; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg010837 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg010837
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold10:6555371..6559633
RNA-Seq ExpressionSpg010837
SyntenySpg010837
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL69050.1 hypothetical protein [Colocasia esculenta]2.5e-1635.15Show/hide
Query:  GYLQKLKDSGAQDLEELIDQVDPPFTEEKYMSVEELLKSKKSER--EHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEI
        G+LQ  +  G Q L  L + +      +++ + EE L + ++E+  +  +   SD+DS +D+K+     GR   D     + F  YTP ++  +QIL EI
Subjt:  GYLQKLKDSGAQDLEELIDQVDPPFTEEKYMSVEELLKSKKSER--EHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEI

Query:  RNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAGAEPYH
        RN   +  P++++S+P  RD+++YC FHRDHGH T  C +LKDEIE LI+ GYL +F  +   ++ RPR+R+ WT   +P+  + +      E  + PY 
Subjt:  RNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAGAEPYH

Query:  TS
        TS
Subjt:  TS

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]8.6e-1739.76Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E   KR +    +   DK Q +    R R  + D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH 
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG
        DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q     +    S    +RT    P +E E+G
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.1e-1941.57Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHR
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG
        DHGH+T++C  LK+E+E LIR GYLKE+  + +A Q     +    S    +RT    P +E E+G
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.1e-1940.79Show/hide
Query:  EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQ
        +KYMS EE       L+ K+++++ +R       S+ +K+ R          + D  +KFEKYTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +
Subjt:  EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQ

Query:  YCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWT
        YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A   R    +  T
Subjt:  YCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWT

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.1e-1638.79Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHR
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA
        DH H+T++   LK+E+E LIR GYL+E+  + +A Q    ++    S    +RT    P+    A
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128054.2e-1739.76Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E   KR +    +   DK Q +    R R  + D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH 
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG
        DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q     +    S    +RT    P +E E+G
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG

A0A6J1DWY0 uncharacterized protein LOC1110252935.2e-2041.57Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHR
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG
        DHGH+T++C  LK+E+E LIR GYLKE+  + +A Q     +    S    +RT    P +E E+G
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG

A0A6J1DYL6 uncharacterized protein LOC1110257855.4e-1738.79Show/hide
Query:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR
        ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHR
Subjt:  EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA
        DH H+T++   LK+E+E LIR GYL+E+  + +A Q    ++    S    +RT    P+    A
Subjt:  DHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA

A0A6J1DZ52 uncharacterized protein LOC1110256125.2e-2040.79Show/hide
Query:  EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQ
        +KYMS EE       L+ K+++++ +R       S+ +K+ R          + D  +KFEKYTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +
Subjt:  EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQ

Query:  YCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWT
        YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A   R    +  T
Subjt:  YCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWT

A0A7N2N9G0 Reverse transcriptase1.3e-1539.42Show/hide
Query:  KYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDD---HGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLF
        KYM+ E+ L +++ +   +     +   +  KK RT D     R RP  G    +F  +TP + P +Q+LM+I++   L  P KLKS+P+ R + +YC F
Subjt:  KYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDD---HGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLF

Query:  HRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEAD
        HRDHGH T +C  LK +IE LIR G L+ F +K  AD
Subjt:  HRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTTGGCTCGTTGTGTAATTGGAGTCACAACAGGTGTAGTGATCGGCGTTGAAGGATTTGAAATAGGAGGAGTGAGAGGTCCAGATGAAGAAGATGAAGAGGA
ATCTGCTAGCAGCTCGTGCAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGGAAGCGTGCCTCGACTACCAATCATCACATTCTTCTGTTTTACAGCTAATTTTGGACC
ACCATATGCAAGGAGCTGACGAGGACAATCGGGCGGAGATAGGACCAGGAAGTGACCCAGAGGAAGACCAGCCAACGGGCCGAGCCAAAATGACCCGACCCAAGGCCGAG
GCCGACCACTCGGCCCGCTTGCGTGGGCCGAGTTCGTTTGCATTCGCTCGGTCCCTGCTACCTCTAGCTGCCCCGGTCCAGCTTGTTGGCGCCGTCTGTGGGGAAGAAAG
CTTGCCAAATCTGCATATCGGTCACTCCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACAGG
AAGAAGGCCAAGATCGGCCTCAGACTGAATCTCCTCGTCCTCGATCTCCACTACCCTCTTCCCGAGAGAAGCAAGCTGATCTCAAAACTGCTGCTCTCGAAAACAAAGTA
AGTGCGATGGATCAAAATTTGTCCAGGATACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGA
GCCCATGGAGCACACTGCAGAATTAGAGACGAGATCGAAGGGAAAGAAGACTGACAACATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACACTTAAAGGAC
GTGACTACACAATTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGTGCAGATGTGCCAAAACTGCCGAGTCCGAGGCCAGAGCT
GCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAA
CACACTAAAGGAGCTTAGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCATTCACAGAAG
AAAAATACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTTTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACC
GACGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATAC
AAACCTACTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTA
AGCTAAAGGACGAGATTGAAATACTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCTAGGCAAAGACAAGGGTGGACCTCA
ACTGGAAATCCGTTGAGGACCAAGACAGACTCTCCTATGGTCGAGGCCGAGGCTGGGGCCGAGCCCTATCACACTTCATGCCAGGGTCAAGGACAGCATTCTGGAGAACA
CACTAAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTTTGGCTCGTTGTGTAATTGGAGTCACAACAGGTGTAGTGATCGGCGTTGAAGGATTTGAAATAGGAGGAGTGAGAGGTCCAGATGAAGAAGATGAAGAGGA
ATCTGCTAGCAGCTCGTGCAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGGAAGCGTGCCTCGACTACCAATCATCACATTCTTCTGTTTTACAGCTAATTTTGGACC
ACCATATGCAAGGAGCTGACGAGGACAATCGGGCGGAGATAGGACCAGGAAGTGACCCAGAGGAAGACCAGCCAACGGGCCGAGCCAAAATGACCCGACCCAAGGCCGAG
GCCGACCACTCGGCCCGCTTGCGTGGGCCGAGTTCGTTTGCATTCGCTCGGTCCCTGCTACCTCTAGCTGCCCCGGTCCAGCTTGTTGGCGCCGTCTGTGGGGAAGAAAG
CTTGCCAAATCTGCATATCGGTCACTCCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACAGG
AAGAAGGCCAAGATCGGCCTCAGACTGAATCTCCTCGTCCTCGATCTCCACTACCCTCTTCCCGAGAGAAGCAAGCTGATCTCAAAACTGCTGCTCTCGAAAACAAAGTA
AGTGCGATGGATCAAAATTTGTCCAGGATACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGA
GCCCATGGAGCACACTGCAGAATTAGAGACGAGATCGAAGGGAAAGAAGACTGACAACATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACACTTAAAGGAC
GTGACTACACAATTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGTGCAGATGTGCCAAAACTGCCGAGTCCGAGGCCAGAGCT
GCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAA
CACACTAAAGGAGCTTAGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCATTCACAGAAG
AAAAATACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTTTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACC
GACGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATAC
AAACCTACTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTA
AGCTAAAGGACGAGATTGAAATACTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCTAGGCAAAGACAAGGGTGGACCTCA
ACTGGAAATCCGTTGAGGACCAAGACAGACTCTCCTATGGTCGAGGCCGAGGCTGGGGCCGAGCCCTATCACACTTCATGCCAGGGTCAAGGACAGCATTCTGGAGAACA
CACTAAACCTTAA
Protein sequenceShow/hide protein sequence
MGALARCVIGVTTGVVIGVEGFEIGGVRGPDEEDEEESASSSCRANNCLQDSALEACLDYQSSHSSVLQLILDHHMQGADEDNRAEIGPGSDPEEDQPTGRAKMTRPKAE
ADHSARLRGPSSFAFARSLLPLAAPVQLVGAVCGEESLPNLHIGHSMSKGMEKRNLDINTENSDGDRHQRRSQEEGQDRPQTESPRPRSPLPSSREKQADLKTAALENKV
SAMDQNLSRILRILDKPGPSTKTYDERLVRDPRKGKEPMEHTAELETRSKGKKTDNMTSKIRGLKPTDRTLKGRDYTISTPSYGHTKTDLRNLIEEKCRCAKTAESEARA
AEAEARATEAEARAAEARLAEAEAKKDNPPWKTELLNTLKELRNPQGYLQKLKDSGAQDLEELIDQVDPPFTEEKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRT
DDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTS
TGNPLRTKTDSPMVEAEAGAEPYHTSCQGQGQHSGEHTKP