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Spg010566 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010566
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:12240313..12246030
RNA-Seq ExpressionSpg010566
SyntenySpg010566
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53039.1 hypothetical protein EZV62_022208 [Acer yangbiense]5.5e-1835.97Show/hide
Query:  LGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQY
        L  I  K+ E+Q  SN+     +  I   +KEL++LL ++E YWKQR+RE+WL+ GDKNT++FH +A++ R +N I+GL D LG W  +  G+  + ++Y
Subjt:  LGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQY

Query:  FGKLFQTSDPQMESIKDDAMAILNTPISSTWEKADSITH
        F ++F++S+P +  +  D   +L   +   W + + + H
Subjt:  FGKLFQTSDPQMESIKDDAMAILNTPISSTWEKADSITH

XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]2.4e-1841.13Show/hide
Query:  ETWSKYE-ECREIVLGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIW
        + WSK E   R+  L  +++K K I+   +  D  D   + K + +++N+L+D+EI+WKQR+R DWL+ GDKNTK+FH KA++RRK+N+I G++D+ G W
Subjt:  ETWSKYE-ECREIVLGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIW

Query:  TEEDNGMELIANQYFGKLFQTSDP---QMESIKDDAMAILN
        TE+ + +E I  ++F  LF T+ P   QM++   D  A +N
Subjt:  TEEDNGMELIANQYFGKLFQTSDP---QMESIKDDAMAILN

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]2.4e-1841.13Show/hide
Query:  ETWSKYE-ECREIVLGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIW
        + WSK E   R+  L  +++K K I+   +  D  D   + K + +++N+L+D+EI+WKQR+R DWL+ GDKNTK+FH KA++RRK+N+I G++D+ G W
Subjt:  ETWSKYE-ECREIVLGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIW

Query:  TEEDNGMELIANQYFGKLFQTSDP---QMESIKDDAMAILN
        TE+ + +E I  ++F  LF T+ P   QM++   D  A +N
Subjt:  TEEDNGMELIANQYFGKLFQTSDP---QMESIKDDAMAILN

XP_022565089.1 uncharacterized protein LOC111209456 [Brassica napus]2.4e-1830.62Show/hide
Query:  DHRLILADWTIDPLYKKDRAPKKLRRFEETWSKYEECREIVLGAIESKE------------------------------KEIQDLSN------TDDVVDY
        DHRLILAD  I P+    R  +K  +F++ W   EE R+++L   +S +                              K +++L         DD    
Subjt:  DHRLILADWTIDPLYKKDRAPKKLRRFEETWSKYEECREIVLGAIESKE------------------------------KEIQDLSN------TDDVVDY

Query:  NAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDPQMESIKDDAMAIL
          I    KEL + L+ +E++WKQ++R  WL  GDKNTK+FH     RR RNKI  L+D+ G   E++ G+  IA  YF K+F++S+P  + I+D   A+ 
Subjt:  NAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDPQMESIKDDAMAIL

Query:  NTPISSTWEKADSITHLLWQCKFTKGMWTKHFPYSVFDPRNFDGRVGWTAPDYCERMW
          P S T    D++T L+ + +    ++  H       P    G  G TA  Y ++ W
Subjt:  NTPISSTWEKADSITHLLWQCKFTKGMWTKHFPYSVFDPRNFDGRVGWTAPDYCERMW

XP_030940187.1 uncharacterized protein LOC115965136 [Quercus lobata]8.4e-1938.69Show/hide
Query:  KKDRAPKKLRRFEETWSKYEECREIVLGAIESKEKEIQDLSNTDDVVD-YNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKR
        ++ +  KK   FE  W++ ++CR++V  A + K + +Q L   + + D  + I   KKE+   L  +E+ W QR+R  W++WGD+NTK+FH  AN RR R
Subjt:  KKDRAPKKLRRFEETWSKYEECREIVLGAIESKEKEIQDLSNTDDVVD-YNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKR

Query:  NKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDP
        N I GL+D  GIW E+   ME I   YF  +F++++P
Subjt:  NKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDP

TrEMBL top hitse value%identityAlignment
A0A2N9GPZ7 Reverse transcriptase domain-containing protein2.9e-1733.17Show/hide
Query:  LLLQSSSSCPNSIDHRLILADWTIDPLYKKDRAPKKLRRFEETWSKYEECREIV---------------------------------------LGAIESK
        L +Q+S  CP       IL D    PL K+    KKL RFE  W K E+CRE++                                         +I+ K
Subjt:  LLLQSSSSCPNSIDHRLILADWTIDPLYKKDRAPKKLRRFEETWSKYEECREIV---------------------------------------LGAIESK

Query:  EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQT
         +++Q L N         I + + +L  LLE +EI+W+QR+R  W+  GDKNTK+FH + N RR+ N I GL D  G+W  E   +  IA  YF  +F +
Subjt:  EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQT

Query:  SDPQMESI
        S+P  ESI
Subjt:  SDPQMESI

A0A803NGM9 Uncharacterized protein2.9e-1741.82Show/hide
Query:  EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQT
        +K I  LS+  D   +  +   +K+L  +LE DE YW+QR+R  WL+W D NTK+FH KA++RRK+N+I+GLMD  GIW  +   +  +   Y+G LF  
Subjt:  EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQT

Query:  SDPQMESIKD
        S P M+ +++
Subjt:  SDPQMESIKD

A0A803PV25 Uncharacterized protein9.1e-1931.6Show/hide
Query:  DHRLILADWTIDPLYKKDRAPKKLRR----FEETWSKYEECREIV------------LGA--------------------------IESKEKEIQDLSNT
        DHR ++ D  I      D+  K  R+    FEE W + EEC EIV            +G+                          +E  +K + +L+  
Subjt:  DHRLILADWTIDPLYKKDRAPKKLRR----FEETWSKYEECREIV------------LGA--------------------------IESKEKEIQDLSNT

Query:  DDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDPQMESIKD
             +  I + + +L  LLE DE YW+QR+R  WL+WGD+NTK+FH KA++RRK+N+I+GL D +G+W ++   +  I   Y+ KLF +SD   ES+ +
Subjt:  DDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTSDPQMESIKD

Query:  DAMAILNTPISS
        + ++++   +SS
Subjt:  DAMAILNTPISS

A0A803PV25 Uncharacterized protein1.8e-0330.63Show/hide
Query:  FEASNLVQSEVRALDPQSSSWIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAPLPVIRVESDS
        F  SN+ Q    A    ++ W+  + G++ +N DA    G     +  ++RD  GR+ +A  RV+ ++      E  AI DG++      LP   VE+D 
Subjt:  FEASNLVQSEVRALDPQSSSWIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAPLPVIRVESDS

Query:  LQVVNLINNAD
        LQ VNL+   D
Subjt:  LQVVNLINNAD

A0A803PV25 Uncharacterized protein2.6e-1835.97Show/hide
Query:  LGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQY
        L  I  K+ E+Q  SN+     +  I   +KEL++LL ++E YWKQR+RE+WL+ GDKNT++FH +A++ R +N I+GL D LG W  +  G+  + ++Y
Subjt:  LGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQY

Query:  FGKLFQTSDPQMESIKDDAMAILNTPISSTWEKADSITH
        F ++F++S+P +  +  D   +L   +   W + + + H
Subjt:  FGKLFQTSDPQMESIKDDAMAILNTPISSTWEKADSITH

A0A803Q1K6 Uncharacterized protein2.6e-2137.58Show/hide
Query:  DHRLILADWTIDPLYKKDRAPKKLRR--FEETWSKYEECREIVL------------GAIESK--EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIY
        DH+ ++ D  +      +R   KL R  FEE W + E+C+EIV             G  + K  +  +  LS + D   +  + K +K+L  +LE DE+Y
Subjt:  DHRLILADWTIDPLYKKDRAPKKLRR--FEETWSKYEECREIVL------------GAIESK--EKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIY

Query:  WKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTS
        W+QR+R  WL+WGD NTK+FH KA++RRK+N I+GLMD +G+W +E   ++ +   YF  +F+TS
Subjt:  WKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEEDNGMELIANQYFGKLFQTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-0523.53Show/hide
Query:  EKADSITHLLWQCKFTK-------------GMWTKHFPYSVFDPRNFD------GRVGWTAPDYCERMWKGSEARPTTVPLIPVVQPSSRPPSIEAQSSS
        +  +++ HLL++C F +             G WT     +++   N +      G++G   P    R+WK           +         P +  ++  
Subjt:  EKADSITHLLWQCKFTK-------------GMWTKHFPYSVFDPRNFD------GRVGWTAPDYCERMWKGSEARPTTVPLIPVVQPSSRPPSIEAQSSS

Query:  TIETTFEASNLVQSEVRALDPQ-----SSSWIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAP
          E   E S   + E +A  PQ     S  W        + N+DATW     R GIGW++R+ +G ++  G R + R   +   E  A+   V  +    
Subjt:  TIETTFEASNLVQSEVRALDPQ-----SSSWIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAP

Query:  LPVIRVESDSLQVVNLINNAD
           I  ESD+  +VNL+N+ D
Subjt:  LPVIRVESDSLQVVNLINNAD

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-0529.91Show/hide
Query:  WIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAPLPVIRVESDSLQVVNLINNADEDETELRYF
        W P      + N+DATWN   +R GIGW++R+  G +   G R + +   +   E  A+   V  +       +  ESDS  ++ ++NN DE    L+  
Subjt:  WIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAPLPVIRVESDSLQVVNLINNADEDETELRYF

Query:  IKEAQSL
        I++ Q L
Subjt:  IKEAQSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGGATCCTTGTGGGCTTTGGCCGAATCCTACATCTCAAGGAGCAAAGGTGGGAGAATTAAATGATACTGGAGACAAAGAGCACTCATCTAACAAAAATGATAA
AGTCAGAATGTTGGCTGGGAAAGGTAAAAGCTGGAAAAGAGTCCCTAGGCACAAAACAGAAAAGGATAAAGGGGATAAAATGGAAGCTTCTAGTCAACCTCTAGCTGGGG
CTAAACATTCACTGCTACTTCAAAGTTCATCATCTTGCCCGAATAGCATCGATCATAGGCTTATTCTTGCAGATTGGACAATTGATCCGTTGTACAAGAAAGATAGAGCT
CCAAAGAAATTGAGGAGATTTGAAGAAACTTGGAGTAAATATGAAGAATGTAGAGAAATAGTGCTAGGAGCTATTGAGAGTAAGGAGAAAGAGATTCAGGATCTTTCAAA
TACAGATGATGTTGTTGATTATAATGCTATAGGGAAGAAAAAGAAAGAACTTGAAAATTTGTTGGAAGACGATGAGATATACTGGAAGCAACGAGCTCGAGAGGATTGGT
TGGAGTGGGGCGATAAAAACACGAAATGGTTCCACATGAAGGCCAATAGTAGAAGGAAAAGGAACAAAATTCGAGGTCTGATGGATGACCTCGGTATATGGACGGAGGAG
GACAATGGAATGGAATTGATAGCAAACCAATATTTTGGCAAATTATTCCAAACTTCAGATCCACAGATGGAATCAATCAAAGATGATGCAATGGCAATCCTCAATACTCC
CATTAGCTCTACTTGGGAGAAAGCAGATTCCATCACTCACCTGCTTTGGCAGTGCAAATTCACTAAAGGTATGTGGACTAAACATTTCCCCTATTCTGTTTTTGATCCTC
GAAATTTTGATGGCAGGGTTGGATGGACTGCACCTGATTACTGTGAGCGAATGTGGAAGGGAAGCGAGGCAAGACCGACTACTGTACCTTTGATACCTGTTGTGCAACCG
AGTTCTCGTCCTCCATCAATCGAAGCCCAATCGTCTTCTACAATCGAAACCACTTTTGAAGCGTCGAATCTAGTACAATCTGAGGTGCGAGCGCTGGATCCCCAATCGTC
TTCTTGGATTCCCATTCTAGAGGGTACTTGGAGGCTCAACAGTGATGCGACGTGGAACGACGGAGTTCAGCGAGGAGGGATTGGGTGGTTAATCAGAGACTGGAATGGAA
GATTAGTGATGGCGGGATACCGAGTGATTAGTCGACAATGGAAGATTCCATGGCTTGAAGCATTGGCGATCTGTGATGGTGTGAGAATGATCCCTTCGGCGCCTTTACCT
GTCATTCGTGTGGAAAGTGATAGCCTTCAGGTGGTCAATCTGATTAATAACGCTGATGAAGATGAAACAGAACTGAGATACTTCATTAAAGAGGCCCAAAGTTTGGACCA
AGTGTCAACAATTGGGACACCACCAATTGATCTTCCCCGCTATGACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTATCTTGAATGGGAAAAACTCTAGAGAGAAAA
TTCTCTCTAGAGTTCTTGGGTTGAGAGAATATGAGAGGGAGGTTAGAGAGAATGCAATAGTGCATTCTTGTGGCCTTGTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGGATCCTTGTGGGCTTTGGCCGAATCCTACATCTCAAGGAGCAAAGGTGGGAGAATTAAATGATACTGGAGACAAAGAGCACTCATCTAACAAAAATGATAA
AGTCAGAATGTTGGCTGGGAAAGGTAAAAGCTGGAAAAGAGTCCCTAGGCACAAAACAGAAAAGGATAAAGGGGATAAAATGGAAGCTTCTAGTCAACCTCTAGCTGGGG
CTAAACATTCACTGCTACTTCAAAGTTCATCATCTTGCCCGAATAGCATCGATCATAGGCTTATTCTTGCAGATTGGACAATTGATCCGTTGTACAAGAAAGATAGAGCT
CCAAAGAAATTGAGGAGATTTGAAGAAACTTGGAGTAAATATGAAGAATGTAGAGAAATAGTGCTAGGAGCTATTGAGAGTAAGGAGAAAGAGATTCAGGATCTTTCAAA
TACAGATGATGTTGTTGATTATAATGCTATAGGGAAGAAAAAGAAAGAACTTGAAAATTTGTTGGAAGACGATGAGATATACTGGAAGCAACGAGCTCGAGAGGATTGGT
TGGAGTGGGGCGATAAAAACACGAAATGGTTCCACATGAAGGCCAATAGTAGAAGGAAAAGGAACAAAATTCGAGGTCTGATGGATGACCTCGGTATATGGACGGAGGAG
GACAATGGAATGGAATTGATAGCAAACCAATATTTTGGCAAATTATTCCAAACTTCAGATCCACAGATGGAATCAATCAAAGATGATGCAATGGCAATCCTCAATACTCC
CATTAGCTCTACTTGGGAGAAAGCAGATTCCATCACTCACCTGCTTTGGCAGTGCAAATTCACTAAAGGTATGTGGACTAAACATTTCCCCTATTCTGTTTTTGATCCTC
GAAATTTTGATGGCAGGGTTGGATGGACTGCACCTGATTACTGTGAGCGAATGTGGAAGGGAAGCGAGGCAAGACCGACTACTGTACCTTTGATACCTGTTGTGCAACCG
AGTTCTCGTCCTCCATCAATCGAAGCCCAATCGTCTTCTACAATCGAAACCACTTTTGAAGCGTCGAATCTAGTACAATCTGAGGTGCGAGCGCTGGATCCCCAATCGTC
TTCTTGGATTCCCATTCTAGAGGGTACTTGGAGGCTCAACAGTGATGCGACGTGGAACGACGGAGTTCAGCGAGGAGGGATTGGGTGGTTAATCAGAGACTGGAATGGAA
GATTAGTGATGGCGGGATACCGAGTGATTAGTCGACAATGGAAGATTCCATGGCTTGAAGCATTGGCGATCTGTGATGGTGTGAGAATGATCCCTTCGGCGCCTTTACCT
GTCATTCGTGTGGAAAGTGATAGCCTTCAGGTGGTCAATCTGATTAATAACGCTGATGAAGATGAAACAGAACTGAGATACTTCATTAAAGAGGCCCAAAGTTTGGACCA
AGTGTCAACAATTGGGACACCACCAATTGATCTTCCCCGCTATGACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTATCTTGAATGGGAAAAACTCTAGAGAGAAAA
TTCTCTCTAGAGTTCTTGGGTTGAGAGAATATGAGAGGGAGGTTAGAGAGAATGCAATAGTGCATTCTTGTGGCCTTGTGTTGTAG
Protein sequenceShow/hide protein sequence
MEVDPCGLWPNPTSQGAKVGELNDTGDKEHSSNKNDKVRMLAGKGKSWKRVPRHKTEKDKGDKMEASSQPLAGAKHSLLLQSSSSCPNSIDHRLILADWTIDPLYKKDRA
PKKLRRFEETWSKYEECREIVLGAIESKEKEIQDLSNTDDVVDYNAIGKKKKELENLLEDDEIYWKQRAREDWLEWGDKNTKWFHMKANSRRKRNKIRGLMDDLGIWTEE
DNGMELIANQYFGKLFQTSDPQMESIKDDAMAILNTPISSTWEKADSITHLLWQCKFTKGMWTKHFPYSVFDPRNFDGRVGWTAPDYCERMWKGSEARPTTVPLIPVVQP
SSRPPSIEAQSSSTIETTFEASNLVQSEVRALDPQSSSWIPILEGTWRLNSDATWNDGVQRGGIGWLIRDWNGRLVMAGYRVISRQWKIPWLEALAICDGVRMIPSAPLP
VIRVESDSLQVVNLINNADEDETELRYFIKEAQSLDQVSTIGTPPIDLPRYDSEIRNVVVGLPILNGKNSREKILSRVLGLREYEREVRENAIVHSCGLVL