; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010607 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010607
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold5:12406418..12410202
RNA-Seq ExpressionSpg010607
SyntenySpg010607
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]1.8e-3425.84Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        SQ K   IE+++EGWT V RRKK+K +  +KE   +R+ ++  K+Q+ K K+K+R+ K + EE +DF    + +TLA++FP RFL D Q E    V CH 
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPASSSER-----------------WQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRC---------------------------------
        ++ +E++++P  S E                     E    L+   +      S++P   Y     C                                 
Subjt:  VDVVEDDDVPASSSER-----------------WQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRC---------------------------------

Query:  --------------------------------------KKGES--VGFYALKLVDMD---------------YGLLSMR---------------------
                                               +G    +G   L+L+  D               Y LL  R                     
Subjt:  --------------------------------------KKGES--VGFYALKLVDMD---------------YGLLSMR---------------------

Query:  ---------------------DCPLICTGESGLFADSISLPFWG---------------QDRVGSWERSLARWNSLLPDIRVS------RGPLGPTGSSI
                             D       +S   A S+ +P                  Q R+G++    +  ++     R          P G     I
Subjt:  ---------------------DCPLICTGESGLFADSISLPFWG---------------QDRVGSWERSLARWNSLLPDIRVS------RGPLGPTGSSI

Query:  GVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYK
         VL +  +  L++ +  +  +  T       K+ LP +RTKDGFDPKAY                                KLL+EG+ +P +RKGLGYK
Subjt:  GVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYK

Query:  SPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFST
        SPEPIRI R+GK KV D+NHITV++VD  +E E   QRTS F  I P V R  VF+RLS+ E E +  Q T++  R SVF+RL++   EE+    T
Subjt:  SPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFST

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.6e-3828.91Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---
        SQ K   IE+++EGWT V RRKK+K +  +KES L+ + +R  K+Q+ K K+K+R+ K + E+ +DF    + +TLA++FP RFL D Q E    V    
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---

Query:  --------------CHIVDVVEDD----------------------------------------------------------------------------
                      C  +D  ++D                                                                            
Subjt:  --------------CHIVDVVEDD----------------------------------------------------------------------------

Query:  -----------DVPASSSE---------------------RWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRD
                   +VP  + E                       + EASTS  K  +V DEK SN PILRYVPLSR KKGES        V+   GL     
Subjt:  -----------DVPASSSE---------------------RWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRD

Query:  CPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDG
              G+  +  +S + P                                       +  +E  + L+E S                   LP +RTKDG
Subjt:  CPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDG

Query:  FDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFR
        FDPKAY                                KLL+EG+++P +RKGLGYK PEPIRI R+GK KV D+NHITV++VD  +EKE   QRTS F 
Subjt:  FDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFR

Query:  CIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST
         + P V RA VF+RLS+ E E +  Q T+S  R S F+RL+M    E+ +
Subjt:  CIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-3427.8Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        SQ K   IE+++E WT V RRKK+K +  +KE   +R+ +R  K+Q+ K K+K+R+ K + +E +DF    + ITLA++FP RFL D Q E    V CH 
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPASSSERWQGEASTS-------LVKPKVVK----------------------------------------DEKCSNSPI------------
        ++  E++ +P  S E  +     S       L  P+ +K                                          K  N P+            
Subjt:  VDVVEDDDVPASSSERWQGEASTS-------LVKPKVVK----------------------------------------DEKCSNSPI------------

Query:  ---------LRYVPLSRCK--------------------KGESVGFYALKLVDMDYGLLS-----MRDCPLICTGESGLFADSISLPFWGQD--------
                 +  +P S  +                    +G       +K V+ D    S       D       +S     S+ +P   ++        
Subjt:  ---------LRYVPLSRCK--------------------KGESVGFYALKLVDMDYGLLS-----MRDCPLICTGESGLFADSISLPFWGQD--------

Query:  -------RVGSW--ERSLARWN---------------SLLPDIRVSRGPLG-------PTGSSIG---VLSKERVLRLLEFSAIQRNLGETFKNFYKDKS
                +G++  E+S A  +               S+L  + +SR   G       P G  +G   VL +     L + +  +  +  T       ++
Subjt:  -------RVGSW--ERSLARWN---------------SLLPDIRVSRGPLG-------PTGSSIG---VLSKERVLRLLEFSAIQRNLGETFKNFYKDKS

Query:  DLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKE
         LP +RTKD FDPKAY                                KLL+EG+++P +RKGLGYK PEPIRI R+GK K+ D+NHITV++VD  KEKE
Subjt:  DLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKE

Query:  SVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTP--NKLFKG
           QRTS F  I P V RA VF+RLSV E E +  Q T++  R S F RLS+   +   T   P  N+L  G
Subjt:  SVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTP--NKLFKG

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.4e-3334.41Show/hide
Query:  DDSQGEALETVTCHIVDVVEDDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESG
        D+SQ ++L T   H           A +    +GEA TS  K  ++KDE  +N+P+LRYVPLSR KKGES        ++   GL           G+  
Subjt:  DDSQGEALETVTCHIVDVVEDDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESG

Query:  LFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY----
        +  +S + P                                       +  +E  + L+E                   ++LP +RTKDGFDPKAY    
Subjt:  LFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY----

Query:  ----------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRAL
                                    KLL+EG+S+P +RKGLGYKSPEPIRI ++GK KV D NHIT+E+ D++  KE  +QR SVF  IRP V R +
Subjt:  ----------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRAL

Query:  VFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST
        VF+RLS+ E E E  Q   S  R SVFRRL+    +EEST
Subjt:  VFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.5e-0935.09Show/hide
Query:  QGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIV
        QG+   IE+++EGW  V  RKK++    ++ES  +++ +R  K+Q+ K K+K+ + K +  E  +F  P + +TLA++ P+ FL D Q E  E V CH +
Subjt:  QGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIV

Query:  DVVEDDDVPASSSE
        +  E++ +P  S E
Subjt:  DVVEDDDVPASSSE

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]7.7e-3334.12Show/hide
Query:  DDSQGEALETVTCHIVDVVEDDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESG
        D+SQ ++L T   H           A +    +GEA TS  K  ++KDE  +N+P+LRYVPLSR KKGES        ++   GL           G+  
Subjt:  DDSQGEALETVTCHIVDVVEDDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESG

Query:  LFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY----
        +  +S + P                                       +  +E  + L+E                   ++LP +RTKDGFDPKAY    
Subjt:  LFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY----

Query:  ----------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRAL
                                    KLL+EG+S+P +RKGLGYKSPEPIRI ++GK KV D NHIT+E+ D++  KE  +QR SVF  IRP V R +
Subjt:  ----------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRAL

Query:  VFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST
        VF+RLS+ E E E  Q   +  R SVFRRL+    +EEST
Subjt:  VFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein3.7e-3338.81Show/hide
Query:  DDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESGLFADSISLPFWGQDRVGSWE
        D+   A S E   G+ASTS  K  ++ DEK SN PILRYVPLSRCKKGES        V    GL           G+  +  +S + PF    ++   E
Subjt:  DDDVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESGLFADSISLPFWGQDRVGSWE

Query:  RSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAYKLLKEGYSLPTTRKGLGYKSPEPI
          +    + LP      G   P                     +   +G  F    + KS    ++ K     K  KLL+EG+++P +RKGLGYKSPEPI
Subjt:  RSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAYKLLKEGYSLPTTRKGLGYKSPEPI

Query:  RIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEE
        RI R+GK KV D NHITV++VD  KEKE   QRTS F  I P V R  VF+RLS+ E E +  Q T++  R S F+RL+M   +E+
Subjt:  RIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEE

A0A5A7TJZ7 Retrotransposon gag protein1.4e+0034.83Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQ
        S+ K  SIE+++EGW  V RRKK+K +  +KES  +R+ +R  K+++ K K+K+++ K   E      C     T  E  P R L++ +
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQ

A0A5A7TJZ7 Retrotransposon gag protein7.0e-3235.05Show/hide
Query:  QGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPD
        + EAST+  K  ++ DEK SN PILRYVPLSR KKGES        V+   GL           GE  +  +S + P                       
Subjt:  QGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPD

Query:  IRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLK
                        +  +E  + L E S                   LP +RTKDGFDPKAY                                KLL+
Subjt:  IRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLK

Query:  EGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSM
        EG+ +P +RKGLGYKSPEPIRI R+GK KV D+NHIT+++ D  +EKE   QRTS F  I P V RA VF++LS+ E E +  Q T++  R S F+RL++
Subjt:  EGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSM

Query:  PIGEEESTFST
           EE+    T
Subjt:  PIGEEESTFST

A0A5D3BSG5 Uncharacterized protein8.9e-3525.84Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        SQ K   IE+++EGWT V RRKK+K +  +KE   +R+ ++  K+Q+ K K+K+R+ K + EE +DF    + +TLA++FP RFL D Q E    V CH 
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPASSSER-----------------WQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRC---------------------------------
        ++ +E++++P  S E                     E    L+   +      S++P   Y     C                                 
Subjt:  VDVVEDDDVPASSSER-----------------WQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRC---------------------------------

Query:  --------------------------------------KKGES--VGFYALKLVDMD---------------YGLLSMR---------------------
                                               +G    +G   L+L+  D               Y LL  R                     
Subjt:  --------------------------------------KKGES--VGFYALKLVDMD---------------YGLLSMR---------------------

Query:  ---------------------DCPLICTGESGLFADSISLPFWG---------------QDRVGSWERSLARWNSLLPDIRVS------RGPLGPTGSSI
                             D       +S   A S+ +P                  Q R+G++    +  ++     R          P G     I
Subjt:  ---------------------DCPLICTGESGLFADSISLPFWG---------------QDRVGSWERSLARWNSLLPDIRVS------RGPLGPTGSSI

Query:  GVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYK
         VL +  +  L++ +  +  +  T       K+ LP +RTKDGFDPKAY                                KLL+EG+ +P +RKGLGYK
Subjt:  GVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYK

Query:  SPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFST
        SPEPIRI R+GK KV D+NHITV++VD  +E E   QRTS F  I P V R  VF+RLS+ E E +  Q T++  R SVF+RL++   EE+    T
Subjt:  SPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFST

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.7e-3828.91Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---
        SQ K   IE+++EGWT V RRKK+K +  +KES L+ + +R  K+Q+ K K+K+R+ K + E+ +DF    + +TLA++FP RFL D Q E    V    
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT---

Query:  --------------CHIVDVVEDD----------------------------------------------------------------------------
                      C  +D  ++D                                                                            
Subjt:  --------------CHIVDVVEDD----------------------------------------------------------------------------

Query:  -----------DVPASSSE---------------------RWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRD
                   +VP  + E                       + EASTS  K  +V DEK SN PILRYVPLSR KKGES        V+   GL     
Subjt:  -----------DVPASSSE---------------------RWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRD

Query:  CPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDG
              G+  +  +S + P                                       +  +E  + L+E S                   LP +RTKDG
Subjt:  CPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPDIRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDG

Query:  FDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFR
        FDPKAY                                KLL+EG+++P +RKGLGYK PEPIRI R+GK KV D+NHITV++VD  +EKE   QRTS F 
Subjt:  FDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKESVDQRTSVFR

Query:  CIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST
         + P V RA VF+RLS+ E E +  Q T+S  R S F+RL+M    E+ +
Subjt:  CIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEEST

A0A5D3C0W6 Ty3-gypsy retrotransposon protein2.0e-3427.8Show/hide
Query:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        SQ K   IE+++E WT V RRKK+K +  +KE   +R+ +R  K+Q+ K K+K+R+ K + +E +DF    + ITLA++FP RFL D Q E    V CH 
Subjt:  SQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPASSSERWQGEASTS-------LVKPKVVK----------------------------------------DEKCSNSPI------------
        ++  E++ +P  S E  +     S       L  P+ +K                                          K  N P+            
Subjt:  VDVVEDDDVPASSSERWQGEASTS-------LVKPKVVK----------------------------------------DEKCSNSPI------------

Query:  ---------LRYVPLSRCK--------------------KGESVGFYALKLVDMDYGLLS-----MRDCPLICTGESGLFADSISLPFWGQD--------
                 +  +P S  +                    +G       +K V+ D    S       D       +S     S+ +P   ++        
Subjt:  ---------LRYVPLSRCK--------------------KGESVGFYALKLVDMDYGLLS-----MRDCPLICTGESGLFADSISLPFWGQD--------

Query:  -------RVGSW--ERSLARWN---------------SLLPDIRVSRGPLG-------PTGSSIG---VLSKERVLRLLEFSAIQRNLGETFKNFYKDKS
                +G++  E+S A  +               S+L  + +SR   G       P G  +G   VL +     L + +  +  +  T       ++
Subjt:  -------RVGSW--ERSLARWN---------------SLLPDIRVSRGPLG-------PTGSSIG---VLSKERVLRLLEFSAIQRNLGETFKNFYKDKS

Query:  DLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKE
         LP +RTKD FDPKAY                                KLL+EG+++P +RKGLGYK PEPIRI R+GK K+ D+NHITV++VD  KEKE
Subjt:  DLPDKRTKDGFDPKAY--------------------------------KLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVDDSKEKE

Query:  SVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTP--NKLFKG
           QRTS F  I P V RA VF+RLSV E E +  Q T++  R S F RLS+   +   T   P  N+L  G
Subjt:  SVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTP--NKLFKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCAAGGAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCTTTGTTGTTCGTCGCAAAAAGAAAAAGCAAAGTTACGCACGGAAAGAGTCCTG
CCTATTTCGAGACAATAAAAGAAAGACTAAGTCTCAAAGGAAGAAAGGAAAAAGGAAGTCAAGGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTTTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTCCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACCTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGCTCCTCGGAACGGTGGCAGGGTGAAGCGTCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATA
CGTTCCCTTATCTAGATGTAAAAAGGGTGAATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATATGGATTATGGACTCCTGTCCATGAGGGATTGTCCTTTGATTTGTA
CCGGTGAGAGTGGCCTGTTCGCCGACTCGATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACGTAGTCTTGCAAGATGGAATTCACTCCTTCCCGAT
ATTAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCCATTGGGGTGTTGAGCAAAGAAAGGGTTCTAAGGCTGCTGGAATTTTCTGCTATTCAAAGGAATTTAGG
CGAAACGTTCAAGAATTTCTACAAGGATAAAAGTGACTTGCCTGACAAGCGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAAAGGAAGGTTATAGTCTGC
CTACAACGAGAAAAGGACTGGGATATAAGTCGCCTGAGCCAATTCGCATAATAAGAAGAGGGAAGGCGAAAGTGACAGATACAAATCATATAACAGTAGAAAAGGTTGAT
GACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGTGCATCAGGCCACCAGTTACTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAACGAAACGGA
AGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCGGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACATTTTCAACTCCGAATAAGCTTT
TCAAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCAAGGAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCTTTGTTGTTCGTCGCAAAAAGAAAAAGCAAAGTTACGCACGGAAAGAGTCCTG
CCTATTTCGAGACAATAAAAGAAAGACTAAGTCTCAAAGGAAGAAAGGAAAAAGGAAGTCAAGGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTTTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTCCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACCTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGCTCCTCGGAACGGTGGCAGGGTGAAGCGTCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATA
CGTTCCCTTATCTAGATGTAAAAAGGGTGAATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATATGGATTATGGACTCCTGTCCATGAGGGATTGTCCTTTGATTTGTA
CCGGTGAGAGTGGCCTGTTCGCCGACTCGATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACGTAGTCTTGCAAGATGGAATTCACTCCTTCCCGAT
ATTAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCCATTGGGGTGTTGAGCAAAGAAAGGGTTCTAAGGCTGCTGGAATTTTCTGCTATTCAAAGGAATTTAGG
CGAAACGTTCAAGAATTTCTACAAGGATAAAAGTGACTTGCCTGACAAGCGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAAAGGAAGGTTATAGTCTGC
CTACAACGAGAAAAGGACTGGGATATAAGTCGCCTGAGCCAATTCGCATAATAAGAAGAGGGAAGGCGAAAGTGACAGATACAAATCATATAACAGTAGAAAAGGTTGAT
GACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGTGCATCAGGCCACCAGTTACTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAACGAAACGGA
AGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCGGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACATTTTCAACTCCGAATAAGCTTT
TCAAAGGTTAA
Protein sequenceShow/hide protein sequence
MKGSQGKYVSIEDENEGWTFVVRRKKKKQSYARKESCLFRDNKRKTKSQRKKGKRKSRRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
DVPASSSERWQGEASTSLVKPKVVKDEKCSNSPILRYVPLSRCKKGESVGFYALKLVDMDYGLLSMRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLARWNSLLPD
IRVSRGPLGPTGSSIGVLSKERVLRLLEFSAIQRNLGETFKNFYKDKSDLPDKRTKDGFDPKAYKLLKEGYSLPTTRKGLGYKSPEPIRIIRRGKAKVTDTNHITVEKVD
DSKEKESVDQRTSVFRCIRPPVTRALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTPNKLFKG