CuGenDBv2

Gene ID	Spg010518
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nudix hydrolase 23
Genome location	scaffold5:12462114..12466245
RNA-Seq Expression	Spg010518
Synteny	Spg010518
Gene Ontology terms	GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR000086 - NUDIX hydrolase domain IPR015797 - NUDIX hydrolase-like domain superfamily IPR020084 - NUDIX hydrolase, conserved site IPR029401 - Nudix hydrolase, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580804.1 Nudix hydrolase 23, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-30

44.16

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHSAEKIRN+RFCQWCGGQTKHGIPD EEKLRAICT+  +                                  TLPAGY+EIGESA 
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 +LYVEDVKAGR+SFHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

XP_008443047.1 PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Cucumis melo]

1.1e-31

46.19

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHS+EKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  R                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAGR +FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

XP_022158352.1 nudix hydrolase 23, chloroplastic isoform X2 [Momordica charantia]

5.6e-31

45.69

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVV SAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  +                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAG+I+FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

XP_022983042.1 nudix hydrolase 23, chloroplastic [Cucurbita maxima]

1.6e-30

44.16

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHSAEKIRN+RFCQWCGGQTKHGIPD EEKLRAICT+  +                                  TLPAGY+EIGESA 
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 +LYVEDVKAGR+SFHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

XP_038904907.1 nudix hydrolase 23, chloroplastic isoform X2 [Benincasa hispida]

1.5e-31

46.19

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHS+EKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  +                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAGRI FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B747 nudix hydrolase 23, chloroplastic isoform X2

5.4e-32

46.19

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHS+EKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  R                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAGR +FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

A0A5A7TPK7 Nudix hydrolase 23

5.4e-32

46.19

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHS+EKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  R                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAGR +FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

A0A6J1DX07 nudix hydrolase 23, chloroplastic isoform X2

2.7e-31

45.69

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVV SAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICT+  +                                  TLPAGYLEIGESAA
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 RLYVEDVKAG+I+FHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

A0A6J1F791 nudix hydrolase 23, chloroplastic

1.7e-30

43.65

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHSAE+IRN+RFCQWCGGQTKHGIPD EEKLRAICT+  +                                  TLPAGY+EIGESA 
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 +LYVEDVKAGR+SFHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

A0A6J1IY67 nudix hydrolase 23, chloroplastic

7.8e-31

44.16

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Query:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA
        MSESP PSSSTVVHSAEKIRN+RFCQWCGGQTKHGIPD EEKLRAICT+  +                                  TLPAGY+EIGESA 
Subjt:  MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAA

Query:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        DGAIRETLEEA                                                                 +LYVEDVKAGR+SFHYGTINK
Subjt:  DGAIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

SwissProt top hits

e value

%identity

Alignment

P93740 Nudix hydrolase 23, chloroplastic

1.3e-19

33.85

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Query:  PLPSSSTV--VHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAADG
        P+ +S T   V SA  +R I+FCQWCGG TKH IPDGEEKLRAICT   +                                  TLPAGYLE+GESAA G
Subjt:  PLPSSSTV--VHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAADG

Query:  AIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        A+RET EEA                                                                  LY+ED+K G++ FHYGTINK
Subjt:  AIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

Arabidopsis top hits

e value

%identity

Alignment

AT2G42070.1 nudix hydrolase homolog 23

9.5e-21

33.85

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Query:  PLPSSSTV--VHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAADG
        P+ +S T   V SA  +R I+FCQWCGG TKH IPDGEEKLRAICT   +                                  TLPAGYLE+GESAA G
Subjt:  PLPSSSTV--VHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNR----------------------------------TLPAGYLEIGESAADG

Query:  AIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK
        A+RET EEA                                                                  LY+ED+K G++ FHYGTINK
Subjt:  AIRETLEEA-----------------------------------------------------------------RLYVEDVKAGRISFHYGTINK

Sequences

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CDS sequence

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ATGTCAGAATCACCGCTTCCTTCATCTTCGACTGTAGTCCACTCAGCTGAAAAAATTCGTAATATACGGTTCTGTCAGTGGTGTGGAGGCCAAACGAAGCATGGAATACC
TGATGGAGAGGAGAAGTTGAGAGCTATCTGCACATTGTTCAATAGGACTCTTCCAGCTGGTTACTTGGAAATTGGGGAGTCAGCTGCTGATGGTGCCATTAGGGAAACCT
TGGAAGAAGCAAGACTGTATGTTGAGGATGTGAAGGCAGGAAGAATCTCATTCCATTATGGCACCATCAATAAAAGCACCATTAGTGTCAGATTTTGTGCTTATTAA

mRNA sequence

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Protein sequence

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MSESPLPSSSTVVHSAEKIRNIRFCQWCGGQTKHGIPDGEEKLRAICTLFNRTLPAGYLEIGESAADGAIRETLEEARLYVEDVKAGRISFHYGTINKSTISVRFCAY

Spg010518 (gene) of Sponge gourd (cylindrica) v1 genome