CuGenDBv2

Gene ID	Spg010509
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pheophytinase, chloroplastic-like
Genome location	scaffold5:11407454..11413149
RNA-Seq Expression	Spg010509
Synteny	Spg010509
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR029058 - Alpha/Beta hydrolase fold

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146511.1 pheophytinase, chloroplastic [Cucumis sativus]

1.1e-30

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

XP_008452064.1 PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis melo]

8.2e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

XP_008452066.1 PREDICTED: pheophytinase, chloroplastic isoform X2 [Cucumis melo]

8.2e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

XP_022941712.1 pheophytinase, chloroplastic-like [Cucurbita moschata]

6.9e-30

89.87

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGL EQVRGVVLLNS GQFGD NKL DEPEET F+KFILKPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

XP_038896087.1 pheophytinase, chloroplastic [Benincasa hispida]

1.6e-31

92.41

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLP+QVRGVVLLNS GQFGDVNKL DEPEET FQKFILKPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWQ9 AB hydrolase-1 domain-containing protein

5.2e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

A0A1S3BSY0 pheophytinase, chloroplastic isoform X1

4.0e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

A0A1S3BU47 pheophytinase, chloroplastic isoform X2

4.0e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

A0A5A7TNN5 Pheophytinase

4.0e-31

91.14

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGLPEQVRGVVLLNS GQFGDVNKL +EPEET FQKFI KPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

A0A6J1FN92 pheophytinase, chloroplastic-like

3.3e-30

89.87

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF ALVSAAGL EQVRGVVLLNS GQFGD NKL DEPEET F+KFILKPLKDFF RIFLGVLFWQTKQPARIVSVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

SwissProt top hits

e value

%identity

Alignment

Q10MI0 Protein SEMI-ROLLED LEAF 2

1.7e-07

57.14

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Query:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPR
        G +S ++ P C S+C  CPA+R  SR+PVKRYKKL+A+IFP+
Subjt:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPR

Arabidopsis top hits

e value

%identity

Alignment

AT1G05960.1 ARM repeat superfamily protein

3.0e-15

76.74

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Query:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN
        GV+SR+VLP CG+LCFFCP++RARSR PVKRYKK++A+IFPRN
Subjt:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN

AT1G05960.2 ARM repeat superfamily protein

3.0e-15

76.74

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Query:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN
        GV+SR+VLP CG+LCFFCP++RARSR PVKRYKK++A+IFPRN
Subjt:  GVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN

AT2G41830.1 Uncharacterized protein

1.3e-18

87.5

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Query:  MSVISGVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN
        MS +SGVISRQVLPVCGSLC  CPA+RARSRQPVKRYKKLIA+IFPRN
Subjt:  MSVISGVISRQVLPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRN

AT4G36530.1 alpha/beta-Hydrolases superfamily protein

1.1e-20

62.03

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF AL  A GLPEQV GV LLNS GQF   ++  +E +ET   KFI+KPLK+ F R+ LG LFWQ KQP+RI SVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

AT4G36530.2 alpha/beta-Hydrolases superfamily protein

1.1e-20

62.03

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Query:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK
        LGGF AL  A GLPEQV GV LLNS GQF   ++  +E +ET   KFI+KPLK+ F R+ LG LFWQ KQP+RI SVLK
Subjt:  LGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFFPRIFLGVLFWQTKQPARIVSVLK

Sequences

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CDS sequence

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ATGATCCAACGATGGCGATGGCTTCAGGATCAGCCATCCATGTATTGTGGACCCACAGACAACCTTGCCGTTGAAAAGCAAATCGATTCGAGAGAGAGAGAGAGTGAGAT
TTTTGCGGTGGAATTAAACGCTGGGAATCCGGGTACGTTTTTATTTCTTCATAGCTTTAGAGGAATTTCGGCCTCTGCGGCTCTTTCAGACAATGATCGTAGAAGGGAAA
GAAAGGGCTATCTTGTGAGGGCTTGCGGGGGTTTTTTATGTGTTTGTGATTGTACATATTTTTGTATTTTGAAAATGAGCGTTATTTCGGGTGTGATTTCTCGGCAAGTC
TTGCCTGTATGTGGGAGTCTTTGTTTCTTCTGTCCAGCAATGAGGGCAAGGTCTAGACAGCCTGTGAAGAGATACAAGAAGCTTATTGCAGATATATTTCCTCGTAATCT
GGTTTTTGAAGTTGTCTCTGGCATGGAAGTAAACTTGGCTAAGCTTCTATGCCTTGGAGGGTTTATCGCCTTGGTTTCAGCAGCGGGGTTGCCAGAGCAAGTTCGTGGAG
TTGTATTACTAAACTCTGTCGGGCAGTTTGGAGATGTAAATAAGTTGGCCGATGAACCAGAAGAAACAGGTTTCCAGAAGTTCATTCTGAAGCCACTGAAAGATTTTTTT
CCGCGAATCTTTCTTGGAGTTCTTTTCTGGCAAACTAAGCAACCAGCTAGAATTGTTTCTGTTTTGAAGAAAGGTCTATCTCTCTTTGTGGTTCGCCATGACCGCCGGTT
ACCTCGGCTAATCTTTACGATTAGGGCTCTGAGTGTTCGATGA

mRNA sequence

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Protein sequence

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MIQRWRWLQDQPSMYCGPTDNLAVEKQIDSRERESEIFAVELNAGNPGTFLFLHSFRGISASAALSDNDRRRERKGYLVRACGGFLCVCDCTYFCILKMSVISGVISRQV
LPVCGSLCFFCPAMRARSRQPVKRYKKLIADIFPRNLVFEVVSGMEVNLAKLLCLGGFIALVSAAGLPEQVRGVVLLNSVGQFGDVNKLADEPEETGFQKFILKPLKDFF
PRIFLGVLFWQTKQPARIVSVLKKGLSLFVVRHDRRLPRLIFTIRALSVR

Spg010509 (gene) of Sponge gourd (cylindrica) v1 genome