; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010609 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010609
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:12120246..12124172
RNA-Seq ExpressionSpg010609
SyntenySpg010609
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.7e-0427.07Show/hide
Query:  PYWGPLGPPASSKMKTLEEKEAKRRRRQQRAEVEEVVQKVVEDIATKVVEEENPKEPEEQNLGQQDPIVESTQEVQEKQTEDVQERGNKQEVQEQEARVE
        P  G +  P S+K  T+   E       + A  EE+V      +A  VV EE   E     L  + P V +  +  +K +  V E     EV  +E   +
Subjt:  PYWGPLGPPASSKMKTLEEKEAKRRRRQQRAEVEEVVQKVVEDIATKVVEEENPKEPEEQNLGQQDPIVESTQEVQEKQTEDVQERGNKQEVQEQEARVE

Query:  VVMLEVPHRRRKQKVGHVKVVRTDTPSPPTTDSEKENTEKEEREKKEAEDKAREETEKKMEEEILPKQKEDKGKGIAEASADVEDIETEEPRLPYNRFIN
        + ++E   +++K K         +         EKE  E+E+ +K+E E + +EE EKK E      QK+ KGK +AE   + +  E E+ +    R   
Subjt:  VVMLEVPHRRRKQKVGHVKVVRTDTPSPPTTDSEKENTEKEEREKKEAEDKAREETEKKMEEEILPKQKEDKGKGIAEASADVEDIETEEPRLPYNRFIN

Query:  NLARAKYIE------MLKRDFLFERGFGDDLPRFLRTGIANHGWSQFYAKPELVNSNIVRFNEMVVAPSNDQLNAAVMEVGIEGAQW--RLTKTEKRQAA
           + K IE       + RDF   R  G      L+    +          ++ ++     N+++  P+  Q+  A+  +   G +W   L       + 
Subjt:  NLARAKYIE------MLKRDFLFERGFGDDLPRFLRTGIANHGWSQFYAKPELVNSNIVRFNEMVVAPSNDQLNAAVMEVGIEGAQW--RLTKTEKRQAA

Query:  YLKSEANTWMGFIKFRLLSTTHDSTVSRDWVLLVFAILRSMSIDVGKIISR
         L  E   W+  +K RL+STTHD TVSRD V+  + I+RS+ IDVG++I+R
Subjt:  YLKSEANTWMGFIKFRLLSTTHDSTVSRDWVLLVFAILRSMSIDVGKIISR

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGTGCCCACAATTGGAGATACAGATTAGCGGAGCAAAGAGTAGAAGTTGCAGATTTGTGCCCACATTTGGTCCTGAGAATGTGGAATTTGCGTTTGTTGTCAA
GGCAATTGCGGGTGCAACTGAAGGATGCTATCTGCACCATGTCTATGTGGGCAACATAGATAGTATTCTTCAGCTGGCTGTGATGTCTGAGGATAATGTTGGGTACCTTA
TCCTGGTGACACTATGTGATACGACCCACTGTGTATTCGATACAGATGCACTGGTCCAAAGCATCCATGGGCAAGACCGAGTGGGGACTGGGAACATAACAGTAAAAGAT
GGAATTCACTTCTTCCCCTATTGGGGTCCATTAGGTCCACCTGCTAGCTCGAAAATGAAGACGTTGGAGGAAAAAGAAGCCAAGAGAAGGAGGCGGCAACAAAGGGCTGA
GGTTGAAGAAGTAGTACAGAAAGTAGTGGAAGATATTGCTACTAAGGTGGTTGAGGAAGAGAATCCGAAGGAACCAGAGGAACAGAATCTTGGACAGCAGGATCCGATAG
TTGAAAGTACGCAAGAAGTTCAAGAAAAACAAACAGAAGATGTGCAGGAAAGAGGCAACAAACAGGAGGTGCAAGAGCAAGAGGCTCGAGTCGAAGTCGTTATGCTGGAG
GTTCCGCATCGCCGTCGGAAGCAGAAAGTCGGCCATGTCAAGGTCGTCCGGACGGATACTCCTTCGCCGCCGACAACTGATTCTGAGAAAGAGAATACGGAAAAAGAAGA
GCGGGAGAAAAAAGAGGCAGAAGATAAAGCAAGAGAAGAGACAGAAAAGAAAATGGAGGAGGAAATTTTGCCCAAACAGAAGGAAGACAAGGGCAAGGGTATTGCTGAAG
CATCGGCTGACGTTGAAGATATCGAAACTGAAGAGCCACGGTTGCCATACAATCGCTTCATCAATAATCTTGCCCGAGCAAAGTATATAGAGATGCTAAAAAGAGACTTT
TTGTTTGAACGGGGATTTGGTGATGATCTGCCGCGTTTCTTGAGAACAGGAATAGCGAACCATGGCTGGAGTCAGTTCTACGCAAAGCCGGAACTGGTCAATTCCAATAT
TGTCCGTTTCAACGAGATGGTGGTAGCACCATCGAATGATCAGTTAAATGCAGCTGTCATGGAGGTTGGTATCGAGGGGGCTCAGTGGAGACTGACGAAGACAGAAAAGC
GCCAAGCGGCTTATCTGAAGAGCGAAGCCAATACATGGATGGGCTTCATCAAGTTCCGCTTACTGTCGACAACTCACGATTCAACGGTGTCTCGCGATTGGGTGCTGTTG
GTATTTGCTATTCTTCGTTCCATGAGCATTGATGTGGGCAAAATAATCTCTAGGGTTCCAATGAATACGGATGATGTCACTCTAATAGACAGAGGAATAATCAACACGCC
GAACTTGGCTAGACTTCAAAGGACGCAAGAAGCATGCCAAGGCAGTTTGGTGTGCGGCATCCATCAAATGCAGGAGAAATTACAGATGCATTCCAGCCGGATGGAATTTG
CTGAAAAGCAATTCCAAACCTTCTGGAATTATGTGAAGAGAAGGGATGCCGCGTTGAGGGGACCCTGCAATCTAATTTTTCTAAACCATATCCGGCCTTCCCGATATTCC
CTAATGACTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGTGCCCACAATTGGAGATACAGATTAGCGGAGCAAAGAGTAGAAGTTGCAGATTTGTGCCCACATTTGGTCCTGAGAATGTGGAATTTGCGTTTGTTGTCAA
GGCAATTGCGGGTGCAACTGAAGGATGCTATCTGCACCATGTCTATGTGGGCAACATAGATAGTATTCTTCAGCTGGCTGTGATGTCTGAGGATAATGTTGGGTACCTTA
TCCTGGTGACACTATGTGATACGACCCACTGTGTATTCGATACAGATGCACTGGTCCAAAGCATCCATGGGCAAGACCGAGTGGGGACTGGGAACATAACAGTAAAAGAT
GGAATTCACTTCTTCCCCTATTGGGGTCCATTAGGTCCACCTGCTAGCTCGAAAATGAAGACGTTGGAGGAAAAAGAAGCCAAGAGAAGGAGGCGGCAACAAAGGGCTGA
GGTTGAAGAAGTAGTACAGAAAGTAGTGGAAGATATTGCTACTAAGGTGGTTGAGGAAGAGAATCCGAAGGAACCAGAGGAACAGAATCTTGGACAGCAGGATCCGATAG
TTGAAAGTACGCAAGAAGTTCAAGAAAAACAAACAGAAGATGTGCAGGAAAGAGGCAACAAACAGGAGGTGCAAGAGCAAGAGGCTCGAGTCGAAGTCGTTATGCTGGAG
GTTCCGCATCGCCGTCGGAAGCAGAAAGTCGGCCATGTCAAGGTCGTCCGGACGGATACTCCTTCGCCGCCGACAACTGATTCTGAGAAAGAGAATACGGAAAAAGAAGA
GCGGGAGAAAAAAGAGGCAGAAGATAAAGCAAGAGAAGAGACAGAAAAGAAAATGGAGGAGGAAATTTTGCCCAAACAGAAGGAAGACAAGGGCAAGGGTATTGCTGAAG
CATCGGCTGACGTTGAAGATATCGAAACTGAAGAGCCACGGTTGCCATACAATCGCTTCATCAATAATCTTGCCCGAGCAAAGTATATAGAGATGCTAAAAAGAGACTTT
TTGTTTGAACGGGGATTTGGTGATGATCTGCCGCGTTTCTTGAGAACAGGAATAGCGAACCATGGCTGGAGTCAGTTCTACGCAAAGCCGGAACTGGTCAATTCCAATAT
TGTCCGTTTCAACGAGATGGTGGTAGCACCATCGAATGATCAGTTAAATGCAGCTGTCATGGAGGTTGGTATCGAGGGGGCTCAGTGGAGACTGACGAAGACAGAAAAGC
GCCAAGCGGCTTATCTGAAGAGCGAAGCCAATACATGGATGGGCTTCATCAAGTTCCGCTTACTGTCGACAACTCACGATTCAACGGTGTCTCGCGATTGGGTGCTGTTG
GTATTTGCTATTCTTCGTTCCATGAGCATTGATGTGGGCAAAATAATCTCTAGGGTTCCAATGAATACGGATGATGTCACTCTAATAGACAGAGGAATAATCAACACGCC
GAACTTGGCTAGACTTCAAAGGACGCAAGAAGCATGCCAAGGCAGTTTGGTGTGCGGCATCCATCAAATGCAGGAGAAATTACAGATGCATTCCAGCCGGATGGAATTTG
CTGAAAAGCAATTCCAAACCTTCTGGAATTATGTGAAGAGAAGGGATGCCGCGTTGAGGGGACCCTGCAATCTAATTTTTCTAAACCATATCCGGCCTTCCCGATATTCC
CTAATGACTTGTTGA
Protein sequenceShow/hide protein sequence
MEMCPQLEIQISGAKSRSCRFVPTFGPENVEFAFVVKAIAGATEGCYLHHVYVGNIDSILQLAVMSEDNVGYLILVTLCDTTHCVFDTDALVQSIHGQDRVGTGNITVKD
GIHFFPYWGPLGPPASSKMKTLEEKEAKRRRRQQRAEVEEVVQKVVEDIATKVVEEENPKEPEEQNLGQQDPIVESTQEVQEKQTEDVQERGNKQEVQEQEARVEVVMLE
VPHRRRKQKVGHVKVVRTDTPSPPTTDSEKENTEKEEREKKEAEDKAREETEKKMEEEILPKQKEDKGKGIAEASADVEDIETEEPRLPYNRFINNLARAKYIEMLKRDF
LFERGFGDDLPRFLRTGIANHGWSQFYAKPELVNSNIVRFNEMVVAPSNDQLNAAVMEVGIEGAQWRLTKTEKRQAAYLKSEANTWMGFIKFRLLSTTHDSTVSRDWVLL
VFAILRSMSIDVGKIISRVPMNTDDVTLIDRGIINTPNLARLQRTQEACQGSLVCGIHQMQEKLQMHSSRMEFAEKQFQTFWNYVKRRDAALRGPCNLIFLNHIRPSRYS
LMTC