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Spg010654 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010654
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationscaffold13:193118..203587
RNA-Seq ExpressionSpg010654
SyntenySpg010654
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262979.1 unnamed protein product [Prunus armeniaca]1.4e-2050.4Show/hide
Query:  GRVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPI
        G+V+ Y F+F    + P+E+                      +  L  I    L        + L A +   NFPCQEVERHNKPEVELKTSSELLLNP+
Subjt:  GRVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPI

Query:  LICRNESEKCLIETSINSLRISLKV
        LICRNE+EKCLIETSINSLRISLKV
Subjt:  LICRNESEKCLIETSINSLRISLKV

OMO88611.1 ARP2/3 complex, 20kDa subunit (P20-Arc) [Corchorus olitorius]3.1e-2092.86Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_008456149.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo]3.1e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_008457157.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo]3.1e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_011651239.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]3.1e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

TrEMBL top hitse value%identityAlignment
A0A0A0LHM5 Actin-related protein 2/3 complex subunit 41.5e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1R3J1B1 ARP2/3 complex, 20kDa subunit (P20-Arc)1.5e-2092.86Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1S3C2N8 Actin-related protein 2/3 complex subunit 41.5e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1S3C5J1 Actin-related protein 2/3 complex subunit 41.5e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A6J5THA6 Uncharacterized protein6.8e-2150.4Show/hide
Query:  GRVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPI
        G+V+ Y F+F    + P+E+                      +  L  I    L        + L A +   NFPCQEVERHNKPEVELKTSSELLLNP+
Subjt:  GRVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPI

Query:  LICRNESEKCLIETSINSLRISLKV
        LICRNE+EKCLIETSINSLRISLKV
Subjt:  LICRNESEKCLIETSINSLRISLKV

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 44.6e-2285.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

O96625 Actin-related protein 2/3 complex subunit 44.6e-1462.3Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+ LIETSINS+RIS+ +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

P59998 Actin-related protein 2/3 complex subunit 45.6e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Q148J6 Actin-related protein 2/3 complex subunit 45.6e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Q641G7 Actin-related protein 2/3 complex subunit 43.3e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P++I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding3.2e-2385.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

AT4G14147.2 protein binding3.2e-2385.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGAGTATTCCATTACATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGG
AGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGA
ATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAG
TGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGAGTATTCCATTACATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGG
AGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGA
ATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAG
TGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA
Protein sequenceShow/hide protein sequence
MGRVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
CLIETSINSLRISLKVILFSI