; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010762 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010762
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold10:5236865..5240258
RNA-Seq ExpressionSpg010762
SyntenySpg010762
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]7.5e-1429.83Show/hide
Query:  FVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL---
        FV+  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P  VNA +V+EFY+NI E     V+VRG+++ ++P AIN  + L   
Subjt:  FVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL---

Query:  --------QDFPHAGY----------------NEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
                Q+  H  Y                 +++++T     L      W  F+K +L+PT+H++TVS +R+LL  +IL
Subjt:  --------QDFPHAGY----------------NEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]9.9e-1432.03Show/hide
Query:  VNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNLQDFP
        V+  A  +Y  +  R   FE GF        DL   +   +T H W+ F   P +VNA +V+EFY+NI E     ++V G+++ ++P AIN  + LQ   
Subjt:  VNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNLQDFP

Query:  HAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
             ++ ++T     L      W  F+K +LLPT+H++TVS +R++L  +I+
Subjt:  HAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

PIN01090.1 hypothetical protein CDL12_26404 [Handroanthus impetiginosus]4.9e-1333.33Show/hide
Query:  LLKRDFLFERGFSGDLPH--FLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALY-------------------NL
        +L+R F+ ERG     PH     A I    WE     P++    VVREFYAN+   +   V+VRG  V +S  +IN  +                   N+
Subjt:  LLKRDFLFERGFSGDLPH--FLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALY-------------------NL

Query:  QDFPHAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAI
         D     Y E  +++F+++ L +E+  W+ +I  R+LPTTH S VS+ER +L +AI
Subjt:  QDFPHAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.7e-1333.51Show/hide
Query:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP F+   IT H W+ FC+ PE     +VREFYAN+ +     V VRGV V WS  AINA++ L
Subjt:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL

Query:  QDFPHAGYNEMEKR----------------------TFQSTY------LKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
         D P   ++E  +                       + Q  Y      L   A  W  F+K  LLPTTH  TVS++R+LL  ++L
Subjt:  QDFPHAGYNEMEKR----------------------TFQSTY------LKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-1434.05Show/hide
Query:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP F+   IT H W+ FC+ PE     +VREFYAN+ + E   V VRGV V WS  AINA++ L
Subjt:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL

Query:  QDFPHAGYNEMEKRTFQS----------------------------TYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
         D P   ++E  +   Q                             + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L
Subjt:  QDFPHAGYNEMEKRTFQS----------------------------TYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

TrEMBL top hitse value%identityAlignment
A0A2G9G7Z2 Uncharacterized protein2.4e-1333.33Show/hide
Query:  LLKRDFLFERGFSGDLPH--FLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALY-------------------NL
        +L+R F+ ERG     PH     A I    WE     P++    VVREFYAN+   +   V+VRG  V +S  +IN  +                   N+
Subjt:  LLKRDFLFERGFSGDLPH--FLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALY-------------------NL

Query:  QDFPHAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAI
         D     Y E  +++F+++ L +E+  W+ +I  R+LPTTH S VS+ER +L +AI
Subjt:  QDFPHAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAI

A0A2P5AGA5 Uncharacterized protein (Fragment)1.8e-1333.51Show/hide
Query:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP F+   IT H W+ FC+ PE     +VREFYAN+ +     V VRGV V WS  AINA++ L
Subjt:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL

Query:  QDFPHAGYNEMEKR----------------------TFQSTY------LKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
         D P   ++E  +                       + Q  Y      L   A  W  F+K  LLPTTH  TVS++R+LL  ++L
Subjt:  QDFPHAGYNEMEKR----------------------TFQSTY------LKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

A0A2P5BCG4 Uncharacterized protein (Fragment)9.6e-1534.05Show/hide
Query:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP F+   IT H W+ FC+ PE     +VREFYAN+ + E   V VRGV V WS  AINA++ L
Subjt:  RFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL

Query:  QDFPHAGYNEMEKRTFQS----------------------------TYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
         D P   ++E  +   Q                             + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L
Subjt:  QDFPHAGYNEMEKRTFQS----------------------------TYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

A0A6A2ZUE4 Uncharacterized protein3.7e-1429.83Show/hide
Query:  FVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL---
        FV+  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P  VNA +V+EFY+NI E     V+VRG+++ ++P AIN  + L   
Subjt:  FVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNL---

Query:  --------QDFPHAGY----------------NEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
                Q+  H  Y                 +++++T     L      W  F+K +L+PT+H++TVS +R+LL  +IL
Subjt:  --------QDFPHAGY----------------NEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein4.8e-1432.03Show/hide
Query:  VNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNLQDFP
        V+  A  +Y  +  R   FE GF        DL   +   +T H W+ F   P +VNA +V+EFY+NI E     ++V G+++ ++P AIN  + LQ   
Subjt:  VNNLARAKYAELLKRDFLFERGF------SGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYNLQDFP

Query:  HAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL
             ++ ++T     L      W  F+K +LLPT+H++TVS +R++L  +I+
Subjt:  HAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGCAAAATCTTTCGGTTAGGATTCCTTTTGTTGAAGCTCTATTTATTAACAGCCTTCAGTAAGTCTTTTTCACTTCATCTTCTCGTTTCAACCTTTTCCGTTTG
TATTCTTCTTTCTTTGCTTCTGTGTGCGGTAAATTCCTTTGAGTCTTCAATGGCAAAAACAAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACTTGTTACCC
CCGAAGTACCGAAAACGAAGGCAAAGAAAAAGAAGACACCAGAAGAGAAAAAAGCTAAGAGGAGAAGAAGACACCAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGACT
AACCCGAGAGTTGCGGATGCGGAGGAAGTTCAAGAAGAAAACACAAAGGAAGTTCAAAAAGAAAACACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGCGCAAGAAGG
ACAGACAGAGGTTGCGCCTGAAAAAGGTAATGAACAAAAGCAGAAGGCTCGAGTGGAGGTTATCATGCTAGAAGTGCCAAGACGTCGCCGTCGGAAGCAAAAAGCCGGTC
GTGTTAAGGAGAAAAAAGAGGCCGAAGCCAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAGGAAGAAATTTTGCTCAAACAAAGGGAAGCCAAGGGCAAGGGCATTGCT
GAAGCATCGCCGGAACCAGAAGGTAGCAAAACAGAGGAACCAAGGTTGTCGTATAATCGCTTCGTCAACAATCTTGCCAGAGCAAAGTATGCTGAGCTGCTGAAGAGAGA
CTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTTCCACATTTTTTGCGGGCCGGCATTACGAACCACGGTTGGGAGTTATTCTGTTCCACGCCTGAATCTGTGAACGCTC
ATGTAGTGCGCGAGTTTTATGCAAATATTGACGAGGAAGAGGGTTTTCAAGTTATCGTTCGAGGAGTAGCAGTTGACTGGAGTCCTGGTGCCATTAACGCCCTGTATAAC
CTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGAGAAAAGGACATTTCAGTCAACCTATCTTAAGAAGGAAGCAAATACATGGATGGGATTCATCAAACAAAGGTT
GCTACCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTTGCTTTCGCGATTTTAAGGCAAGAGTTTGCCGAGAGGCAATCTCAAACTTTCTGGAGCTATG
TTAAACGACGTGATGCCAATCTGAAGAAGGCGCTACAGGAAATACCCAGCCCTTCCGTTCTTCTAGCCTGGTCGATGTTGTGGCAAGAAGATTCTGAGATTTATTTTGCT
GCAGCAGAGCATGGTTTTGCAGGATGCTCAGAATATATTGCTGAGCGACTTGAAGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAACTGCCACGTCACAGCTCAT
TAGCCAATTTAATGAACTGAATTCGGTTAAGCTATTCTCGGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGCAAAATCTTTCGGTTAGGATTCCTTTTGTTGAAGCTCTATTTATTAACAGCCTTCAGTAAGTCTTTTTCACTTCATCTTCTCGTTTCAACCTTTTCCGTTTG
TATTCTTCTTTCTTTGCTTCTGTGTGCGGTAAATTCCTTTGAGTCTTCAATGGCAAAAACAAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACTTGTTACCC
CCGAAGTACCGAAAACGAAGGCAAAGAAAAAGAAGACACCAGAAGAGAAAAAAGCTAAGAGGAGAAGAAGACACCAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGACT
AACCCGAGAGTTGCGGATGCGGAGGAAGTTCAAGAAGAAAACACAAAGGAAGTTCAAAAAGAAAACACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGCGCAAGAAGG
ACAGACAGAGGTTGCGCCTGAAAAAGGTAATGAACAAAAGCAGAAGGCTCGAGTGGAGGTTATCATGCTAGAAGTGCCAAGACGTCGCCGTCGGAAGCAAAAAGCCGGTC
GTGTTAAGGAGAAAAAAGAGGCCGAAGCCAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAGGAAGAAATTTTGCTCAAACAAAGGGAAGCCAAGGGCAAGGGCATTGCT
GAAGCATCGCCGGAACCAGAAGGTAGCAAAACAGAGGAACCAAGGTTGTCGTATAATCGCTTCGTCAACAATCTTGCCAGAGCAAAGTATGCTGAGCTGCTGAAGAGAGA
CTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTTCCACATTTTTTGCGGGCCGGCATTACGAACCACGGTTGGGAGTTATTCTGTTCCACGCCTGAATCTGTGAACGCTC
ATGTAGTGCGCGAGTTTTATGCAAATATTGACGAGGAAGAGGGTTTTCAAGTTATCGTTCGAGGAGTAGCAGTTGACTGGAGTCCTGGTGCCATTAACGCCCTGTATAAC
CTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGAGAAAAGGACATTTCAGTCAACCTATCTTAAGAAGGAAGCAAATACATGGATGGGATTCATCAAACAAAGGTT
GCTACCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTTGCTTTCGCGATTTTAAGGCAAGAGTTTGCCGAGAGGCAATCTCAAACTTTCTGGAGCTATG
TTAAACGACGTGATGCCAATCTGAAGAAGGCGCTACAGGAAATACCCAGCCCTTCCGTTCTTCTAGCCTGGTCGATGTTGTGGCAAGAAGATTCTGAGATTTATTTTGCT
GCAGCAGAGCATGGTTTTGCAGGATGCTCAGAATATATTGCTGAGCGACTTGAAGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAACTGCCACGTCACAGCTCAT
TAGCCAATTTAATGAACTGAATTCGGTTAAGCTATTCTCGGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
Protein sequenceShow/hide protein sequence
MRSKIFRLGFLLLKLYLLTAFSKSFSLHLLVSTFSVCILLSLLLCAVNSFESSMAKTRARKERDNEEEEVLVTPEVPKTKAKKKKTPEEKKAKRRRRHQRAEDQEIVQKT
NPRVADAEEVQEENTKEVQKENTEEVQEKQTEDAQEGQTEVAPEKGNEQKQKARVEVIMLEVPRRRRRKQKAGRVKEKKEAEAKAREEAEKKAEEEILLKQREAKGKGIA
EASPEPEGSKTEEPRLSYNRFVNNLARAKYAELLKRDFLFERGFSGDLPHFLRAGITNHGWELFCSTPESVNAHVVREFYANIDEEEGFQVIVRGVAVDWSPGAINALYN
LQDFPHAGYNEMEKRTFQSTYLKKEANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRQEFAERQSQTFWSYVKRRDANLKKALQEIPSPSVLLAWSMLWQEDSEIYFA
AAEHGFAGCSEYIAERLEGANSVLQQSWEQTATSQLISQFNELNSVKLFSDLRSKESHPRV