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Spg010793 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010793
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionG-patch domain-containing protein
Genome locationscaffold10:7076297..7079810
RNA-Seq ExpressionSpg010793
SyntenySpg010793
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]2.6e-2363.04Show/hide
Query:  LEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        + E S  +LKPK LTI Y EKP  PN   +PITI +P PFEYKSSKAVPW YE KVTVG    S PLP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  LEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]2.7e-1244.44Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNV
        FGLGYKPS+ D+I+    E+ KRL+R E+ E  Y    +P L  +F  AG IH E    +V+ A+ E++++  P VY CP+ FEL+NW+V
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNV

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]5.8e-2364.44Show/hide
Query:  ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        E S  +LKPK LTI Y EKP+ PN   +PITI +P PFEYKSSKAVPW Y+ KVTVG    S PLPI NI+G+GGLT +G+CYTP+ LLK
Subjt:  ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]6.6e-1949.5Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNVMELPSFVNEI
        FGLGYKPS+ D+I+    E+ KRL+R E+ E  Y   I+P L  +F  AG IH E  + +V+ A+ E++++ GP VYLCP+ FEL+NW+V++LPSFVN  
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNVMELPSFVNEI

Query:  S
        S
Subjt:  S

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.3e-2255.05Show/hide
Query:  MAQLPQYGEVDILE-----ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGK
        + Q  Q   +D++E     E S  + KPKPLT+ YREKP  P++  RPITIQ+P PFEY SSKAVPW YE KVTVG    S  LP+ NI+  GG+T +G+
Subjt:  MAQLPQYGEVDILE-----ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGK

Query:  CYTPEDLLK
        CYTPE LLK
Subjt:  CYTPEDLLK

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]9.8e-2361.29Show/hide
Query:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        ++ E S  S+KPK LTI YREKP  P+   +PITI +P PFEYKSSKAVPW YE KVTVG    S  LP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]5.1e-1141.11Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAV-MAIIEQKKEAGPLVYLCPEDFELNNWNV
        FGLGYKP++ D+I+    E+ KRL+R E+ E  Y    +P L  +   AG IH E  + +V  A+ E++++  P VY CP+ F+L+NW+V
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAV-MAIIEQKKEAGPLVYLCPEDFELNNWNV

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]1.3e-2261.29Show/hide
Query:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        ++ E S  SLKPKPLTI YREKP  P+   +P  I +P PFEYKSSKAVPW YE KVTVG    S  LP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H1.3e-2363.04Show/hide
Query:  LEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        + E S  +LKPK LTI Y EKP  PN   +PITI +P PFEYKSSKAVPW YE KVTVG    S PLP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  LEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

A0A6J1CNY7 Ribonuclease H1.3e-1244.44Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNV
        FGLGYKPS+ D+I+    E+ KRL+R E+ E  Y    +P L  +F  AG IH E    +V+ A+ E++++  P VY CP+ FEL+NW+V
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNV

A0A6J1CNY7 Ribonuclease H2.8e-2364.44Show/hide
Query:  ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        E S  +LKPK LTI Y EKP+ PN   +PITI +P PFEYKSSKAVPW Y+ KVTVG    S PLPI NI+G+GGLT +G+CYTP+ LLK
Subjt:  ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

A0A6J1D099 Ribonuclease H3.2e-1949.5Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNVMELPSFVNEI
        FGLGYKPS+ D+I+    E+ KRL+R E+ E  Y   I+P L  +F  AG IH E  + +V+ A+ E++++ GP VYLCP+ FEL+NW+V++LPSFVN  
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVM-AIIEQKKEAGPLVYLCPEDFELNNWNVMELPSFVNEI

Query:  S
        S
Subjt:  S

A0A6J1D099 Ribonuclease H6.2e-2355.05Show/hide
Query:  MAQLPQYGEVDILE-----ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGK
        + Q  Q   +D++E     E S  + KPKPLT+ YREKP  P++  RPITIQ+P PFEY SSKAVPW YE KVTVG    S  LP+ NI+  GG+T +G+
Subjt:  MAQLPQYGEVDILE-----ECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGK

Query:  CYTPEDLLK
        CYTPE LLK
Subjt:  CYTPEDLLK

A0A6J1D7C7 Ribonuclease H4.8e-2361.29Show/hide
Query:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        ++ E S  S+KPK LTI YREKP  P+   +PITI +P PFEYKSSKAVPW YE KVTVG    S  LP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

A0A6J1D7C7 Ribonuclease H2.5e-1141.11Show/hide
Query:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAV-MAIIEQKKEAGPLVYLCPEDFELNNWNV
        FGLGYKP++ D+I+    E+ KRL+R E+ E  Y    +P L  +   AG IH E  + +V  A+ E++++  P VY CP+ F+L+NW+V
Subjt:  FGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAV-MAIIEQKKEAGPLVYLCPEDFELNNWNV

A0A6J1D7C7 Ribonuclease H6.2e-2361.29Show/hide
Query:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK
        ++ E S  SLKPKPLTI YREKP  P+   +P  I +P PFEYKSSKAVPW YE KVTVG    S  LP+ NI+G+GGLT +G+CYTP+ LLK
Subjt:  ILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVG----SEPLPIHNISGIGGLTGSGKCYTPEDLLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAGCTCCCTCAGTATGGGGAAGTTGATATTTTAGAAGAATGCTCAAGGTTTTCTCTCAAGCCAAAACCGTTAACAATTTCTTATCGCGAGAAGCCCAGTACCCC
AAATTCCAAGCCAAGACCGATTACCATCCAGATTCCGACTCCCTTTGAATATAAAAGTTCAAAAGCAGTACCTTGGAATTATGAATATAAGGTAACTGTTGGTTCTGAAC
CCCTTCCAATCCATAATATCAGTGGGATAGGAGGTCTAACAGGAAGCGGGAAGTGCTATACACCAGAAGACCTATTGAAACCCAAGGGAGGGATTTTCCTTCGATTTGTA
TGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGTAGTCTTAGAGTCATACT
GGTGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCCGTGAGTCGAAGTATCAAA
TGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTAAAGACCCTGCAGTCATGGCTATAATCGAACAGAAGAAAGAAGCTGGT
CCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGAATGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAGCTCCCTCAGTATGGGGAAGTTGATATTTTAGAAGAATGCTCAAGGTTTTCTCTCAAGCCAAAACCGTTAACAATTTCTTATCGCGAGAAGCCCAGTACCCC
AAATTCCAAGCCAAGACCGATTACCATCCAGATTCCGACTCCCTTTGAATATAAAAGTTCAAAAGCAGTACCTTGGAATTATGAATATAAGGTAACTGTTGGTTCTGAAC
CCCTTCCAATCCATAATATCAGTGGGATAGGAGGTCTAACAGGAAGCGGGAAGTGCTATACACCAGAAGACCTATTGAAACCCAAGGGAGGGATTTTCCTTCGATTTGTA
TGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGTAGTCTTAGAGTCATACT
GGTGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCCGTGAGTCGAAGTATCAAA
TGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTAAAGACCCTGCAGTCATGGCTATAATCGAACAGAAGAAAGAAGCTGGT
CCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGAATGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA
Protein sequenceShow/hide protein sequence
MAQLPQYGEVDILEECSRFSLKPKPLTISYREKPSTPNSKPRPITIQIPTPFEYKSSKAVPWNYEYKVTVGSEPLPIHNISGIGGLTGSGKCYTPEDLLKPKGGIFLRFV
WDPWGGVKGIPFILLLSENSPKGSHKSPASSSLRVILVFGLGYKPSKKDMIKAHRQEREKRLARLESRESKYQMNIIPHLHDTFIFAGIIHPESKDPAVMAIIEQKKEAG
PLVYLCPEDFELNNWNVMELPSFVNEISK