; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010696 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010696
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold5:13672790..13673629
RNA-Seq ExpressionSpg010696
SyntenySpg010696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]2.2e-0840.62Show/hide
Query:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLY
        + F    IN +Y +K   +  G+   +NP A+ L++AL+ +   G +W    T+   L  +DL  E +VWL FIK  +MPT HDSTIS+E +MLLY
Subjt:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLY

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.0e-0939.05Show/hide
Query:  SSVDINKVYHIKAPL--HPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKG
        S+  IN +Y +  P+  H    +AI  P   +L   L+ VA  G +W  S     T + S L P   VW HF+K++L+PTTH  T+S ERV+LLYS++ G
Subjt:  SSVDINKVYHIKAPL--HPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKG

Query:  PTIDL
         +I++
Subjt:  PTIDL

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]4.2e-1237.74Show/hide
Query:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMK
        +SFS+ DIN++Y +K   +  GN  I +P  +Q+++AL+++ + G++W  S   V TL S  L  E  +W++ +K +L+ TTHD T+S +RVM  Y I++
Subjt:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMK

Query:  GPTIDL
           ID+
Subjt:  GPTIDL

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]7.4e-0934.51Show/hide
Query:  FSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVML---LYSIM
        FS+ DIN++Y +K  L   GN  I +P    +++ L+++ + G QW  S   +KTL S+ L PE  +W++ +K +L+PT+H+ T+S   +++    +S  
Subjt:  FSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVML---LYSIM

Query:  KGP---TIDLPLI
        K P   T+ LPL+
Subjt:  KGP---TIDLPLI

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.7e-1334.76Show/hide
Query:  MMSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIM
        ++ FS+ DIN++Y +K      GN  I +P  +++++AL+ + + G QW  S   +KTL SS L PE  +W++ +K +++PT+HD T+S +RVM  Y I 
Subjt:  MMSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIM

Query:  KGPTIDLP-LIRKLQQNNAQRKEKASTS----QATPSP------GLNPASPPQHTPVSGPTPSS
         G  ID+  LI    +  AQRK++   S     A P+         +P+ P   TP   PTP +
Subjt:  KGPTIDLP-LIRKLQQNNAQRKEKASTS----QATPSP------GLNPASPPQHTPVSGPTPSS

TrEMBL top hitse value%identityAlignment
A0A0A0L2P0 Uncharacterized protein5.2e-0845.57Show/hide
Query:  GNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMK
        G+D +KNP A+ L+ ALK V         + T    L+  +L  E  +WL F+K K+MPT HD+ IS+ERVML+Y IMK
Subjt:  GNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMK

A0A2P5BNT0 Uncharacterized protein (Fragment)2.3e-0834.95Show/hide
Query:  SSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKGPT
        S+  IN +Y +   L    ++ +++    +L   L+ VA  G +W  S   V T + S L P   +W HF+K++L+PTTH   +S ERV+LLYS++ G +
Subjt:  SSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKGPT

Query:  IDL
        I++
Subjt:  IDL

A0A2P5CPE8 Uncharacterized protein9.4e-1039.05Show/hide
Query:  SSVDINKVYHIKAPL--HPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKG
        S+  IN +Y +  P+  H    +AI  P   +L   L+ VA  G +W  S     T + S L P   VW HF+K++L+PTTH  T+S ERV+LLYS++ G
Subjt:  SSVDINKVYHIKAPL--HPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKG

Query:  PTIDL
         +I++
Subjt:  PTIDL

A0A5A7U0U4 Uncharacterized protein1.0e-0839.39Show/hide
Query:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIM
        ++F    IN +Y +K   +  G+   KNP  + L+EAL+     G +W +  T +  L   +L  E +VWL FIK  +MPT HD+ IS+ER+MLLY I+
Subjt:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIM

A0A5D3CW17 Uncharacterized protein1.0e-0840.62Show/hide
Query:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLY
        + F    IN +Y +K   +  G+   +NP A+ L++AL+ +   G +W    T+   L  +DL  E +VWL FIK  +MPT HDSTIS+E +MLLY
Subjt:  MSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTTTCTCTTCGGTTGACATCAACAAGGTATATCATATCAAAGCTCCTTTGCATCCGAGAGGGAACGATGCCATCAAGAACCCTTTGGCCAAACAGTTAAAGGA
AGCATTAAAGATGGTTGCCAGAAAAGGAGTCCAGTGGAAGGAGTCTCAAACCAAAGTGAAGACACTAGTGTCAAGTGATCTTAAGCCAGAACCGACAGTGTGGCTTCACT
TCATCAAAAACAAGTTGATGCCTACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTATAGCATCATGAAGGGGCCCACTATCGACTTGCCTCTGATA
AGGAAGCTTCAACAGAACAATGCGCAGAGAAAGGAAAAGGCTTCCACATCCCAAGCTACTCCATCTCCGGGGCTGAATCCTGCTTCACCTCCTCAGCACACTCCTGTTTC
AGGGCCTACACCATCATCAGAGGTCCTTGCATTTGTCTTCCGACAGCTAGACCGGATTGAAGACAAGCTGAAAACTTATTGGGTCTATGCGAAGGAAAGAGATGAAGCAA
TTAGAGAGTTCTACCTCTCTATCGCCCCAAGCATTGCTCCTGATTTCCCTCAAGCCCTGCTGCCTCAAGAAGAAAAAGAATCTGAAGATGAAGATGAAGATGAAGAAGAT
GAAGAGCATTCCTCGGATGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGTTTCTCTTCGGTTGACATCAACAAGGTATATCATATCAAAGCTCCTTTGCATCCGAGAGGGAACGATGCCATCAAGAACCCTTTGGCCAAACAGTTAAAGGA
AGCATTAAAGATGGTTGCCAGAAAAGGAGTCCAGTGGAAGGAGTCTCAAACCAAAGTGAAGACACTAGTGTCAAGTGATCTTAAGCCAGAACCGACAGTGTGGCTTCACT
TCATCAAAAACAAGTTGATGCCTACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTATAGCATCATGAAGGGGCCCACTATCGACTTGCCTCTGATA
AGGAAGCTTCAACAGAACAATGCGCAGAGAAAGGAAAAGGCTTCCACATCCCAAGCTACTCCATCTCCGGGGCTGAATCCTGCTTCACCTCCTCAGCACACTCCTGTTTC
AGGGCCTACACCATCATCAGAGGTCCTTGCATTTGTCTTCCGACAGCTAGACCGGATTGAAGACAAGCTGAAAACTTATTGGGTCTATGCGAAGGAAAGAGATGAAGCAA
TTAGAGAGTTCTACCTCTCTATCGCCCCAAGCATTGCTCCTGATTTCCCTCAAGCCCTGCTGCCTCAAGAAGAAAAAGAATCTGAAGATGAAGATGAAGATGAAGAAGAT
GAAGAGCATTCCTCGGATGAGGAATAA
Protein sequenceShow/hide protein sequence
MMSFSSVDINKVYHIKAPLHPRGNDAIKNPLAKQLKEALKMVARKGVQWKESQTKVKTLVSSDLKPEPTVWLHFIKNKLMPTTHDSTISVERVMLLYSIMKGPTIDLPLI
RKLQQNNAQRKEKASTSQATPSPGLNPASPPQHTPVSGPTPSSEVLAFVFRQLDRIEDKLKTYWVYAKERDEAIREFYLSIAPSIAPDFPQALLPQEEKESEDEDEDEED
EEHSSDEE