSRDD+GEMN NQVSNYS+GEAEALTDEIEQES+I GE+LRIKEILNNFEEESDS+LFESLRRLELM+LSVDTLQATEIGK VNGLRKHGSK I
Subjt:  KESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRI

Query:  RNLARVLI
        RNLARVLI
Subjt:  RNLARVLI

A0A6J1FCK1 probable mediator of RNA polymerase II transcription subunit 26b1.4e-9793.24Show/hide
Query:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK
        M+AKSGSLDYWR+YFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDV   DGETGFKSDSAGDG  FE GGSK
Subjt:  MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSK

Query:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMNFNQVSNYSFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD LQATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIR

Query:  NLARVLI
        +L R LI
Subjt:  NLARVLI

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a5.0e-3947.52Show/hide
Query:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV
        S SLD WR YFR  +SDIF +ID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD      E   +    G G             
Subjt:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV

Query:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR
             DR             G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR

Query:  VL
         L
Subjt:  VL

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c1.5e-1131.84Show/hide
Query:  LDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKVYS
        LD +R+   NA  D+++ ID AILVA+ D  +E + RRD I E+L++  +  +C  CD       G+V     E      + G   E      +E    +
Subjt:  LDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKVYS

Query:  SRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLARVL
        + ++  E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R LA+ L
Subjt:  SRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLARVL

Query:  I
        +
Subjt:  I

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b6.5e-5559.02Show/hide
Query:  SGSLDYWRNYF-RNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFE-AGGSKES
        SGSLD WR YF R  +SDIF +ID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDYWRNYF-RNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFE-AGGSKES

Query:  KVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNL
        K  SSR D  ++    VSNY+F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNL

Query:  ARVLI
        A+ LI
Subjt:  ARVLI

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein3.6e-4047.52Show/hide
Query:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV
        S SLD WR YFR  +SDIF +ID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD      E   +    G G             
Subjt:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV

Query:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR
             DR             G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR

Query:  VL
         L
Subjt:  VL

AT3G10820.2 Transcription elongation factor (TFIIS) family protein3.6e-4047.52Show/hide
Query:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV
        S SLD WR YFR  +SDIF +ID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD      E   +    G G             
Subjt:  SGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKV

Query:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR
             DR             G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLAR

Query:  VL
         L
Subjt:  VL

AT5G05140.1 Transcription elongation factor (TFIIS) family protein4.6e-5659.02Show/hide
Query:  SGSLDYWRNYF-RNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFE-AGGSKES
        SGSLD WR YF R  +SDIF +ID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDYWRNYF-RNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFE-AGGSKES

Query:  KVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNL
        K  SSR D  ++    VSNY+F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNL

Query:  ARVLI
        A+ LI
Subjt:  ARVLI

AT5G09850.1 Transcription elongation factor (TFIIS) family protein1.1e-1231.84Show/hide
Query:  LDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKVYS
        LD +R+   NA  D+++ ID AILVA+ D  +E + RRD I E+L++  +  +C  CD       G+V     E      + G   E      +E    +
Subjt:  LDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKVYS

Query:  SRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLARVL
        + ++  E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R LA+ L
Subjt:  SRDDRGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLARVL

Query:  I
        +
Subjt:  I


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGTCTGGGTCGTTGGATTACTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTAGCTTAATCGATTATGCAATCTTGGTGGCGGCTTCCGATTG
TCCCAAGGAGTTCAGATTGAGGAGAGATCGAATTGCAGAGCAGTTGTTTTCTTGCCGATTGACTCGCTGTTTGGGCTGCGACCGAGTGGAGCTCGCGGTGGCCGGTGACG
TCGACGGCGACGATGGTGAAACGGGTTTCAAGAGCGATTCTGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGCAGTAGAGATGAT
CGAGGGGAGATGAATTTCAATCAGGTTAGCAATTATAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAACAAGAATCTCAGATTGTTGGGGAGGTTCTGAGGAT
CAAAGAGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTGAGGAGACTTGAACTGATGGCTCTATCAGTTGATACCCTGCAGGCAACTGAAA
TTGGCAAGGCTGTTAATGGTCTTCGAAAGCATGGATCGAAGCGCATCCGCAATCTTGCTCGAGTTCTTATCATGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAAGTCTGGGTCGTTGGATTACTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTAGCTTAATCGATTATGCAATCTTGGTGGCGGCTTCCGATTG
TCCCAAGGAGTTCAGATTGAGGAGAGATCGAATTGCAGAGCAGTTGTTTTCTTGCCGATTGACTCGCTGTTTGGGCTGCGACCGAGTGGAGCTCGCGGTGGCCGGTGACG
TCGACGGCGACGATGGTGAAACGGGTTTCAAGAGCGATTCTGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGCAGTAGAGATGAT
CGAGGGGAGATGAATTTCAATCAGGTTAGCAATTATAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAACAAGAATCTCAGATTGTTGGGGAGGTTCTGAGGAT
CAAAGAGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTGAGGAGACTTGAACTGATGGCTCTATCAGTTGATACCCTGCAGGCAACTGAAA
TTGGCAAGGCTGTTAATGGTCTTCGAAAGCATGGATCGAAGCGCATCCGCAATCTTGCTCGAGTTCTTATCATGTACTAA
Protein sequenceShow/hide protein sequence
MAAKSGSLDYWRNYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDVDGDDGETGFKSDSAGDGCEFEAGGSKESKVYSSRDD
RGEMNFNQVSNYSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQATEIGKAVNGLRKHGSKRIRNLARVLIMY