; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010589 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010589
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein sym-1
Genome locationscaffold5:11612958..11614847
RNA-Seq ExpressionSpg010589
SyntenySpg010589
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443214.1 PREDICTED: protein SYM1 [Cucumis melo]4.8e-4778.57Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTR + NGG    FGLQAP LETPVQM+G   CS RH+H LEF DVGRRQMQCGSLRFT+FRISASSGDGSGDGFGSG GDGG+G
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD GK G+NWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

XP_011652163.1 protein sym-1 [Cucumis sativus]2.4e-4677.78Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTR + NGGPT  F LQAP L T VQM+G   CS RH+H LEF DVGRRQ QCG LRFT+FRISASSGDGSGDGFGSG GDGGYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD GKGG+NWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

XP_022971452.1 protein SYM1-like [Cucurbita maxima]4.0e-4680.16Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MV  G TLSL+ PPLCTR T NGGP+LRFGLQA SL+TPVQ++G HACS  HSH LEFK VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGG  GYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYG E++GG EGD GKGGDNWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

XP_023539960.1 protein sym-1-like [Cucurbita pepo subsp. pepo]9.0e-4681.15Show/hide
Query:  GITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGH
        G TLSL+ PPLCTR T NGGP+LRFGLQ  SLETPVQ++G HACS  HSH LEFK VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGG  GYGGYG 
Subjt:  GITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGH

Query:  ENNGGSEGDGGKGGDNWSFLTW
        E++GG EGD GKGGDNWSFL+W
Subjt:  ENNGGSEGDGGKGGDNWSFLTW

XP_038903823.1 protein sym-1 [Benincasa hispida]9.6e-4880.95Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTRF  NGGP   FGLQAP L TPVQM+G   CS RH+H LEF DVGRRQMQ GSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD  KGGDNWS L+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

TrEMBL top hitse value%identityAlignment
A0A0A0LC77 Uncharacterized protein1.1e-4677.78Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTR + NGGPT  F LQAP L T VQM+G   CS RH+H LEF DVGRRQ QCG LRFT+FRISASSGDGSGDGFGSG GDGGYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD GKGG+NWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

A0A1S3B718 protein SYM12.3e-4778.57Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTR + NGG    FGLQAP LETPVQM+G   CS RH+H LEF DVGRRQMQCGSLRFT+FRISASSGDGSGDGFGSG GDGG+G
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD GK G+NWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

A0A5D3DPM1 Protein SYM12.3e-4778.57Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MVPCG+TLSLKPP LCTR + NGG    FGLQAP LETPVQM+G   CS RH+H LEF DVGRRQMQCGSLRFT+FRISASSGDGSGDGFGSG GDGG+G
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYGHEN+GG EGD GK G+NWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

A0A6J1DGH9 protein sym-14.8e-4579.37Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MV CG+TLSLKPPPLCTR +SN GPTL FGLQAPSLETPVQM+G  ACS RH+H LEF+D+GR QMQCGSLRFTN RISASSGDGSG G GSGGGDGGYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        G   EN GG EGDGGKGG +WSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

A0A6J1I1Z8 protein SYM1-like2.0e-4680.16Show/hide
Query:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG
        MV  G TLSL+ PPLCTR T NGGP+LRFGLQA SL+TPVQ++G HACS  HSH LEFK VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGG  GYG
Subjt:  MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYG

Query:  GYGHENNGGSEGDGGKGGDNWSFLTW
        GYG E++GG EGD GKGGDNWSFL+W
Subjt:  GYGHENNGGSEGDGGKGGDNWSFLTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCTGTGGCATCACTCTTTCTCTGAAACCTCCTCCTCTTTGCACTCGCTTCACCTCCAATGGCGGACCCACCTTACGTTTCGGCCTCCAAGCTCCAAGTCTTGA
AACCCCAGTTCAAATGAGGGGGAATCATGCCTGTTCTTTACGCCACAGTCATTGCTTGGAGTTTAAGGATGTGGGTCGGCGTCAAATGCAATGTGGGTCGCTGAGATTTA
CGAATTTCCGGATTTCAGCATCCTCTGGCGATGGTTCTGGCGACGGCTTTGGCTCTGGAGGTGGTGATGGTGGATATGGAGGTTATGGTCATGAAAATAATGGAGGCAGT
GAAGGGGATGGTGGCAAAGGCGGGGATAACTGGTCCTTCTTAACTTGGTGTGGATGGTTGGAAGCAGTACACCTTTTGCAGAAGTTTGAAGATGAGATCGTGGATGAAGT
TAAAGAAGAGAAAGACAAAAGGTTGGGTGGTGGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCCTGTGGCATCACTCTTTCTCTGAAACCTCCTCCTCTTTGCACTCGCTTCACCTCCAATGGCGGACCCACCTTACGTTTCGGCCTCCAAGCTCCAAGTCTTGA
AACCCCAGTTCAAATGAGGGGGAATCATGCCTGTTCTTTACGCCACAGTCATTGCTTGGAGTTTAAGGATGTGGGTCGGCGTCAAATGCAATGTGGGTCGCTGAGATTTA
CGAATTTCCGGATTTCAGCATCCTCTGGCGATGGTTCTGGCGACGGCTTTGGCTCTGGAGGTGGTGATGGTGGATATGGAGGTTATGGTCATGAAAATAATGGAGGCAGT
GAAGGGGATGGTGGCAAAGGCGGGGATAACTGGTCCTTCTTAACTTGGTGTGGATGGTTGGAAGCAGTACACCTTTTGCAGAAGTTTGAAGATGAGATCGTGGATGAAGT
TAAAGAAGAGAAAGACAAAAGGTTGGGTGGTGGAAATTGA
Protein sequenceShow/hide protein sequence
MVPCGITLSLKPPPLCTRFTSNGGPTLRFGLQAPSLETPVQMRGNHACSLRHSHCLEFKDVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGHENNGGS
EGDGGKGGDNWSFLTWCGWLEAVHLLQKFEDEIVDEVKEEKDKRLGGGN