; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010652 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010652
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription elongation factor TFIIS
Genome locationscaffold2:2264417..2266210
RNA-Seq ExpressionSpg010652
SyntenySpg010652
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR003618 - Transcription elongation factor S-II, central domain
IPR036575 - Transcription elongation factor S-II, central domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578486.1 Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7861.39Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIKETNKNKKNGN +C
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        KE PKIGSPSAES                                                       VKVERIVKEEK+ISIEKKPS G   PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPIRVAVSVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+ST 
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

KAG7016050.1 Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-7861.39Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIKETNKNKKNGN +C
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        KE PKIGSPSAES                                                       VKVERIVKEEK+ISIEKKPS G   PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPIRVAVSVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+ST 
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

XP_022134049.1 transcription elongation factor TFIIS [Momordica charantia]4.4e-7860Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F                                 L       VIKETNKNKKNGN NC
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC

Query:  KERPKIGSPSAESVKV---------------------------------------------------------ERIVKEEKKISIEKKPSGGVATPPKLT
        KE PKIGSPSAESVKV                                                         ER+VKEEKKISI+K+PS G A PPKLT
Subjt:  KERPKIGSPSAESVKV---------------------------------------------------------ERIVKEEKKISIEKKPSGGVATPPKLT

Query:  SMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLS
        SMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDP+RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRR VL+G IKPER+IN+S
Subjt:  SMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLS

Query:  TTDMA
        T +MA
Subjt:  TTDMA

XP_022938772.1 transcription elongation factor TFIIS-like [Cucurbita moschata]1.3e-7760.73Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIK+TNKNKKNGN +C
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        +E PKIGSPSAES                                                       VKVERIVKEEK+ISIEKKPS G   PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPIRVAVSVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+ST 
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

XP_038884917.1 transcription elongation factor TFIIS [Benincasa hispida]3.6e-8061.06Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC
        MENELVELF+AAKKAAD AAA SNDGGAEESRCLDA    + F                                 L       VIKETNKNKKNGN NC
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC

Query:  KERPKIGSPSAESVKVERI-------------------------------------------------------VKEEKKISIEKKPSGGVATPPKLTSM
        K+ PKIGSPSAESVKVE+                                                        VKEE++ISI+KKPSGG A PPKLTSM
Subjt:  KERPKIGSPSAESVKVERI-------------------------------------------------------VKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELLFEAFSKVPGEADEDV+DEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+ST 
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

TrEMBL top hitse value%identityAlignment
A0A5A7U9K1 Transcription elongation factor TFIIS7.6e-7659.26Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F                                 L       VIKETNKNKKNGN + 
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC

Query:  KERPKIGSPSAESVKVER-------------------------------------------------IVKEEKKISIEKKPSGGVATPPKLTSMIKSKDA
        K+ PKIGSPS ESVKVE+                                                 +VK E+ +  EKKPS G A PPKLTSM+KSKDA
Subjt:  KERPKIGSPSAESVKVER-------------------------------------------------IVKEEKKISIEKKPSGGVATPPKLTSMIKSKDA

Query:  ARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
        ARDKIRELLFEAFSKVPGEADEDV+DEVNASDPIRVA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN++T DMA
Subjt:  ARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA

A0A6J1BWY6 transcription elongation factor TFIIS2.1e-7860Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F                                 L       VIKETNKNKKNGN NC
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLY-------------------------------LSNPCFHSVIKETNKNKKNGNDNC

Query:  KERPKIGSPSAESVKV---------------------------------------------------------ERIVKEEKKISIEKKPSGGVATPPKLT
        KE PKIGSPSAESVKV                                                         ER+VKEEKKISI+K+PS G A PPKLT
Subjt:  KERPKIGSPSAESVKV---------------------------------------------------------ERIVKEEKKISIEKKPSGGVATPPKLT

Query:  SMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLS
        SMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDP+RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRR VL+G IKPER+IN+S
Subjt:  SMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLS

Query:  TTDMA
        T +MA
Subjt:  TTDMA

A0A6J1FF11 transcription elongation factor TFIIS-like6.2e-7860.73Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        MENELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIK+TNKNKKNGN +C
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        +E PKIGSPSAES                                                       VKVERIVKEEK+ISIEKKPS G   PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPIRVAVSVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+ST 
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

A0A6J1GYA3 transcription elongation factor TFIIS-like3.1e-7762.38Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        ME ELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIKETNKNKKNGN N 
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        KE  KIGSPSAES                                                       VKVER+VKEEKKISIEKKPS G A PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+ NLSTT
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

A0A6J1JLK7 transcription elongation factor TFIIS-like3.1e-7762.38Show/hide
Query:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC
        ME ELVELFEAAKKAAD AAA SNDGGAEESRCLDA    + F               L +   H                   VIKETNKNKKNGN N 
Subjt:  MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKKNGNDNC

Query:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM
        KE  KIGSPSAES                                                       VKVER+VKEEKKISIEKKPS G A PPKLTSM
Subjt:  KERPKIGSPSAES-------------------------------------------------------VKVERIVKEEKKISIEKKPSGGVATPPKLTSM

Query:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT
        IKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+ NLSTT
Subjt:  IKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTT

Query:  DMA
        DMA
Subjt:  DMA

SwissProt top hitse value%identityAlignment
Q148K0 Transcription elongation factor A protein 23.0e-0529.41Show/hide
Query:  SVIKETNKNKKNGNDNCKERPKIGSPSAESVKVERIVKE--EKKISIEKKPSGGVATPPKLTS---MIKSKDAARDKIRELLFEAFSKVPGEADEDVIDE
        S+IK   K     +   +ER + GS    S K     ++   K+  + + PS      P++T+   +  + DA R K RE+L  A      + D D +  
Subjt:  SVIKETNKNKKNGNDNCKERPKIGSPSAESVKVERIVKE--EKKISIEKKPSGGVATPPKLTS---MIKSKDAARDKIRELLFEAFSKVPGEADEDVIDE

Query:  VNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
           +D   +A  +E  +F + G +    K + RS + NLKD KNP  RRKVL G I P+++  +++ +MA
Subjt:  VNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA

Q15560 Transcription elongation factor A protein 21.4e-0528.4Show/hide
Query:  SVIKETNKNKKNGNDNCKERPK-IGSPSAESVKVERIVKEEKKISIEKKPSGGVATPPKLTS---MIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEV
        S+IK   K     +   +ER + +  P++     E      K+  + + PS      P++T+   +  + DA R+K RE+L  A      + D D +   
Subjt:  SVIKETNKNKKNGNDNCKERPK-IGSPSAESVKVERIVKEEKKISIEKKPSGGVATPPKLTS---MIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEV

Query:  NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
          +D  R++  +E  +F + G +    K + RS + NLKD KNPD RR VL G I P+++  +++ +MA
Subjt:  NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA

Q6ZMY3 SPOC domain-containing protein 11.8e-0524.14Show/hide
Query:  IGSPSAESVKVERIVKEEKKISIEKKPSGGVATPPKLTSM-IKSKDAARDKIRELLFEAFSKVPGEA-DEDVIDEVNASDPIRVAVSVESVMFENWGGST
        +G PS++    +    E ++ S+ ++P        +  S+ I  +      ++E+L+    ++P     E+V++         +A  +E+ +++   G+ 
Subjt:  IGSPSAESVKVERIVKEEKKISIEKKPSGGVATPPKLTSM-IKSKDAARDKIRELLFEAFSKVPGEA-DEDVIDEVNASDPIRVAVSVESVMFENWGGST

Query:  GAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
        G  K KYRS++FNL+DP+N D   KV+ G + P  ++ +S+  +A
Subjt:  GAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA

Q92576 PHD finger protein 38.5e-0832.81Show/hide
Query:  KEEKKISIEKKPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDP
        +E KK  +EK   G +   P  ++   S D  R  +R  L +   K   +++  V +E  A    +VA  +E  +F  +  +    K KYRS+MFNLKDP
Subjt:  KEEKKISIEKKPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDP

Query:  KNPDFRRKVLLGLIKPERVINLSTTDMA
        KN    +KVL G + P+ +I +S  ++A
Subjt:  KNPDFRRKVLLGLIKPERVINLSTTDMA

Q9ZVH8 Transcription elongation factor TFIIS1.8e-3740.52Show/hide
Query:  MENELVELFEAAKKAADVAAASS-NDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKK-NGND
        ME++L++LFE AKKAAD AA       G E S+C+DA    + F               L +   H                   VI+ET K KK  G +
Subjt:  MENELVELFEAAKKAADVAAASS-NDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKK-NGND

Query:  NCK---------ERPKIGSP----------SAESVKVERI---------VKEEKKI----------------------------SIEKKPSGGVATPPKL
         CK         E+P   +P          SA+S+KVER          VK E+K+                            S  K P+     PPKL
Subjt:  NCK---------ERPKIGSP----------SAESVKVERI---------VKEEKKI----------------------------SIEKKPSGGVATPPKL

Query:  TSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINL
        T+M+K  D  RDKIRELL EA  +V GEAD+   + VNASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++I L
Subjt:  TSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINL

Query:  STTDMA
        S  DMA
Subjt:  STTDMA

Arabidopsis top hitse value%identityAlignment
AT2G38560.1 transcript elongation factor IIS1.2e-3840.52Show/hide
Query:  MENELVELFEAAKKAADVAAASS-NDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKK-NGND
        ME++L++LFE AKKAAD AA       G E S+C+DA    + F               L +   H                   VI+ET K KK  G +
Subjt:  MENELVELFEAAKKAADVAAASS-NDGGAEESRCLDAYGSSRNF-------------LYLSNPCFHS------------------VIKETNKNKK-NGND

Query:  NCK---------ERPKIGSP----------SAESVKVERI---------VKEEKKI----------------------------SIEKKPSGGVATPPKL
         CK         E+P   +P          SA+S+KVER          VK E+K+                            S  K P+     PPKL
Subjt:  NCK---------ERPKIGSP----------SAESVKVERI---------VKEEKKI----------------------------SIEKKPSGGVATPPKL

Query:  TSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINL
        T+M+K  D  RDKIRELL EA  +V GEAD+   + VNASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++I L
Subjt:  TSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINL

Query:  STTDMA
        S  DMA
Subjt:  STTDMA

AT2G42730.1 F-box family protein4.2e-1834.86Show/hide
Query:  ENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLYLSNPCFHSVIKETNKNKKNGNDNCKERPKIGSPS--AESVKVERIVKEEKKISIEK
        + E +EL+EAA +AA       N   ++ SR +DA    ++    S  C   V+ +T+  K     N  + P I S       + ++ +    ++ S ++
Subjt:  ENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLYLSNPCFHSVIKETNKNKKNGNDNCKERPKIGSPS--AESVKVERIVKEEKKISIEK

Query:  KPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKV
        +    +   P  ++M K+ D+ RDK+RE+L  +  KV  E  D ++   V A DP  VAVSVES MFE  G   G  KAKYRSI+FN+ D  NPD RRKV
Subjt:  KPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKV

Query:  LLGLIKPERVINLSTTDM
        L+G I  ER++ +   +M
Subjt:  LLGLIKPERVINLSTTDM

AT4G18720.1 Transcription factor IIS protein2.4e-1834.86Show/hide
Query:  ENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLYLSNPCFHSVIKETNKNKKNGNDNCKERPKIGSPS--AESVKVERIVKEEKKISIEK
        + E +ELFEAA +AA   +   ++   E SR +DA    +            V+ +T+  +        + PKI S       + ++      ++ S + 
Subjt:  ENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLYLSNPCFHSVIKETNKNKKNGNDNCKERPKIGSPS--AESVKVERIVKEEKKISIEK

Query:  KPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKV
        + +      P   +M K+ D+ RDK+RE+L  + +KV  E  D ++   V A DP  VAVSVE+ MFEN G   G QKAKYRSI+FN+ D  NPD RRKV
Subjt:  KPSGGVATPPKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKV

Query:  LLGLIKPERVINLSTTDM
        LLG I  ER++ +   +M
Subjt:  LLGLIKPERVINLSTTDM

AT5G25520.1 SPOC domain / Transcription elongation factor S-II protein1.0e-0840.91Show/hide
Query:  DPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
        DP  +A  +E  +F+ +GG     K K RS++FNLKD  NP+ R  V+ G I PER+ N++  ++A
Subjt:  DPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA

AT5G25520.2 SPOC domain / Transcription elongation factor S-II protein1.0e-0840.91Show/hide
Query:  DPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA
        DP  +A  +E  +F+ +GG     K K RS++FNLKD  NP+ R  V+ G I PER+ N++  ++A
Subjt:  DPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGTCGCTGCAGCATCATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTAGATGCCTA
CGGCAGCTCAAGAAATTTCCTGTACTTATCAAATCCTTGTTTCCACTCAGTAATCAAGGAGACCAACAAGAATAAGAAAAATGGAAATGACAACTGTAAAGAGCGACCTA
AAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTTGAAAGAATAGTTAAAGAAGAGAAGAAAATCTCAATAGAAAAGAAACCATCAGGTGGGGTTGCTACACCTCCAAAG
CTTACTTCCATGATTAAATCAAAAGATGCTGCTCGGGACAAAATTAGAGAACTTCTCTTTGAGGCCTTCTCCAAGGTTCCTGGCGAGGCTGATGAAGATGTTATAGATGA
AGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACCGGAGCACAAAAGGCCAAGTACAGATCTATAATGT
TTAACCTCAAGGATCCGAAGAACCCAGACTTTCGGAGAAAAGTTCTTCTTGGACTTATCAAGCCAGAAAGGGTGATCAACTTGAGCACAACTGATATGGCAATCTGTAAT
CTCGTTCCACATTGCTACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGTCGCTGCAGCATCATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTAGATGCCTA
CGGCAGCTCAAGAAATTTCCTGTACTTATCAAATCCTTGTTTCCACTCAGTAATCAAGGAGACCAACAAGAATAAGAAAAATGGAAATGACAACTGTAAAGAGCGACCTA
AAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTTGAAAGAATAGTTAAAGAAGAGAAGAAAATCTCAATAGAAAAGAAACCATCAGGTGGGGTTGCTACACCTCCAAAG
CTTACTTCCATGATTAAATCAAAAGATGCTGCTCGGGACAAAATTAGAGAACTTCTCTTTGAGGCCTTCTCCAAGGTTCCTGGCGAGGCTGATGAAGATGTTATAGATGA
AGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACCGGAGCACAAAAGGCCAAGTACAGATCTATAATGT
TTAACCTCAAGGATCCGAAGAACCCAGACTTTCGGAGAAAAGTTCTTCTTGGACTTATCAAGCCAGAAAGGGTGATCAACTTGAGCACAACTGATATGGCAATCTGTAAT
CTCGTTCCACATTGCTACATTTAG
Protein sequenceShow/hide protein sequence
MENELVELFEAAKKAADVAAASSNDGGAEESRCLDAYGSSRNFLYLSNPCFHSVIKETNKNKKNGNDNCKERPKIGSPSAESVKVERIVKEEKKISIEKKPSGGVATPPK
LTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERVINLSTTDMAICN
LVPHCYI