; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010773 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010773
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:6579590..6585521
RNA-Seq ExpressionSpg010773
SyntenySpg010773
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]7.4e-3427.61Show/hide
Query:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST
        S   T+D   W  D  G ++VKS Y+LA    +   +S S  + Q ++W   W   +  + ++  W++IN A+P   N+F++ V+ +  C LC +  ES 
Subjt:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST

Query:  PHIIWECKIIKKFWEEA---IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE
         H ++ C   K  W+     +  TK+ F          DY  ++   L+K ELE+    MW +W+ RN   H + +    ++    E  + ++       
Subjt:  PHIIWECKIIKKFWEEA---IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE

Query:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE
           VS   + A    W  P +++ K+N DAA +   N  GIG ++ DS G +I + SK +  N+  + +EAKA+  G++  +     Q  P  +E+D L 
Subjt:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE

Query:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL
        ++ AL+G+   LS    ++++I   +S   +    H RR +N  AH +A+ A  L
Subjt:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL

XP_030964861.1 uncharacterized protein LOC115986145 [Quercus lobata]1.4e-3228.12Show/hide
Query:  SKKETKDEIFWGPDKKGIFSVKSAYHLA---IESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFV
        S   T D I W  +K+G++SVKS Y++A   +++ +  E S S K +Q   W+ +W  ++  + KV  W+  ++ +P + N+  + +L +  C LC +  
Subjt:  SKKETKDEIFWGPDKKGIFSVKSAYHLA---IESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFV

Query:  ESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE
        E+  H +WEC + K  W   + +   L  CG++  +    +  + + LS  + E  L+  W +WN RN   H   +     L+K  +  ++D+     + 
Subjt:  ESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE

Query:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE
          PV+   S +  D+W  P +  +KLN DAA      C G+G V+ + +  ++ + S R      I + EA+ IL   K +E+        L IE D   
Subjt:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE

Query:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA
        ++R++     DLS    I+ +I  L   L  V F   +R +N+VAH +AR A
Subjt:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA

XP_042956310.1 uncharacterized protein LOC122292152 [Carya illinoinensis]1.4e-3229.68Show/hide
Query:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW
        +D I WG  K G+FSVKSAYHL  E    +E+  S        W SIW  K+    +   WK  ++A+P   N+  + V  + LCP+CQ   E++ H +W
Subjt:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW

Query:  ECKIIKKFWEEA-IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRP
         C + K  W +A I   K    C +     +D W+ + + L K ELE + +    +WN RN+  H +      S+ +  + + + +  T  +    +   
Subjt:  ECKIIKKFWEEA-IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRP

Query:  RSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG
        R+Q ++  W  P    +KLN DAA +      GIG +V D NG ++ S     + N S  S EA A++  ++  +   F   I    E D+L+++R +K 
Subjt:  RSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG

Query:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN
          ED S+  +I+++  +L+      D  H +R SN  A  +A++A N
Subjt:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN

XP_042958247.1 uncharacterized protein LOC122293873 [Carya illinoinensis]4.1e-3229.68Show/hide
Query:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW
        +D I WG  K G+FSVKSAYHL  E    +E+  S        W SIW  K+    +   WK  ++A+P   N+  + V  + LCP+CQ   E++ H +W
Subjt:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW

Query:  ECKIIKKFWEEA-IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRP
         C   K  W +A I   K    C +     +D W+ + + L K ELE + +    +WN RN+  H +      S+ +  + + + +  T  +    +   
Subjt:  ECKIIKKFWEEA-IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRP

Query:  RSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG
        R+Q ++  W  P    +KLN DAA +      GIG +V D NG ++ S     + N S  S EA A++  ++  +   F   I    E D+L+++R +K 
Subjt:  RSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG

Query:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN
          ED S+  +I+++  +L+      D  H +R SN  A  +A++A N
Subjt:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN

XP_042974832.1 uncharacterized protein LOC122306468 [Carya illinoinensis]1.6e-3328.9Show/hide
Query:  DEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWE
        D + WG  + G+FSVKS YHL  E     EA  S    QS  W  +W  ++    KV  W+  N+ +P  AN+  + ++    CP+C +  E+  H +W 
Subjt:  DEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWE

Query:  CKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRPRS
        C   +  W +A   +K +     E  + K+ W  + D L    +E     M  +W  RN+  H +     +S+     K   D     L     VS   +
Subjt:  CKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRPRS

Query:  QASQ--DSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG
        + S+    W  P    +KLN DAA N+  N  GIG ++ D NG ++ +   R + N S  + EA A++  V   +   FR  I    E D+L+++  ++ 
Subjt:  QASQ--DSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG

Query:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA----CNLH
        +++D S+  +I+++   L+  LV   F H +R SN  AH +A+NA    C+L+
Subjt:  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA----CNLH

TrEMBL top hitse value%identityAlignment
A0A2N9E9A1 Reverse transcriptase domain-containing protein4.2e-3527.91Show/hide
Query:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW
        +D + WG  + GI++V+S YHL ++ +  +    SD + Q+  W SIW+  +  + +   W+  +D++P K N+ ++ VL +P CP C   VEST H + 
Subjt:  KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIW

Query:  ECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRPR
        +CK +++ W +A P  + L      ++   + +      L  +EL    + +WS+W  RN+   +Q I   D L     + + +++     +H P +RP 
Subjt:  ECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRPR

Query:  SQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGE
           +   W  P    +K+N D A    +N  GIG +V +  G ++ +  +RI   +SI+++EA A    V  +     ++   ++IE D+L+II AL+  
Subjt:  SQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGE

Query:  SEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA
        S   +    ++ +  +L   L S  F H +R  N+VAH +A+ A
Subjt:  SEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA

A0A2N9GI95 Reverse transcriptase domain-containing protein5.2e-3326.33Show/hide
Query:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST
        S     D + WG  + G ++V+S YHL I+ +   +    D ++ ++ W+SIW+ ++ P+ + C W+  ++++P + N+ ++ ++ +P C  C   VE+T
Subjt:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST

Query:  PHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKT-------EHSQVIPSADSLHKSFEKNVKDWEDT
         H +W CK I+  W + +P  + L      ++   D W      LS  EL+   +  W +W  RN+        + ++++P A  L   F         T
Subjt:  PHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKT-------EHSQVIPSADSLHKSFEKNVKDWEDT

Query:  NLEEHHPVSRPRSQASQ-DSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIE
        N ++  PVS   S+AS    W+ PA+  +K+N D A     N  G+G ++ ++ G+++ S  +R+    SI+++EA A    ++  +   F +   +E+E
Subjt:  NLEEHHPVSRPRSQASQ-DSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIE

Query:  SDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA
         D+  ++ AL       +    I+++I  +   L SV F+H +R  N +AH +A+ A
Subjt:  SDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA

A0A2N9H1N4 RNase H domain-containing protein1.0e-3326.65Show/hide
Query:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST
        S +   D + WG  K G++SVKS YHL +     +E+  SD S+ S  W S+W+  + P+ +   W+  ++++P ++N+ ++ +L +P C +C K +EST
Subjt:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST

Query:  PHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHP
         H +W+CK ++  W ++I   + L      ++   D        LS  EL+   +  WS+W  RN+    Q + +   L +    ++ ++++    E   
Subjt:  PHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHP

Query:  VSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIR
          +P S A+   W  PAQ  +K+N D A    +N  GIG ++ +  G ++ S S+R     S++++EA A    ++      F +   +++E D+  ++ 
Subjt:  VSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIR

Query:  ALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA
        AL       +    I+++   +   L SV F H  R  N +AH +A+ A
Subjt:  ALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA

A0A803PIB6 Uncharacterized protein3.6e-3427.61Show/hide
Query:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST
        S   T+D   W  D  G ++VKS Y+LA    +   +S S  + Q ++W   W   +  + ++  W++IN A+P   N+F++ V+ +  C LC +  ES 
Subjt:  SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVEST

Query:  PHIIWECKIIKKFWEEA---IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE
         H ++ C   K  W+     +  TK+ F          DY  ++   L+K ELE+    MW +W+ RN   H + +    ++    E  + ++       
Subjt:  PHIIWECKIIKKFWEEA---IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE

Query:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE
           VS   + A    W  P +++ K+N DAA +   N  GIG ++ DS G +I + SK +  N+  + +EAKA+  G++  +     Q  P  +E+D L 
Subjt:  HHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE

Query:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL
        ++ AL+G+   LS    ++++I   +S   +    H RR +N  AH +A+ A  L
Subjt:  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL

A0A803QEG9 Uncharacterized protein3.6e-3428.3Show/hide
Query:  TKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHII
        T+D++ W     G F+V+SAYHLA    +   +S S  + Q  +W   W+ +I  + K+ +W++I+DA+P   ++  + ++ +  C +C++  EST H +
Subjt:  TKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHII

Query:  WECKIIKKFWEEAIPKTKSLFNCGRENWNPK------DYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSL---HKSFEKNVKDWE----
        + CK  K  W          FN    NW+        DY  ++    +K E+E     MW++W  RNK  H +    A+ L      F +N +  +    
Subjt:  WECKIIKKFWEEAIPKTKSLFNCGRENWNPK------DYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSL---HKSFEKNVKDWE----

Query:  ---------DTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTC
                 D       P   P + A+  SW  PA + +KLN+DAA    +N  G+G V+ D++GS+  + +  I  N+    +EAKA+   +       
Subjt:  ---------DTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTC

Query:  FRQRIPL-EIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL
         +Q++P+  IE+DAL ++ ALK      SE   ++ ++ SL+S   +V   H  R++N  AH +A+ A  L
Subjt:  FRQRIPL-EIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein1.7e-1222.49Show/hide
Query:  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKD-YWSWMRDNLSKEEL
        IW  K  P+ K   WK+++ A+    N+  + +  +P C  C +  E++ H+ ++C   ++ W  +    + L   G       +   S    N   +  
Subjt:  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKD-YWSWMRDNLSKEEL

Query:  ERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNL------EEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHD
          ++  +W +W  RN+    Q   S  +  +    +V++WEDTN       ++ H     +   ++  W+ P     K N D A+N        GW++ D
Subjt:  ERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNL------EEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHD

Query:  SNGSLICSG
         NG  + SG
Subjt:  SNGSLICSG

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.8e-0732.79Show/hide
Query:  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKK
        IW+ KI P+ K+  WK +N+A+P  A + ++ + + P C  C+ F E+  HI++ C   ++
Subjt:  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKK

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)4.8e-0724.41Show/hide
Query:  MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE---HHPVSRPRSQASQDS--WEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLIC
        MW +W  RN+    Q+      + +  E+   +W +T + +    H   +P  + S  S  W  P +   K N D+ + +  +     W++ DSNG +I 
Subjt:  MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE---HHPVSRPRSQASQDS--WEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLIC

Query:  SGSKRIKRNWSIKSLEAKAILEGVKMI
        SG  ++++++S    EA   L  ++M+
Subjt:  SGSKRIKRNWSIKSLEAKAILEGVKMI

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-0620.1Show/hide
Query:  MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDW-EDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSK
        MW +W   N    +       +  +    + K+W ++T   E    +R    +    W  P ++  K N DA+ +E     G+GW++ +S G++I  G  
Subjt:  MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDW-EDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSK

Query:  RIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA
        + +   + +  E   ++  ++   Y    +++  E ++  +  +   K  +  L      LD I S +    S++F    R  N  A  +A+ A
Subjt:  RIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCGGAAAAAGAATATTGTATCGGTTGGACTCTAAGCCGTGGAAAGAGTCGTGTTCTTCAATCGAATACCCAAGAGGAGCTTGGGGAGTGGAATGGCGTCACATA
CAGAGATTGGAGTAAGAAAGAGACCAAGGACGAGATCTTCTGGGGGCCGGACAAAAAAGGGATCTTTTCTGTCAAGAGTGCCTACCACCTAGCAATTGAATCTAGAGATG
CCCAAGAAGCCTCCCAATCGGATAAAAGCAAGCAGTCCTCCTTCTGGAACAGCATCTGGAACACCAAAATCCTCCCTCGGGCCAAAGTTTGCTCATGGAAGATCATTAAT
GACGCTATTCCGTGCAAGGCCAACGTTTTTAACAAGGGAGTTCTTCTCAACCCTCTCTGTCCTTTATGCCAAAAGTTTGTTGAATCCACCCCTCATATTATATGGGAGTG
CAAAATTATCAAAAAGTTTTGGGAAGAGGCTATTCCGAAAACTAAATCTTTGTTCAATTGTGGCAGGGAAAATTGGAATCCTAAAGATTATTGGAGCTGGATGAGAGATA
ACCTTTCAAAAGAAGAGTTGGAAAGAAGCCTTATTGCCATGTGGAGCGTGTGGAATTTTAGAAACAAAACAGAACATTCTCAAGTCATTCCATCAGCAGATTCTCTCCAT
AAAAGCTTCGAAAAGAATGTCAAGGATTGGGAAGATACAAACCTGGAAGAGCATCATCCAGTGAGCAGGCCTAGGAGCCAGGCGAGTCAAGATTCGTGGGAAGCCCCGGC
GCAAAATTCGTGGAAATTGAACTCCGATGCAGCGTGGAATGAAGTTGCGAACTGTGGAGGAATTGGGTGGGTCGTTCATGACTCGAACGGATCCTTGATCTGCAGCGGAT
CGAAACGCATCAAGAGAAATTGGTCAATAAAATCCTTGGAAGCAAAAGCAATTTTAGAGGGGGTTAAGATGATCGAGTATACATGCTTTCGTCAAAGAATCCCCCTCGAA
ATTGAATCGGATGCGCTCGAAATCATCAGAGCGTTGAAGGGAGAATCTGAAGATCTCTCTGAGTCGAAGGTCATCTTAGATGAAATCATCAGTCTCGTTTCGCGGCTGGT
CTCGGTGGATTTCCGCCATTATCGAAGGTCTTCGAACACAGTAGCCCACTGTGTAGCGAGAAACGCTTGTAATCTTCATTTTCGTTTTGGCCAGGAGGCTCCCCTCTCGC
GGGAAAATGGGTTTCATTTTGTAGCCCCTGGCATCGTGGTGAACCCGACGTTTTGTAATCCCTCTGGTTCTCTGAGGGTTGGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCGGAAAAAGAATATTGTATCGGTTGGACTCTAAGCCGTGGAAAGAGTCGTGTTCTTCAATCGAATACCCAAGAGGAGCTTGGGGAGTGGAATGGCGTCACATA
CAGAGATTGGAGTAAGAAAGAGACCAAGGACGAGATCTTCTGGGGGCCGGACAAAAAAGGGATCTTTTCTGTCAAGAGTGCCTACCACCTAGCAATTGAATCTAGAGATG
CCCAAGAAGCCTCCCAATCGGATAAAAGCAAGCAGTCCTCCTTCTGGAACAGCATCTGGAACACCAAAATCCTCCCTCGGGCCAAAGTTTGCTCATGGAAGATCATTAAT
GACGCTATTCCGTGCAAGGCCAACGTTTTTAACAAGGGAGTTCTTCTCAACCCTCTCTGTCCTTTATGCCAAAAGTTTGTTGAATCCACCCCTCATATTATATGGGAGTG
CAAAATTATCAAAAAGTTTTGGGAAGAGGCTATTCCGAAAACTAAATCTTTGTTCAATTGTGGCAGGGAAAATTGGAATCCTAAAGATTATTGGAGCTGGATGAGAGATA
ACCTTTCAAAAGAAGAGTTGGAAAGAAGCCTTATTGCCATGTGGAGCGTGTGGAATTTTAGAAACAAAACAGAACATTCTCAAGTCATTCCATCAGCAGATTCTCTCCAT
AAAAGCTTCGAAAAGAATGTCAAGGATTGGGAAGATACAAACCTGGAAGAGCATCATCCAGTGAGCAGGCCTAGGAGCCAGGCGAGTCAAGATTCGTGGGAAGCCCCGGC
GCAAAATTCGTGGAAATTGAACTCCGATGCAGCGTGGAATGAAGTTGCGAACTGTGGAGGAATTGGGTGGGTCGTTCATGACTCGAACGGATCCTTGATCTGCAGCGGAT
CGAAACGCATCAAGAGAAATTGGTCAATAAAATCCTTGGAAGCAAAAGCAATTTTAGAGGGGGTTAAGATGATCGAGTATACATGCTTTCGTCAAAGAATCCCCCTCGAA
ATTGAATCGGATGCGCTCGAAATCATCAGAGCGTTGAAGGGAGAATCTGAAGATCTCTCTGAGTCGAAGGTCATCTTAGATGAAATCATCAGTCTCGTTTCGCGGCTGGT
CTCGGTGGATTTCCGCCATTATCGAAGGTCTTCGAACACAGTAGCCCACTGTGTAGCGAGAAACGCTTGTAATCTTCATTTTCGTTTTGGCCAGGAGGCTCCCCTCTCGC
GGGAAAATGGGTTTCATTTTGTAGCCCCTGGCATCGTGGTGAACCCGACGTTTTGTAATCCCTCTGGTTCTCTGAGGGTTGGTGGTTAG
Protein sequenceShow/hide protein sequence
MLPEKEYCIGWTLSRGKSRVLQSNTQEELGEWNGVTYRDWSKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIIN
DAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLH
KSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLE
IESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNLHFRFGQEAPLSRENGFHFVAPGIVVNPTFCNPSGSLRVGG