; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010501 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010501
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold5:8950828..8953917
RNA-Seq ExpressionSpg010501
SyntenySpg010501
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035658.1 hypothetical protein E6C27_scaffold285G003540 [Cucumis melo var. makuwa]3.6e-1432.09Show/hide
Query:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILKQDT-LEQQL
        V S IPS S+PKL KN G+N  GK+IRL E   +   +  ++H + S +S  D HWKRP  K KVS  ++D          + P+  P+   +  LE  +
Subjt:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILKQDT-LEQQL

Query:  AQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI
           S+E          ++     + +++ E  +A++QQ L+V K++ E+  +E  P + +E  ++L TV  +++  REE +NFKW +
Subjt:  AQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI

KAA0042126.1 hypothetical protein E6C27_scaffold67G006100 [Cucumis melo var. makuwa]4.1e-1038.28Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH
        K+      + S YF EY+ RELIH GA I W+ N+Q              S +     P+LPKN GSN  GK+IRL E       +   +H + S +   
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH

Query:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA
        D HWKRP KK KVS  ++D    G+P A
Subjt:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]3.4e-1238.89Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ--------------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHG
        K+        S YF EY+ RELIH GA I W+ N+Q                    V SAIP PS+P+L KN GSN  GK+IRL E       +   +H 
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ--------------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHG

Query:  ETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQLAQSSEE
          S +S  D HWKRP KK KVS  + D    G+ SA + P  PP+    D LE  +   S+E
Subjt:  ETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQLAQSSEE

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]1.4e-0231.62Show/hide
Query:  VDNSFDGVPSAFQFPSPPPILKQDTLEQQLAQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVR
        VDN F+ V S++        L      +QL + +  IKE       T+VK  +    V +   A++QQ L+V K+ +E+  +E    + +E  + L TVR
Subjt:  VDNSFDGVPSAFQFPSPPPILKQDTLEQQLAQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVR

Query:  TNLEGLREELRNFKWMI
         ++E  REE +NFKW +
Subjt:  TNLEGLREELRNFKWMI

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]2.2e-1128.21Show/hide
Query:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQL
        V SAIP PS+P+LPKN GSN  GK+IRL E       +  ++H + S +S  D HWKRP KK KVS  N D    G+ SA   P  PP+    D LE  +
Subjt:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQL

Query:  AQSSEEI-----------------------------------------------KELEA-----------------------------------------
        A  S+E                                                K+LE+                                         
Subjt:  AQSSEEI-----------------------------------------------KELEA-----------------------------------------

Query:  --KLETTIVKHEKLSNSVCEGE---KALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI
          K   T+VK  +    +   E   KA++QQ L++ K+++E+  +E  P + +E  ++L TVR ++E  REE +NFKW +
Subjt:  --KLETTIVKHEKLSNSVCEGE---KALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI

TYK18070.1 hypothetical protein E5676_scaffold306G004010 [Cucumis melo var. makuwa]4.1e-1038.28Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH
        K+      + S YF EY+ RELIH GA I W+ N+Q              S +     P+LPKN GSN  GK+IRL E       +   +H + S +   
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH

Query:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA
        D HWKRP KK KVS  ++D    G+P A
Subjt:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA

TrEMBL top hitse value%identityAlignment
A0A5A7TJH3 PMD domain-containing protein2.0e-1038.28Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH
        K+      + S YF EY+ RELIH GA I W+ N+Q              S +     P+LPKN GSN  GK+IRL E       +   +H + S +   
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH

Query:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA
        D HWKRP KK KVS  ++D    G+P A
Subjt:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA

A0A5A7U349 PMD domain-containing protein1.6e-1238.89Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ--------------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHG
        K+        S YF EY+ RELIH GA I W+ N+Q                    V SAIP PS+P+L KN GSN  GK+IRL E       +   +H 
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ--------------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHG

Query:  ETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQLAQSSEE
          S +S  D HWKRP KK KVS  + D    G+ SA + P  PP+    D LE  +   S+E
Subjt:  ETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQLAQSSEE

A0A5A7U349 PMD domain-containing protein6.9e-0331.62Show/hide
Query:  VDNSFDGVPSAFQFPSPPPILKQDTLEQQLAQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVR
        VDN F+ V S++        L      +QL + +  IKE       T+VK  +    V +   A++QQ L+V K+ +E+  +E    + +E  + L TVR
Subjt:  VDNSFDGVPSAFQFPSPPPILKQDTLEQQLAQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVR

Query:  TNLEGLREELRNFKWMI
         ++E  REE +NFKW +
Subjt:  TNLEGLREELRNFKWMI

A0A5A7U349 PMD domain-containing protein1.1e-1128.21Show/hide
Query:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQL
        V SAIP PS+P+LPKN GSN  GK+IRL E       +  ++H + S +S  D HWKRP KK KVS  N D    G+ SA   P  PP+    D LE  +
Subjt:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILK-QDTLEQQL

Query:  AQSSEEI-----------------------------------------------KELEA-----------------------------------------
        A  S+E                                                K+LE+                                         
Subjt:  AQSSEEI-----------------------------------------------KELEA-----------------------------------------

Query:  --KLETTIVKHEKLSNSVCEGE---KALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI
          K   T+VK  +    +   E   KA++QQ L++ K+++E+  +E  P + +E  ++L TVR ++E  REE +NFKW +
Subjt:  --KLETTIVKHEKLSNSVCEGE---KALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI

A0A5D3D2X6 PMD domain-containing protein2.0e-1038.28Show/hide
Query:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH
        K+      + S YF EY+ RELIH GA I W+ N+Q              S +     P+LPKN GSN  GK+IRL E       +   +H + S +   
Subjt:  KVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQ------------VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSH

Query:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA
        D HWKRP KK KVS  ++D    G+P A
Subjt:  DHHWKRPPKKTKVSSTNVDNSFDGVPSA

A0A5D3E6F4 Uncharacterized protein1.8e-1432.09Show/hide
Query:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILKQDT-LEQQL
        V S IPS S+PKL KN G+N  GK+IRL E   +   +  ++H + S +S  D HWKRP  K KVS  ++D          + P+  P+   +  LE  +
Subjt:  VGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILKQDT-LEQQL

Query:  AQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI
           S+E          ++     + +++ E  +A++QQ L+V K++ E+  +E  P + +E  ++L TV  +++  REE +NFKW +
Subjt:  AQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLDTVRTNLEGLREELRNFKWMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTGAAGTCCAGATCCTACTGCAAGACTCCGAAGATCGAAGCTTCTGCAAAGTTCAAAAGCTTGAAGCTTCTGCAAAATCAAAATACTTTGAAGAGTACAAGGT
TCGTGAACTGATCCACAAGGGTGCATCCATCCTATGGAATGTGAATATTCAAGTGGGCAGTGCCATTCCTTCTCCATCTCGTCCTAAACTACCCAAAAATAATGGGAGTA
ATCACAGAGGAAAGAAGATTCGCTTGCCCGAGGATGACACTTCTGTTCCTGTACAAAATGCTTCAAAACATGGCGAAACAAGCTGCAACAGTTCTCACGATCATCATTGG
AAGAGACCACCCAAGAAAACAAAGGTGTCTTCCACAAATGTAGATAACTCTTTTGATGGGGTTCCAAGTGCTTTTCAATTCCCTAGTCCTCCTCCAATTTTGAAGCAGGA
CACGCTCGAACAACAACTAGCACAATCATCCGAGGAGATAAAGGAACTAGAGGCCAAACTGGAGACAACAATAGTCAAGCATGAGAAGCTTTCCAATTCGGTTTGTGAGG
GAGAGAAAGCTTTGGAGCAACAGAGACTCAAAGTTACTAAGGTCCGTGAAGAGATTGCCAATATTGAATGTGTCCCTCTCATGATTGATGAGGATGCTAAGTCTTTGGAC
ACAGTTCGTACCAACTTAGAGGGTCTACGTGAAGAGCTAAGGAACTTCAAGTGGATGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTGAAGTCCAGATCCTACTGCAAGACTCCGAAGATCGAAGCTTCTGCAAAGTTCAAAAGCTTGAAGCTTCTGCAAAATCAAAATACTTTGAAGAGTACAAGGT
TCGTGAACTGATCCACAAGGGTGCATCCATCCTATGGAATGTGAATATTCAAGTGGGCAGTGCCATTCCTTCTCCATCTCGTCCTAAACTACCCAAAAATAATGGGAGTA
ATCACAGAGGAAAGAAGATTCGCTTGCCCGAGGATGACACTTCTGTTCCTGTACAAAATGCTTCAAAACATGGCGAAACAAGCTGCAACAGTTCTCACGATCATCATTGG
AAGAGACCACCCAAGAAAACAAAGGTGTCTTCCACAAATGTAGATAACTCTTTTGATGGGGTTCCAAGTGCTTTTCAATTCCCTAGTCCTCCTCCAATTTTGAAGCAGGA
CACGCTCGAACAACAACTAGCACAATCATCCGAGGAGATAAAGGAACTAGAGGCCAAACTGGAGACAACAATAGTCAAGCATGAGAAGCTTTCCAATTCGGTTTGTGAGG
GAGAGAAAGCTTTGGAGCAACAGAGACTCAAAGTTACTAAGGTCCGTGAAGAGATTGCCAATATTGAATGTGTCCCTCTCATGATTGATGAGGATGCTAAGTCTTTGGAC
ACAGTTCGTACCAACTTAGAGGGTCTACGTGAAGAGCTAAGGAACTTCAAGTGGATGATTTAA
Protein sequenceShow/hide protein sequence
MKIEVQILLQDSEDRSFCKVQKLEASAKSKYFEEYKVRELIHKGASILWNVNIQVGSAIPSPSRPKLPKNNGSNHRGKKIRLPEDDTSVPVQNASKHGETSCNSSHDHHW
KRPPKKTKVSSTNVDNSFDGVPSAFQFPSPPPILKQDTLEQQLAQSSEEIKELEAKLETTIVKHEKLSNSVCEGEKALEQQRLKVTKVREEIANIECVPLMIDEDAKSLD
TVRTNLEGLREELRNFKWMI