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Spg010682 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010682
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold7:35665608..35669112
RNA-Seq ExpressionSpg010682
SyntenySpg010682
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-1365.28Show/hide
Query:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        WPRGNR  LQTGEL K              PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+S+ + +L
Subjt:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.0e-1362.03Show/hide
Query:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        RA+    WPRGNR SLQTGEL KT              LSTLSVLRDND VVEIELP+PDTLPTSAESS S+S+   +L
Subjt:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

KAA0056731.1 hypothetical protein E6C27_scaffold29G00280 [Cucumis melo var. makuwa]8.8e-1338.82Show/hide
Query:  PRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS--------------TPFHKLVDQLEDRLQEVPL--
        PRGNRSSLQTGEL KT             PLS LSVLRDNDA+VEIELPVPDTLPTSAE+S+S+S              TP  +L  Q+   L    L  
Subjt:  PRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS--------------TPFHKLVDQLEDRLQEVPL--

Query:  --EILECKRLPLEIPVRSTLVAPFSFVSVPSFDDERFFLSSDQCQRKCGRILIAISKTNLVSLLVPDNGA
               +   L + +R    A  S + +   DD+ F + S       G +  A    + +  L+ DN A
Subjt:  --EILECKRLPLEIPVRSTLVAPFSFVSVPSFDDERFFLSSDQCQRKCGRILIAISKTNLVSLLVPDNGA

TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.0e-1362.03Show/hide
Query:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        RA+    WPRGNR SLQTGEL KT              LSTLSVLRDND VVEIELP+PDTLPTSAESS S+S+   +L
Subjt:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

TYK25935.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-1365.28Show/hide
Query:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        WPRGNR  LQTGEL K              PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+S+ + +L
Subjt:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

TrEMBL top hitse value%identityAlignment
A0A5A7SKG8 Uncharacterized protein4.3e-1370.15Show/hide
Query:  LWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS
        +WPRGNRSSLQTGEL KT             PLSTLSVL DNDAVVE ELPVPDTLPTSAES  S+S
Subjt:  LWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS

A0A5A7T9P7 Gag/pol protein4.3e-1365.28Show/hide
Query:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        WPRGNR  LQTGEL K              PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+S+ + +L
Subjt:  WPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

A0A5A7TKT0 Reverse transcriptase1.5e-1362.03Show/hide
Query:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        RA+    WPRGNR SLQTGEL KT              LSTLSVLRDND VVEIELP+PDTLPTSAESS S+S+   +L
Subjt:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

A0A5D3D150 Reverse transcriptase1.5e-1362.03Show/hide
Query:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL
        RA+    WPRGNR SLQTGEL KT              LSTLSVLRDND VVEIELP+PDTLPTSAESS S+S+   +L
Subjt:  RAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKL

A0A5D3DCA4 Uncharacterized protein4.3e-1338.82Show/hide
Query:  PRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS--------------TPFHKLVDQLEDRLQEVPL--
        PRGNRSSLQTGEL KT             PLS LSVLRDNDA+VEIELPVPDTLPTSAE+S+S+S              TP  +L  Q+   L    L  
Subjt:  PRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSS--------------TPFHKLVDQLEDRLQEVPL--

Query:  --EILECKRLPLEIPVRSTLVAPFSFVSVPSFDDERFFLSSDQCQRKCGRILIAISKTNLVSLLVPDNGA
               +   L + +R    A  S + +   DD+ F + S       G +  A    + +  L+ DN A
Subjt:  --EILECKRLPLEIPVRSTLVAPFSFVSVPSFDDERFFLSSDQCQRKCGRILIAISKTNLVSLLVPDNGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGCTAAGACACCCGAGGCTATATG
GTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTG
CTGAAAGTTCTAGATCAAGCTCCACTCCCTTCCACAAACTTGTGGATCAACTTGAGGATCGACTCCAGGAGGTTCCATTGGAAATTCTTGAATGTAAGAGGCTTCCTCTA
GAAATTCCTGTGCGCTCAACACTTGTTGCTCCTTTTTCATTCGTCTCTGTTCCTTCCTTTGACGACGAAAGATTCTTTCTATCTTCGGATCAATGTCAACGAAAATGTGG
TCGCATTCTGATCGCAATTTCAAAAACAAATCTGGTTTCACTTTTGGTCCCCGACAACGGCGCCAAAACCTTGGTGCGTCGTCAGCTGAATGGATGGAATGTGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGCTAAGACACCCGAGGCTATATG
GTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTG
CTGAAAGTTCTAGATCAAGCTCCACTCCCTTCCACAAACTTGTGGATCAACTTGAGGATCGACTCCAGGAGGTTCCATTGGAAATTCTTGAATGTAAGAGGCTTCCTCTA
GAAATTCCTGTGCGCTCAACACTTGTTGCTCCTTTTTCATTCGTCTCTGTTCCTTCCTTTGACGACGAAAGATTCTTTCTATCTTCGGATCAATGTCAACGAAAATGTGG
TCGCATTCTGATCGCAATTTCAAAAACAAATCTGGTTTCACTTTTGGTCCCCGACAACGGCGCCAAAACCTTGGTGCGTCGTCAGCTGAATGGATGGAATGTGAGATAA
Protein sequenceShow/hide protein sequence
MENRAQDFRAKQEDLWPRGNRSSLQTGELAKTPEAIWYRVHTGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSTPFHKLVDQLEDRLQEVPLEILECKRLPL
EIPVRSTLVAPFSFVSVPSFDDERFFLSSDQCQRKCGRILIAISKTNLVSLLVPDNGAKTLVRRQLNGWNVR